RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 KANK2Q63ZY3 851 aa3.61□□□□□ -1.83
VPS41-206ENST00000418457 MCTP2Q6DN12 878 aa3.61□□□□□ -1.83
VPS41-206ENST00000418457 GRAMD4Q6IC98 578 aa3.61□□□□□ -1.83
VPS41-206ENST00000418457 C1QL4Q86Z23 238 aa3.61□□□□□ -1.83
VPS41-206ENST00000418457 TP53I13Q8NBR0 393 aaPredicted RBP3.61□□□□□ -1.83
VPS41-206ENST00000418457 TXNDC5Q8NBS9 432 aaKnown RBP3.61□□□□□ -1.83
VPS41-206ENST00000418457 ADAMTS17Q8TE56 1095 aa3.61□□□□□ -1.83
VPS41-206ENST00000418457 COG1Q8WTW3 980 aa3.61□□□□□ -1.83
VPS41-206ENST00000418457 FERMT2Q96AC1 680 aa3.61□□□□□ -1.83
VPS41-206ENST00000418457 ZNF496Q96IT1 587 aaPredicted RBP3.61□□□□□ -1.83
VPS41-206ENST00000418457 YTHDC1Q96MU7 727 aaKnown RBP3.61□□□□□ -1.83
VPS41-206ENST00000418457 SPATA25Q9BR10 227 aa3.61□□□□□ -1.83
VPS41-206ENST00000418457 MYL10Q9BUA6 226 aa3.61□□□□□ -1.83
VPS41-206ENST00000418457 TMEM168Q9H0V1 697 aa3.61□□□□□ -1.83
VPS41-206ENST00000418457 KCNG1Q9UIX4 513 aa3.61□□□□□ -1.83
VPS41-206ENST00000418457 WRNQ14191 1432 aaPredicted RBP eCLIP3.61□□□□□ -1.83
VPS41-206ENST00000418457 SCRIBQ14160 1630 aa3.6□□□□□ -1.83
VPS41-206ENST00000418457 ST20-MTHFSA0A0A6YYL1 179 aa3.6□□□□□ -1.83
VPS41-206ENST00000418457 A0A0G2JNJ9 132 aa3.6□□□□□ -1.83
VPS41-206ENST00000418457 C9orf118A6NHY6 69 aa3.6□□□□□ -1.83
VPS41-206ENST00000418457 ELL2O00472 640 aaPredicted RBP3.6□□□□□ -1.83
VPS41-206ENST00000418457 MAFGO15525 162 aa3.6□□□□□ -1.83
VPS41-206ENST00000418457 CUTAO60888 179 aa3.6□□□□□ -1.83
VPS41-206ENST00000418457 MAFO75444 373 aaPredicted RBP3.6□□□□□ -1.83
VPS41-206ENST00000418457 KLHL18O94889 574 aa3.6□□□□□ -1.83
VPS41-206ENST00000418457 POLD1P28340 1107 aa3.6□□□□□ -1.83
VPS41-206ENST00000418457 KCNC1P48547 511 aa3.6□□□□□ -1.83
VPS41-206ENST00000418457 SLURP1P55000 103 aa3.6□□□□□ -1.83
VPS41-206ENST00000418457 MAP3K12Q12852 859 aa3.6□□□□□ -1.83
VPS41-206ENST00000418457 MOGSQ13724 837 aa3.6□□□□□ -1.83
VPS41-206ENST00000418457 NOLC1Q14978 699 aaKnown RBP eCLIP3.6□□□□□ -1.83
VPS41-206ENST00000418457 RGL3Q3MIN7 710 aa3.6□□□□□ -1.83
VPS41-206ENST00000418457 TMEM200BQ69YZ2 307 aa3.6□□□□□ -1.83
VPS41-206ENST00000418457 KIAA1841Q6NSI8 718 aa3.6□□□□□ -1.83
VPS41-206ENST00000418457 OTOP2Q7RTS6 562 aa3.6□□□□□ -1.83
VPS41-206ENST00000418457 KANSL1Q7Z3B3 1105 aa3.6□□□□□ -1.83
VPS41-206ENST00000418457 CXorf67Q86X51 503 aaPredicted RBP3.6□□□□□ -1.83
VPS41-206ENST00000418457 IFNL2Q8IZJ0 200 aa3.6□□□□□ -1.83
VPS41-206ENST00000418457 NUDT10Q8NFP7 164 aa3.6□□□□□ -1.83
VPS41-206ENST00000418457 NUDT11Q96G61 164 aa3.6□□□□□ -1.83
VPS41-206ENST00000418457 AHCYL2Q96HN2 611 aaKnown RBP3.6□□□□□ -1.83
VPS41-206ENST00000418457 PUS7LQ9H0K6 701 aaKnown RBP3.6□□□□□ -1.83
VPS41-206ENST00000418457 SEMA4AQ9H3S1 761 aa3.6□□□□□ -1.83
VPS41-206ENST00000418457 BARX1Q9HBU1 254 aaPredicted RBP3.6□□□□□ -1.83
VPS41-206ENST00000418457 VTA1Q9NP79 307 aa3.6□□□□□ -1.83
VPS41-206ENST00000418457 TOPORSQ9NS56 1045 aaPredicted RBP3.6□□□□□ -1.83
VPS41-206ENST00000418457 HOMER2Q9NSB8 354 aa3.6□□□□□ -1.83
VPS41-206ENST00000418457 Q9UFV3 132 aa3.6□□□□□ -1.83
VPS41-206ENST00000418457 TTBK1Q5TCY1 1321 aaPredicted RBP3.6□□□□□ -1.83
VPS41-206ENST00000418457 ADAMTS20P59510 1910 aa3.6□□□□□ -1.83
VPS41-206ENST00000418457 BAZ1AQ9NRL2 1556 aaPredicted RBP3.59□□□□□ -1.83
VPS41-206ENST00000418457 GOLGA8AA7E2F4 631 aa3.59□□□□□ -1.83
VPS41-206ENST00000418457 GOLGA8BA8MQT2 603 aa3.59□□□□□ -1.83
VPS41-206ENST00000418457 HMGCRP04035 888 aa3.59□□□□□ -1.83
VPS41-206ENST00000418457 ZSCAN22P10073 491 aaPredicted RBP3.59□□□□□ -1.83
VPS41-206ENST00000418457 ETV4P43268 484 aa3.59□□□□□ -1.83
VPS41-206ENST00000418457 KCNQ1P51787 676 aa3.59□□□□□ -1.83
VPS41-206ENST00000418457 MANFP55145 182 aaKnown RBP3.59□□□□□ -1.83
VPS41-206ENST00000418457 ITKQ08881 620 aa3.59□□□□□ -1.83
VPS41-206ENST00000418457 TOP3AQ13472 1001 aaPredicted RBP3.59□□□□□ -1.83
VPS41-206ENST00000418457 PDCD1Q15116 288 aa3.59□□□□□ -1.83
VPS41-206ENST00000418457 DGKDQ16760 1214 aa3.59□□□□□ -1.83
VPS41-206ENST00000418457 ZBTB41Q5SVQ8 909 aa3.59□□□□□ -1.83
VPS41-206ENST00000418457 UNQ6494/PRO21346Q6UXR6 183 aa3.59□□□□□ -1.83
VPS41-206ENST00000418457 Q6ZUG5 572 aa3.59□□□□□ -1.83
VPS41-206ENST00000418457 FAM124AQ86V42 546 aa3.59□□□□□ -1.83
VPS41-206ENST00000418457 ZNF761Q86XN6 746 aaPredicted RBP3.59□□□□□ -1.83
VPS41-206ENST00000418457 REXO1L1PQ8IX06 675 aa3.59□□□□□ -1.83
VPS41-206ENST00000418457 SP8Q8IXZ3 490 aa3.59□□□□□ -1.83
VPS41-206ENST00000418457 RPUSD2Q8IZ73 545 aaKnown RBP3.59□□□□□ -1.83
VPS41-206ENST00000418457 KLHL36Q8N4N3 616 aa3.59□□□□□ -1.83
VPS41-206ENST00000418457 CNTD1Q8N815 330 aa3.59□□□□□ -1.83
VPS41-206ENST00000418457 OR5AN1Q8NGI8 311 aa3.59□□□□□ -1.83
VPS41-206ENST00000418457 MTMR8Q96EF0 704 aa3.59□□□□□ -1.83
VPS41-206ENST00000418457 LCORQ96JN0 433 aaPredicted RBP3.59□□□□□ -1.83
VPS41-206ENST00000418457 ACAP3Q96P50 834 aa3.59□□□□□ -1.83
VPS41-206ENST00000418457 ANO3Q9BYT9 981 aa3.59□□□□□ -1.83
VPS41-206ENST00000418457 PITHD1Q9GZP4 211 aaPredicted RBP3.59□□□□□ -1.83
VPS41-206ENST00000418457 WNT8AQ9H1J5 351 aa3.59□□□□□ -1.83
VPS41-206ENST00000418457 MTG2Q9H4K7 406 aa3.59□□□□□ -1.83
VPS41-206ENST00000418457 GOLGA2P5Q9HBQ8 144 aa3.59□□□□□ -1.83
VPS41-206ENST00000418457 LUC7LQ9NQ29 371 aaKnown RBP3.59□□□□□ -1.83
VPS41-206ENST00000418457 C14orf119Q9NWQ9 140 aa3.59□□□□□ -1.83
VPS41-206ENST00000418457 KCMF1Q9P0J7 381 aa3.59□□□□□ -1.83
VPS41-206ENST00000418457 CDC42EP3Q9UKI2 254 aa3.59□□□□□ -1.83
VPS41-206ENST00000418457 PPP2R3BQ9Y5P8 575 aa3.59□□□□□ -1.83
VPS41-206ENST00000418457 WASHC2AQ641Q2 1341 aa3.59□□□□□ -1.83
VPS41-206ENST00000418457 CLSPNQ9HAW4 1339 aa3.59□□□□□ -1.83
VPS41-206ENST00000418457 EIF4G1Q04637 1599 aaKnown RBP3.59□□□□□ -1.84
VPS41-206ENST00000418457 PRSS38A1L453 326 aa3.58□□□□□ -1.84
VPS41-206ENST00000418457 MROH6A6NGR9 719 aa3.58□□□□□ -1.84
VPS41-206ENST00000418457 K7ESF4 209 aa3.58□□□□□ -1.84
VPS41-206ENST00000418457 TRIM13O60858 407 aa3.58□□□□□ -1.84
VPS41-206ENST00000418457 KATNA1O75449 491 aa3.58□□□□□ -1.84
VPS41-206ENST00000418457 SASH1O94885 1247 aa3.58□□□□□ -1.84
VPS41-206ENST00000418457 PCDH8O95206 1070 aa3.58□□□□□ -1.84
VPS41-206ENST00000418457 CLEC2LP0C7M8 214 aa3.58□□□□□ -1.84
VPS41-206ENST00000418457 BMP7P18075 431 aa3.58□□□□□ -1.84
VPS41-206ENST00000418457 SCAND1P57086 179 aa3.58□□□□□ -1.84
VPS41-206ENST00000418457 GJA9P57773 515 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms