RNA–Protein interactions for RNA: ENST00000420503.1

LINC00339-203, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-203ENST00000420503 RASEFQ8IZ41 740 aa14.66□□□□□ -0.06
LINC00339-203ENST00000420503 TMTC2Q8N394 836 aa14.66□□□□□ -0.06
LINC00339-203ENST00000420503 PHF7Q9BWX1 381 aaPredicted RBP14.66□□□□□ -0.06
LINC00339-203ENST00000420503 S1PR5Q9H228 398 aa14.66□□□□□ -0.06
LINC00339-203ENST00000420503 ANO2Q9NQ90 1003 aa14.66□□□□□ -0.06
LINC00339-203ENST00000420503 ZNF302Q9NR11 478 aa14.66□□□□□ -0.06
LINC00339-203ENST00000420503 ZFHX2Q9C0A1 2572 aaPredicted RBP14.65□□□□□ -0.06
LINC00339-203ENST00000420503 HBP1O60381 514 aa14.65□□□□□ -0.06
LINC00339-203ENST00000420503 WEE2P0C1S8 567 aa14.65□□□□□ -0.06
LINC00339-203ENST00000420503 FGFR4P22455 802 aa14.65□□□□□ -0.06
LINC00339-203ENST00000420503 EXOSC10Q01780 885 aaKnown RBP14.65□□□□□ -0.06
LINC00339-203ENST00000420503 KANK3Q6NY19 840 aa14.65□□□□□ -0.06
LINC00339-203ENST00000420503 SLC24A5Q71RS6 500 aa14.65□□□□□ -0.06
LINC00339-203ENST00000420503 BMP8AQ7Z5Y6 402 aa14.65□□□□□ -0.06
LINC00339-203ENST00000420503 LRRC71Q8N4P6 559 aa14.65□□□□□ -0.06
LINC00339-203ENST00000420503 RASGRP4Q8TDF6 673 aa14.65□□□□□ -0.06
LINC00339-203ENST00000420503 CRYGNQ8WXF5 182 aa14.65□□□□□ -0.06
LINC00339-203ENST00000420503 GJA10Q969M2 543 aa14.65□□□□□ -0.06
LINC00339-203ENST00000420503 PPP2R3CQ969Q6 453 aa14.65□□□□□ -0.06
LINC00339-203ENST00000420503 CASD1Q96PB1 797 aa14.65□□□□□ -0.06
LINC00339-203ENST00000420503 KCNH6Q9H252 994 aa14.65□□□□□ -0.06
LINC00339-203ENST00000420503 PCDHB12Q9Y5F1 795 aa14.65□□□□□ -0.06
LINC00339-203ENST00000420503 CFAP54Q96N23 3096 aa14.64□□□□□ -0.07
LINC00339-203ENST00000420503 EDIL3O43854 480 aa14.64□□□□□ -0.07
LINC00339-203ENST00000420503 CSDE1O75534 798 aaKnown RBP14.64□□□□□ -0.07
LINC00339-203ENST00000420503 ZNF76P36508 570 aa14.64□□□□□ -0.07
LINC00339-203ENST00000420503 TECP42680 631 aa14.64□□□□□ -0.07
LINC00339-203ENST00000420503 CLLU1OSQ5K130 101 aa14.64□□□□□ -0.07
LINC00339-203ENST00000420503 ANKRD54Q6NXT1 300 aa14.64□□□□□ -0.07
LINC00339-203ENST00000420503 NME8Q8N427 588 aa14.64□□□□□ -0.07
LINC00339-203ENST00000420503 FBXL6Q8N531 539 aa14.64□□□□□ -0.07
LINC00339-203ENST00000420503 METTL13Q8N6R0 699 aa14.64□□□□□ -0.07
LINC00339-203ENST00000420503 TCF25Q9BQ70 676 aa14.64□□□□□ -0.07
LINC00339-203ENST00000420503 BARHL2Q9NY43 387 aa14.64□□□□□ -0.07
LINC00339-203ENST00000420503 PTPRZ1P23471 2315 aaPredicted RBP14.64□□□□□ -0.07
LINC00339-203ENST00000420503 PLXNA3P51805 1871 aa14.63□□□□□ -0.07
LINC00339-203ENST00000420503 KLF18A0A0U1RQI7 1052 aa14.63□□□□□ -0.07
LINC00339-203ENST00000420503 GOLGA8AA7E2F4 631 aa14.63□□□□□ -0.07
LINC00339-203ENST00000420503 GOLGA8BA8MQT2 603 aa14.63□□□□□ -0.07
LINC00339-203ENST00000420503 IPO5O00410 1097 aaKnown RBP14.63□□□□□ -0.07
LINC00339-203ENST00000420503 ZBTB43O43298 467 aa14.63□□□□□ -0.07
LINC00339-203ENST00000420503 FAM189BP81408 668 aa14.63□□□□□ -0.07
LINC00339-203ENST00000420503 UGCGQ16739 394 aa14.63□□□□□ -0.07
LINC00339-203ENST00000420503 FAM160B1Q5W0V3 765 aa14.63□□□□□ -0.07
LINC00339-203ENST00000420503 PPP1R18Q6NYC8 613 aa14.63□□□□□ -0.07
LINC00339-203ENST00000420503 MIS18BP1Q6P0N0 1132 aa14.63□□□□□ -0.07
LINC00339-203ENST00000420503 CKAP2LQ8IYA6 745 aa14.63□□□□□ -0.07
LINC00339-203ENST00000420503 RNF169Q8NCN4 708 aa14.63□□□□□ -0.07
LINC00339-203ENST00000420503 NEK1Q96PY6 1258 aa14.63□□□□□ -0.07
LINC00339-203ENST00000420503 ADAMTS10Q9H324 1103 aa14.63□□□□□ -0.07
LINC00339-203ENST00000420503 ATP6V0A4Q9HBG4 840 aa14.63□□□□□ -0.07
LINC00339-203ENST00000420503 C1orf112Q9NSG2 853 aa14.63□□□□□ -0.07
LINC00339-203ENST00000420503 TMEM161AQ9NX61 479 aa14.63□□□□□ -0.07
LINC00339-203ENST00000420503 COL1A2P08123 1366 aa14.62□□□□□ -0.07
LINC00339-203ENST00000420503 TMEM150BA6NC51 233 aa14.62□□□□□ -0.07
LINC00339-203ENST00000420503 NT5C1B-RDH14C9J2C7 533 aa14.62□□□□□ -0.07
LINC00339-203ENST00000420503 ZNF862O60290 1169 aa14.62□□□□□ -0.07
LINC00339-203ENST00000420503 FOSP01100 380 aaPredicted RBP14.62□□□□□ -0.07
LINC00339-203ENST00000420503 RPLP2P05387 115 aaKnown RBP14.62□□□□□ -0.07
LINC00339-203ENST00000420503 ATF7P17544 494 aaPredicted RBP14.62□□□□□ -0.07
LINC00339-203ENST00000420503 ADD1P35611 737 aaKnown RBP14.62□□□□□ -0.07
LINC00339-203ENST00000420503 CRYBB1P53674 252 aaPredicted RBP14.62□□□□□ -0.07
LINC00339-203ENST00000420503 NLRP11P59045 1033 aaKnown RBP14.62□□□□□ -0.07
LINC00339-203ENST00000420503 UBE3AQ05086 875 aa14.62□□□□□ -0.07
LINC00339-203ENST00000420503 SIGLEC14Q08ET2 396 aa14.62□□□□□ -0.07
LINC00339-203ENST00000420503 AP3B2Q13367 1082 aa14.62□□□□□ -0.07
LINC00339-203ENST00000420503 DRP2Q13474 957 aa14.62□□□□□ -0.07
LINC00339-203ENST00000420503 PTPN21Q16825 1174 aa14.62□□□□□ -0.07
LINC00339-203ENST00000420503 ZNF484Q5JVG2 852 aa14.62□□□□□ -0.07
LINC00339-203ENST00000420503 KCNT2Q6UVM3 1135 aa14.62□□□□□ -0.07
LINC00339-203ENST00000420503 TMEM173Q86WV6 379 aaPredicted RBP14.62□□□□□ -0.07
LINC00339-203ENST00000420503 SUGP1Q8IWZ8 645 aaKnown RBP14.62□□□□□ -0.07
LINC00339-203ENST00000420503 LINC01465Q8N7H1 131 aa14.62□□□□□ -0.07
LINC00339-203ENST00000420503 AUTS2Q8WXX7 1259 aa14.62□□□□□ -0.07
LINC00339-203ENST00000420503 MRPS27Q92552 414 aaKnown RBP14.62□□□□□ -0.07
LINC00339-203ENST00000420503 LENG9Q96B70 501 aa14.62□□□□□ -0.07
LINC00339-203ENST00000420503 ZNF577Q9BSK1 485 aa14.62□□□□□ -0.07
LINC00339-203ENST00000420503 ENTPD7Q9NQZ7 604 aa14.62□□□□□ -0.07
LINC00339-203ENST00000420503 TSHZ2Q9NRE2 1034 aa14.62□□□□□ -0.07
LINC00339-203ENST00000420503 RBM28Q9NW13 759 aaKnown RBP14.62□□□□□ -0.07
LINC00339-203ENST00000420503 GABBR1Q9UBS5 961 aa14.62□□□□□ -0.07
LINC00339-203ENST00000420503 NAP1L2Q9ULW6 460 aaPredicted RBP14.62□□□□□ -0.07
LINC00339-203ENST00000420503 MAFBQ9Y5Q3 323 aaPredicted RBP14.62□□□□□ -0.07
LINC00339-203ENST00000420503 GPR182O15218 404 aa14.61□□□□□ -0.07
LINC00339-203ENST00000420503 LAG3P18627 525 aa14.61□□□□□ -0.07
LINC00339-203ENST00000420503 SLC26A2P50443 739 aa14.61□□□□□ -0.07
LINC00339-203ENST00000420503 PTPN5P54829 565 aa14.61□□□□□ -0.07
LINC00339-203ENST00000420503 PKN1Q16512 942 aa14.61□□□□□ -0.07
LINC00339-203ENST00000420503 LONRF3Q496Y0 759 aa14.61□□□□□ -0.07
LINC00339-203ENST00000420503 C12orf76Q8N812 135 aaPredicted RBP14.61□□□□□ -0.07
LINC00339-203ENST00000420503 SH2D3AQ9BRG2 576 aa14.61□□□□□ -0.07
LINC00339-203ENST00000420503 TMEM117Q9H0C3 514 aa14.61□□□□□ -0.07
LINC00339-203ENST00000420503 POMKQ9H5K3 350 aa14.61□□□□□ -0.07
LINC00339-203ENST00000420503 AAASQ9NRG9 546 aa14.61□□□□□ -0.07
LINC00339-203ENST00000420503 RIF1Q5UIP0 2472 aaKnown RBP14.61□□□□□ -0.07
LINC00339-203ENST00000420503 C2CD4DB7Z1M9 353 aa14.6□□□□□ -0.07
LINC00339-203ENST00000420503 H0Y858 1186 aa14.6□□□□□ -0.07
LINC00339-203ENST00000420503 ASGR2P07307 311 aa14.6□□□□□ -0.07
LINC00339-203ENST00000420503 AVPR2P30518 371 aa14.6□□□□□ -0.07
LINC00339-203ENST00000420503 PLCB3Q01970 1234 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms