RNA–Protein interactions for RNA: ENST00000420646.6

SNCA-206, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 3,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-206ENST00000420646 CALUO43852 315 aaPredicted RBP9.65□□□□□ -0.86
SNCA-206ENST00000420646 KIF20AO95235 890 aa9.65□□□□□ -0.86
SNCA-206ENST00000420646 AFPP02771 609 aaKnown RBP9.65□□□□□ -0.86
SNCA-206ENST00000420646 UCHL3P15374 230 aa9.65□□□□□ -0.86
SNCA-206ENST00000420646 HNRNPH3P31942 346 aaKnown RBP9.65□□□□□ -0.86
SNCA-206ENST00000420646 YWHABP31946 246 aaKnown RBP9.65□□□□□ -0.86
SNCA-206ENST00000420646 CNTN2Q02246 1040 aa9.65□□□□□ -0.86
SNCA-206ENST00000420646 EXOC3L4Q17RC7 722 aa9.65□□□□□ -0.86
SNCA-206ENST00000420646 DPY19L2P1Q6NXN4 242 aa9.65□□□□□ -0.86
SNCA-206ENST00000420646 COG1Q8WTW3 980 aa9.65□□□□□ -0.86
SNCA-206ENST00000420646 RIT2Q99578 217 aa9.65□□□□□ -0.86
SNCA-206ENST00000420646 CBWD1Q9BRT8 395 aa9.65□□□□□ -0.86
SNCA-206ENST00000420646 GANQ9H2C0 597 aa9.65□□□□□ -0.86
SNCA-206ENST00000420646 ANKZF1Q9H8Y5 726 aa9.65□□□□□ -0.86
SNCA-206ENST00000420646 CEP72Q9P209 647 aa9.65□□□□□ -0.86
SNCA-206ENST00000420646 PACSIN2Q9UNF0 486 aaPredicted RBP9.65□□□□□ -0.86
SNCA-206ENST00000420646 KIF13BQ9NQT8 1826 aa9.65□□□□□ -0.86
SNCA-206ENST00000420646 POLR2AP24928 1970 aaKnown RBP9.65□□□□□ -0.86
SNCA-206ENST00000420646 FRMPD4Q14CM0 1322 aa9.65□□□□□ -0.87
SNCA-206ENST00000420646 MYH10P35580 1976 aa9.65□□□□□ -0.87
SNCA-206ENST00000420646 GOLGA8IPA6NC78 632 aa9.65□□□□□ -0.87
SNCA-206ENST00000420646 GOLGA8JA6NMD2 632 aa9.65□□□□□ -0.87
SNCA-206ENST00000420646 SLC16A4O15374 487 aa9.65□□□□□ -0.87
SNCA-206ENST00000420646 P4HBP07237 508 aaKnown RBP9.65□□□□□ -0.87
SNCA-206ENST00000420646 NR3C2P08235 984 aa9.65□□□□□ -0.87
SNCA-206ENST00000420646 QARSP47897 775 aaKnown RBP9.65□□□□□ -0.87
SNCA-206ENST00000420646 MARSP56192 900 aaKnown RBP9.65□□□□□ -0.87
SNCA-206ENST00000420646 PEX3P56589 373 aa9.65□□□□□ -0.87
SNCA-206ENST00000420646 PTK2Q05397 1052 aa9.65□□□□□ -0.87
SNCA-206ENST00000420646 ASTE1Q2TB18 679 aaPredicted RBP9.65□□□□□ -0.87
SNCA-206ENST00000420646 FAM186BQ8IYM0 893 aa9.65□□□□□ -0.87
SNCA-206ENST00000420646 GOLGA1Q92805 767 aa9.65□□□□□ -0.87
SNCA-206ENST00000420646 SECISBP2LQ93073 1101 aaKnown RBP9.65□□□□□ -0.87
SNCA-206ENST00000420646 AGPAT3Q9NRZ7 376 aa9.65□□□□□ -0.87
SNCA-206ENST00000420646 GCNT4Q9P109 453 aa9.65□□□□□ -0.87
SNCA-206ENST00000420646 ATAD5Q96QE3 1844 aa9.64□□□□□ -0.87
SNCA-206ENST00000420646 SASH3O75995 380 aa9.64□□□□□ -0.87
SNCA-206ENST00000420646 GNA14O95837 355 aa9.64□□□□□ -0.87
SNCA-206ENST00000420646 MATR3P43243 847 aaKnown RBP eCLIP9.64□□□□□ -0.87
SNCA-206ENST00000420646 KLHL30Q0D2K2 578 aa9.64□□□□□ -0.87
SNCA-206ENST00000420646 FAM102BQ5T8I3 360 aa9.64□□□□□ -0.87
SNCA-206ENST00000420646 DCAF15Q66K64 600 aa9.64□□□□□ -0.87
SNCA-206ENST00000420646 NFRKBQ6P4R8 1299 aa9.64□□□□□ -0.87
SNCA-206ENST00000420646 ZC3H3Q8IXZ2 948 aaKnown RBP9.64□□□□□ -0.87
SNCA-206ENST00000420646 GDAP1L1Q96MZ0 367 aa9.64□□□□□ -0.87
SNCA-206ENST00000420646 SPAG5Q96R06 1193 aa9.64□□□□□ -0.87
SNCA-206ENST00000420646 EPB41P11171 864 aaKnown RBP9.64□□□□□ -0.87
SNCA-206ENST00000420646 RNASE9P60153 205 aaKnown RBP9.64□□□□□ -0.87
SNCA-206ENST00000420646 SP2Q02086 613 aa9.64□□□□□ -0.87
SNCA-206ENST00000420646 SLC9C1Q4G0N8 1177 aa9.64□□□□□ -0.87
SNCA-206ENST00000420646 XKR9Q5GH70 373 aa9.64□□□□□ -0.87
SNCA-206ENST00000420646 KLHDC7AQ5VTJ3 777 aa9.64□□□□□ -0.87
SNCA-206ENST00000420646 PPP4R3CPQ6ZMV5 832 aa9.64□□□□□ -0.87
SNCA-206ENST00000420646 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.64□□□□□ -0.87
SNCA-206ENST00000420646 ANO5Q75V66 913 aa9.64□□□□□ -0.87
SNCA-206ENST00000420646 EEPD1Q7L9B9 569 aa9.64□□□□□ -0.87
SNCA-206ENST00000420646 TRAPPC11Q7Z392 1133 aa9.64□□□□□ -0.87
SNCA-206ENST00000420646 FRMD5Q7Z6J6 570 aa9.64□□□□□ -0.87
SNCA-206ENST00000420646 REPS2Q8NFH8 660 aa9.64□□□□□ -0.87
SNCA-206ENST00000420646 A1CFQ9NQ94 594 aaKnown RBP9.64□□□□□ -0.87
SNCA-206ENST00000420646 TCEAL9Q9UHQ7 104 aa9.64□□□□□ -0.87
SNCA-206ENST00000420646 SAR1BQ9Y6B6 198 aa9.64□□□□□ -0.87
SNCA-206ENST00000420646 TMCO5BA8MYB1 307 aa9.63□□□□□ -0.87
SNCA-206ENST00000420646 ZNF862O60290 1169 aa9.63□□□□□ -0.87
SNCA-206ENST00000420646 EXOC3O60645 756 aa9.63□□□□□ -0.87
SNCA-206ENST00000420646 USP2O75604 605 aaPredicted RBP9.63□□□□□ -0.87
SNCA-206ENST00000420646 ZNF131P52739 623 aa9.63□□□□□ -0.87
SNCA-206ENST00000420646 USP14P54578 494 aa9.63□□□□□ -0.87
SNCA-206ENST00000420646 VGLL4Q14135 290 aa9.63□□□□□ -0.87
SNCA-206ENST00000420646 BMT2Q1RMZ1 405 aa9.63□□□□□ -0.87
SNCA-206ENST00000420646 ZNF571Q7Z3V5 609 aaPredicted RBP9.63□□□□□ -0.87
SNCA-206ENST00000420646 VSIG10LQ86VR7 867 aa9.63□□□□□ -0.87
SNCA-206ENST00000420646 BORCS6Q96GS4 357 aa9.63□□□□□ -0.87
SNCA-206ENST00000420646 CLMNQ96JQ2 1002 aa9.63□□□□□ -0.87
SNCA-206ENST00000420646 CCDC43Q96MW1 224 aaKnown RBP9.63□□□□□ -0.87
SNCA-206ENST00000420646 GBP3Q9H0R5 595 aa9.63□□□□□ -0.87
SNCA-206ENST00000420646 ZNF112Q9UJU3 913 aa9.63□□□□□ -0.87
SNCA-206ENST00000420646 GFPT2O94808 682 aa9.63□□□□□ -0.87
SNCA-206ENST00000420646 GAP43P17677 238 aa9.63□□□□□ -0.87
SNCA-206ENST00000420646 RPL13P26373 211 aaKnown RBP9.63□□□□□ -0.87
SNCA-206ENST00000420646 KLRC1P26715 233 aa9.63□□□□□ -0.87
SNCA-206ENST00000420646 DSG3P32926 999 aa9.63□□□□□ -0.87
SNCA-206ENST00000420646 CDK17Q00537 523 aa9.63□□□□□ -0.87
SNCA-206ENST00000420646 SWSAP1Q6NVH7 229 aa9.63□□□□□ -0.87
SNCA-206ENST00000420646 IRF2BP2Q7Z5L9 587 aa9.63□□□□□ -0.87
SNCA-206ENST00000420646 ZNF784Q8NCA9 323 aaPredicted RBP9.63□□□□□ -0.87
SNCA-206ENST00000420646 SIX2Q9NPC8 291 aa9.63□□□□□ -0.87
SNCA-206ENST00000420646 GABBR1Q9UBS5 961 aa9.63□□□□□ -0.87
SNCA-206ENST00000420646 SSC5DA1L4H1 1573 aa9.63□□□□□ -0.87
SNCA-206ENST00000420646 CTAGE15A4D2H0 777 aa9.62□□□□□ -0.87
SNCA-206ENST00000420646 CCDC169A6NNP5 214 aa9.62□□□□□ -0.87
SNCA-206ENST00000420646 SPDYE16A6NNV3 312 aaPredicted RBP9.62□□□□□ -0.87
SNCA-206ENST00000420646 FTCDO95954 541 aa9.62□□□□□ -0.87
SNCA-206ENST00000420646 CTAGE8P0CG41 777 aa9.62□□□□□ -0.87
SNCA-206ENST00000420646 BCRP11274 1271 aa9.62□□□□□ -0.87
SNCA-206ENST00000420646 PSMC2P35998 433 aaKnown RBP9.62□□□□□ -0.87
SNCA-206ENST00000420646 ARHGAP44Q17R89 818 aa9.62□□□□□ -0.87
SNCA-206ENST00000420646 KIAA0753Q2KHM9 967 aa9.62□□□□□ -0.87
SNCA-206ENST00000420646 IQCEQ6IPM2 695 aa9.62□□□□□ -0.87
SNCA-206ENST00000420646 TMCO3Q6UWJ1 677 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms