RNA–Protein interactions for RNA: ENST00000419442.1

RAPGEF1-205, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-205ENST00000419442 MAD2L2Q9UI95 211 aa12.09□□□□□ -0.47
RAPGEF1-205ENST00000419442 IRAK3Q9Y616 596 aa12.09□□□□□ -0.47
RAPGEF1-205ENST00000419442 DENND3A2RUS2 1198 aa12.08□□□□□ -0.48
RAPGEF1-205ENST00000419442 RPS6KA5O75582 802 aa12.08□□□□□ -0.48
RAPGEF1-205ENST00000419442 MX1P20591 662 aa12.08□□□□□ -0.48
RAPGEF1-205ENST00000419442 VASPP50552 380 aaPredicted RBP12.08□□□□□ -0.48
RAPGEF1-205ENST00000419442 PHLDB3Q6NSJ2 640 aa12.08□□□□□ -0.48
RAPGEF1-205ENST00000419442 CCDC149Q6ZUS6 474 aa12.08□□□□□ -0.48
RAPGEF1-205ENST00000419442 GPR149Q86SP6 731 aa12.08□□□□□ -0.48
RAPGEF1-205ENST00000419442 LRRC43Q8N309 656 aa12.08□□□□□ -0.48
RAPGEF1-205ENST00000419442 TMEM40Q8WWA1 233 aa12.08□□□□□ -0.48
RAPGEF1-205ENST00000419442 CHD8Q9HCK8 2581 aa12.08□□□□□ -0.48
RAPGEF1-205ENST00000419442 PRR5-ARHGAP8B1AHC4 643 aa12.07□□□□□ -0.48
RAPGEF1-205ENST00000419442 B4E1Z4 1266 aa12.07□□□□□ -0.48
RAPGEF1-205ENST00000419442 HOXA2O43364 376 aa12.07□□□□□ -0.48
RAPGEF1-205ENST00000419442 NARSO43776 548 aaKnown RBP12.07□□□□□ -0.48
RAPGEF1-205ENST00000419442 EPCAMP16422 314 aa12.07□□□□□ -0.48
RAPGEF1-205ENST00000419442 IBSPP21815 317 aaPredicted RBP12.07□□□□□ -0.48
RAPGEF1-205ENST00000419442 PBX3P40426 434 aa12.07□□□□□ -0.48
RAPGEF1-205ENST00000419442 ARHGAP8P85298 464 aa12.07□□□□□ -0.48
RAPGEF1-205ENST00000419442 PLCB2Q00722 1185 aa12.07□□□□□ -0.48
RAPGEF1-205ENST00000419442 C1orf210Q8IVY1 113 aa12.07□□□□□ -0.48
RAPGEF1-205ENST00000419442 TRAPPC12Q8WVT3 735 aa12.07□□□□□ -0.48
RAPGEF1-205ENST00000419442 TNPO1Q92973 898 aaKnown RBP12.07□□□□□ -0.48
RAPGEF1-205ENST00000419442 CDHR1Q96JP9 859 aa12.07□□□□□ -0.48
RAPGEF1-205ENST00000419442 PIGSQ96S52 555 aa12.07□□□□□ -0.48
RAPGEF1-205ENST00000419442 RTKNQ9BST9 563 aa12.07□□□□□ -0.48
RAPGEF1-205ENST00000419442 TBC1D17Q9HA65 648 aa12.07□□□□□ -0.48
RAPGEF1-205ENST00000419442 CDHR5Q9HBB8 845 aa12.07□□□□□ -0.48
RAPGEF1-205ENST00000419442 ZSWIM5Q9P217 1185 aa12.07□□□□□ -0.48
RAPGEF1-205ENST00000419442 ST3GAL5Q9UNP4 418 aa12.07□□□□□ -0.48
RAPGEF1-205ENST00000419442 FRYLO94915 3013 aa12.07□□□□□ -0.48
RAPGEF1-205ENST00000419442 PIK3CDO00329 1044 aa12.06□□□□□ -0.48
RAPGEF1-205ENST00000419442 GPR182O15218 404 aa12.06□□□□□ -0.48
RAPGEF1-205ENST00000419442 CYTH3O43739 400 aa12.06□□□□□ -0.48
RAPGEF1-205ENST00000419442 KINO60870 393 aaKnown RBP12.06□□□□□ -0.48
RAPGEF1-205ENST00000419442 CFHP08603 1231 aa12.06□□□□□ -0.48
RAPGEF1-205ENST00000419442 ITGB5P18084 799 aa12.06□□□□□ -0.48
RAPGEF1-205ENST00000419442 LMNB2Q03252 620 aa12.06□□□□□ -0.48
RAPGEF1-205ENST00000419442 PLCB4Q15147 1175 aa12.06□□□□□ -0.48
RAPGEF1-205ENST00000419442 SEC23AQ15436 765 aa12.06□□□□□ -0.48
RAPGEF1-205ENST00000419442 VARS2Q5ST30 1063 aaKnown RBP12.06□□□□□ -0.48
RAPGEF1-205ENST00000419442 MTHFD1LQ6UB35 978 aa12.06□□□□□ -0.48
RAPGEF1-205ENST00000419442 HOMER1Q86YM7 354 aa12.06□□□□□ -0.48
RAPGEF1-205ENST00000419442 MAML2Q8IZL2 1156 aaPredicted RBP12.06□□□□□ -0.48
RAPGEF1-205ENST00000419442 ZBP1Q9H171 429 aa12.06□□□□□ -0.48
RAPGEF1-205ENST00000419442 SFXN1Q9H9B4 322 aa12.06□□□□□ -0.48
RAPGEF1-205ENST00000419442 ATRXP46100 2492 aa12.06□□□□□ -0.48
RAPGEF1-205ENST00000419442 CFAP47Q6ZTR5 3102 aa12.06□□□□□ -0.48
RAPGEF1-205ENST00000419442 FAM208BQ5VWN6 2430 aa12.06□□□□□ -0.48
RAPGEF1-205ENST00000419442 PNMA6FA0A0J9YX94 578 aa12.05□□□□□ -0.48
RAPGEF1-205ENST00000419442 ZNF213O14771 459 aa12.05□□□□□ -0.48
RAPGEF1-205ENST00000419442 SPTLC1O15269 473 aa12.05□□□□□ -0.48
RAPGEF1-205ENST00000419442 CXCL14O95715 111 aa12.05□□□□□ -0.48
RAPGEF1-205ENST00000419442 SRFP11831 508 aa12.05□□□□□ -0.48
RAPGEF1-205ENST00000419442 NMIQ13287 307 aaPredicted RBP12.05□□□□□ -0.48
RAPGEF1-205ENST00000419442 GIT2Q14161 759 aa12.05□□□□□ -0.48
RAPGEF1-205ENST00000419442 ZNF528Q3MIS6 628 aa12.05□□□□□ -0.48
RAPGEF1-205ENST00000419442 TMC5Q6UXY8 1006 aa12.05□□□□□ -0.48
RAPGEF1-205ENST00000419442 PLPPR4Q7Z2D5 763 aa12.05□□□□□ -0.48
RAPGEF1-205ENST00000419442 FAM228AQ86W67 206 aa12.05□□□□□ -0.48
RAPGEF1-205ENST00000419442 UBIAD1Q9Y5Z9 338 aa12.05□□□□□ -0.48
RAPGEF1-205ENST00000419442 POTEMA6NI47 508 aa12.04□□□□□ -0.48
RAPGEF1-205ENST00000419442 STK25O00506 426 aa12.04□□□□□ -0.48
RAPGEF1-205ENST00000419442 MEIS2O14770 477 aa12.04□□□□□ -0.48
RAPGEF1-205ENST00000419442 DCNP07585 359 aaKnown RBP12.04□□□□□ -0.48
RAPGEF1-205ENST00000419442 CTSAP10619 480 aa12.04□□□□□ -0.48
RAPGEF1-205ENST00000419442 TGM1P22735 817 aa12.04□□□□□ -0.48
RAPGEF1-205ENST00000419442 POLGP54098 1239 aaPredicted RBP12.04□□□□□ -0.48
RAPGEF1-205ENST00000419442 BMS1Q14692 1282 aaKnown RBP12.04□□□□□ -0.48
RAPGEF1-205ENST00000419442 GRM4Q14833 912 aa12.04□□□□□ -0.48
RAPGEF1-205ENST00000419442 LETM2Q2VYF4 491 aa12.04□□□□□ -0.48
RAPGEF1-205ENST00000419442 CLLU1OSQ5K130 101 aa12.04□□□□□ -0.48
RAPGEF1-205ENST00000419442 IFIT1BQ5T764 474 aaKnown RBP12.04□□□□□ -0.48
RAPGEF1-205ENST00000419442 POTEGQ6S5H5 508 aa12.04□□□□□ -0.48
RAPGEF1-205ENST00000419442 C15orf39Q6ZRI6 1047 aa12.04□□□□□ -0.48
RAPGEF1-205ENST00000419442 CABP7Q86V35 215 aa12.04□□□□□ -0.48
RAPGEF1-205ENST00000419442 KIAA0319LQ8IZA0 1049 aa12.04□□□□□ -0.48
RAPGEF1-205ENST00000419442 SLC44A3Q8N4M1 653 aa12.04□□□□□ -0.48
RAPGEF1-205ENST00000419442 NXPE3Q969Y0 559 aa12.04□□□□□ -0.48
RAPGEF1-205ENST00000419442 RHOBTB2Q9BYZ6 727 aa12.04□□□□□ -0.48
RAPGEF1-205ENST00000419442 NCDNQ9UBB6 729 aa12.04□□□□□ -0.48
RAPGEF1-205ENST00000419442 CDV3Q9UKY7 258 aaKnown RBP12.04□□□□□ -0.48
RAPGEF1-205ENST00000419442 SIT1Q9Y3P8 196 aa12.04□□□□□ -0.48
RAPGEF1-205ENST00000419442 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.03□□□□□ -0.48
RAPGEF1-205ENST00000419442 DCDC2BA2VCK2 349 aa12.03□□□□□ -0.48
RAPGEF1-205ENST00000419442 MAFGO15525 162 aa12.03□□□□□ -0.48
RAPGEF1-205ENST00000419442 N4BP1O75113 896 aaKnown RBP12.03□□□□□ -0.48
RAPGEF1-205ENST00000419442 GLULP15104 373 aa12.03□□□□□ -0.48
RAPGEF1-205ENST00000419442 RFX1P22670 979 aa12.03□□□□□ -0.48
RAPGEF1-205ENST00000419442 KLRC1P26715 233 aa12.03□□□□□ -0.48
RAPGEF1-205ENST00000419442 CRYBB1P53674 252 aaPredicted RBP12.03□□□□□ -0.48
RAPGEF1-205ENST00000419442 NONOQ15233 471 aaKnown RBP eCLIP12.03□□□□□ -0.48
RAPGEF1-205ENST00000419442 USP17L6PQ6QN14 398 aa12.03□□□□□ -0.48
RAPGEF1-205ENST00000419442 PPFIBP1Q86W92 1011 aa12.03□□□□□ -0.48
RAPGEF1-205ENST00000419442 ECHDC2Q86YB7 292 aa12.03□□□□□ -0.48
RAPGEF1-205ENST00000419442 VPS52Q8N1B4 723 aa12.03□□□□□ -0.48
RAPGEF1-205ENST00000419442 CMASQ8NFW8 434 aaPredicted RBP12.03□□□□□ -0.48
RAPGEF1-205ENST00000419442 SMARCC2Q8TAQ2 1214 aa12.03□□□□□ -0.48
RAPGEF1-205ENST00000419442 RSAD2Q8WXG1 361 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms