RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 PTPROQ16827 1216 aa8.69□□□□□ -1.02
HMGXB4-202ENST00000418170 TRIM74Q86UV6 250 aa8.69□□□□□ -1.02
HMGXB4-202ENST00000418170 TRIM73Q86UV7 250 aa8.69□□□□□ -1.02
HMGXB4-202ENST00000418170 ENDOVQ8N8Q3 282 aaKnown RBP8.69□□□□□ -1.02
HMGXB4-202ENST00000418170 FAM133AQ8N9E0 248 aa8.69□□□□□ -1.02
HMGXB4-202ENST00000418170 PIGOQ8TEQ8 1089 aa8.69□□□□□ -1.02
HMGXB4-202ENST00000418170 ETNK1Q9HBU6 452 aa8.69□□□□□ -1.02
HMGXB4-202ENST00000418170 RPTORQ8N122 1335 aa8.69□□□□□ -1.02
HMGXB4-202ENST00000418170 CCDC194A0A1B0GVG4 234 aa8.69□□□□□ -1.02
HMGXB4-202ENST00000418170 A0A1B0GVG6 124 aa8.69□□□□□ -1.02
HMGXB4-202ENST00000418170 CCDC15Q0P6D6 951 aa8.69□□□□□ -1.02
HMGXB4-202ENST00000418170 OR52E8Q6IFG1 317 aa8.69□□□□□ -1.02
HMGXB4-202ENST00000418170 DAAM2Q86T65 1068 aa8.69□□□□□ -1.02
HMGXB4-202ENST00000418170 RASGRP4Q8TDF6 673 aa8.69□□□□□ -1.02
HMGXB4-202ENST00000418170 ASAP3Q8TDY4 903 aa8.69□□□□□ -1.02
HMGXB4-202ENST00000418170 DYDC1Q8WWB3 177 aa8.69□□□□□ -1.02
HMGXB4-202ENST00000418170 KIFAP3Q92845 792 aa8.69□□□□□ -1.02
HMGXB4-202ENST00000418170 RMDN2Q96LZ7 410 aa8.69□□□□□ -1.02
HMGXB4-202ENST00000418170 TRAPPC9Q96Q05 1148 aa8.69□□□□□ -1.02
HMGXB4-202ENST00000418170 SMIM22K7EJ46 135 aa8.69□□□□□ -1.02
HMGXB4-202ENST00000418170 DR1Q01658 176 aa8.69□□□□□ -1.02
HMGXB4-202ENST00000418170 TSNAXIP1Q2TAA8 658 aa8.69□□□□□ -1.02
HMGXB4-202ENST00000418170 MFSD5Q6N075 450 aa8.69□□□□□ -1.02
HMGXB4-202ENST00000418170 SDCCAG8Q86SQ7 713 aaPredicted RBP8.69□□□□□ -1.02
HMGXB4-202ENST00000418170 PROM2Q8N271 834 aa8.69□□□□□ -1.02
HMGXB4-202ENST00000418170 ANKLE1Q8NAG6 615 aa8.69□□□□□ -1.02
HMGXB4-202ENST00000418170 ZBTB38Q8NAP3 1195 aaPredicted RBP8.69□□□□□ -1.02
HMGXB4-202ENST00000418170 EPS8L3Q8TE67 593 aaKnown RBP8.69□□□□□ -1.02
HMGXB4-202ENST00000418170 VCXQ9H320 206 aa8.69□□□□□ -1.02
HMGXB4-202ENST00000418170 GREM2Q9H772 168 aa8.69□□□□□ -1.02
HMGXB4-202ENST00000418170 SH3GLB2Q9NR46 395 aa8.69□□□□□ -1.02
HMGXB4-202ENST00000418170 ATP8B3O60423 1300 aa8.69□□□□□ -1.02
HMGXB4-202ENST00000418170 PVALEFA0A1B0GWK0 134 aa8.69□□□□□ -1.02
HMGXB4-202ENST00000418170 PDLIM1O00151 329 aa8.69□□□□□ -1.02
HMGXB4-202ENST00000418170 RANBP1P43487 201 aa8.69□□□□□ -1.02
HMGXB4-202ENST00000418170 DRG2P55039 364 aaKnown RBP8.69□□□□□ -1.02
HMGXB4-202ENST00000418170 PTK2Q05397 1052 aa8.69□□□□□ -1.02
HMGXB4-202ENST00000418170 AUHQ13825 339 aaKnown RBP8.69□□□□□ -1.02
HMGXB4-202ENST00000418170 PPP2R5EQ16537 467 aa8.69□□□□□ -1.02
HMGXB4-202ENST00000418170 RNF220Q5VTB9 566 aa8.69□□□□□ -1.02
HMGXB4-202ENST00000418170 RNF43Q68DV7 783 aa8.69□□□□□ -1.02
HMGXB4-202ENST00000418170 ZDHHC24Q6UX98 284 aa8.69□□□□□ -1.02
HMGXB4-202ENST00000418170 UNC13DQ70J99 1090 aa8.69□□□□□ -1.02
HMGXB4-202ENST00000418170 MIGA1Q8NAN2 632 aa8.69□□□□□ -1.02
HMGXB4-202ENST00000418170 SLC17A8Q8NDX2 589 aa8.69□□□□□ -1.02
HMGXB4-202ENST00000418170 FAM136AQ96C01 138 aa8.69□□□□□ -1.02
HMGXB4-202ENST00000418170 DTNBP1Q96EV8 351 aa8.69□□□□□ -1.02
HMGXB4-202ENST00000418170 HES6Q96HZ4 224 aa8.69□□□□□ -1.02
HMGXB4-202ENST00000418170 LRMDAQ9H2I8 198 aa8.69□□□□□ -1.02
HMGXB4-202ENST00000418170 TXLNGQ9NUQ3 528 aa8.69□□□□□ -1.02
HMGXB4-202ENST00000418170 DAAM1Q9Y4D1 1078 aa8.69□□□□□ -1.02
HMGXB4-202ENST00000418170 BAZ2AQ9UIF9 1905 aaKnown RBP8.68□□□□□ -1.02
HMGXB4-202ENST00000418170 UTRNP46939 3433 aa8.68□□□□□ -1.02
HMGXB4-202ENST00000418170 RFC5P40937 340 aa8.68□□□□□ -1.02
HMGXB4-202ENST00000418170 DYNC1I2Q13409 638 aaKnown RBP8.68□□□□□ -1.02
HMGXB4-202ENST00000418170 PUM3Q15397 648 aaKnown RBP8.68□□□□□ -1.02
HMGXB4-202ENST00000418170 ENOX2Q16206 610 aaKnown RBP8.68□□□□□ -1.02
HMGXB4-202ENST00000418170 CCDC152Q4G0S7 254 aa8.68□□□□□ -1.02
HMGXB4-202ENST00000418170 NT5DC3Q86UY8 548 aa8.68□□□□□ -1.02
HMGXB4-202ENST00000418170 DNAJC9Q8WXX5 260 aa8.68□□□□□ -1.02
HMGXB4-202ENST00000418170 PCMTD2Q9NV79 361 aa8.68□□□□□ -1.02
HMGXB4-202ENST00000418170 DLGAP2Q9P1A6 1054 aa8.68□□□□□ -1.02
HMGXB4-202ENST00000418170 SLAIN2Q9P270 581 aa8.68□□□□□ -1.02
HMGXB4-202ENST00000418170 NAGPAQ9UK23 515 aa8.68□□□□□ -1.02
HMGXB4-202ENST00000418170 NR2E1Q9Y466 385 aa8.68□□□□□ -1.02
HMGXB4-202ENST00000418170 COL4A3BPQ9Y5P4 624 aa8.68□□□□□ -1.02
HMGXB4-202ENST00000418170 TAF1LQ8IZX4 1826 aa8.68□□□□□ -1.02
HMGXB4-202ENST00000418170 LAMB2P55268 1798 aa8.68□□□□□ -1.02
HMGXB4-202ENST00000418170 THSD7AQ9UPZ6 1657 aa8.68□□□□□ -1.02
HMGXB4-202ENST00000418170 FAM187AA6NFU0 413 aa8.68□□□□□ -1.02
HMGXB4-202ENST00000418170 FGGP02679 453 aa8.68□□□□□ -1.02
HMGXB4-202ENST00000418170 FGFR2P21802 821 aa8.68□□□□□ -1.02
HMGXB4-202ENST00000418170 PLTPP55058 493 aa8.68□□□□□ -1.02
HMGXB4-202ENST00000418170 MGAT5Q09328 741 aa8.68□□□□□ -1.02
HMGXB4-202ENST00000418170 LRRC14Q15048 493 aa8.68□□□□□ -1.02
HMGXB4-202ENST00000418170 INF2Q27J81 1249 aa8.68□□□□□ -1.02
HMGXB4-202ENST00000418170 LRRC23Q53EV4 343 aaPredicted RBP8.68□□□□□ -1.02
HMGXB4-202ENST00000418170 IRGCQ6NXR0 463 aa8.68□□□□□ -1.02
HMGXB4-202ENST00000418170 CADPS2Q86UW7 1296 aa8.68□□□□□ -1.02
HMGXB4-202ENST00000418170 EXOC3L1Q86VI1 746 aa8.68□□□□□ -1.02
HMGXB4-202ENST00000418170 SYCE1Q8N0S2 351 aa8.68□□□□□ -1.02
HMGXB4-202ENST00000418170 FBXO25Q8TCJ0 367 aa8.68□□□□□ -1.02
HMGXB4-202ENST00000418170 SDR42E1Q8WUS8 393 aa8.68□□□□□ -1.02
HMGXB4-202ENST00000418170 TSG101Q99816 390 aa8.68□□□□□ -1.02
HMGXB4-202ENST00000418170 CCDC113Q9H0I3 377 aa8.68□□□□□ -1.02
HMGXB4-202ENST00000418170 SEMA4AQ9H3S1 761 aa8.68□□□□□ -1.02
HMGXB4-202ENST00000418170 RIC8AQ9NPQ8 531 aa8.68□□□□□ -1.02
HMGXB4-202ENST00000418170 RASGRF2O14827 1237 aa8.68□□□□□ -1.02
HMGXB4-202ENST00000418170 COQ9O75208 318 aa8.68□□□□□ -1.02
HMGXB4-202ENST00000418170 GSTA2P09210 222 aa8.68□□□□□ -1.02
HMGXB4-202ENST00000418170 PYGBP11216 843 aa8.68□□□□□ -1.02
HMGXB4-202ENST00000418170 GM2AP17900 193 aa8.68□□□□□ -1.02
HMGXB4-202ENST00000418170 HOXA7P31268 230 aaPredicted RBP8.68□□□□□ -1.02
HMGXB4-202ENST00000418170 PTDSS1P48651 473 aaKnown RBP8.68□□□□□ -1.02
HMGXB4-202ENST00000418170 GNAQP50148 359 aa8.68□□□□□ -1.02
HMGXB4-202ENST00000418170 AGGF1Q8N302 714 aaeCLIP8.68□□□□□ -1.02
HMGXB4-202ENST00000418170 ZCWPW1Q9H0M4 648 aa8.68□□□□□ -1.02
HMGXB4-202ENST00000418170 GANQ9H2C0 597 aa8.68□□□□□ -1.02
HMGXB4-202ENST00000418170 A0A0A6YYK5 440 aaPredicted RBP8.67□□□□□ -1.02
HMGXB4-202ENST00000418170 KIAA0391O15091 583 aaKnown RBP8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms