RNA–Protein interactions for RNA: ENST00000417799.2

NIFKP3-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 3, humanhuman

BASIC

Gene NIFKP3, Length 865 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP3-201ENST00000417799 EBF1Q9UH73 591 aa7.25□□□□□ -1.25
NIFKP3-201ENST00000417799 NARFQ9UHQ1 456 aa7.25□□□□□ -1.25
NIFKP3-201ENST00000417799 PCDHA9Q9Y5H5 950 aa7.25□□□□□ -1.25
NIFKP3-201ENST00000417799 PCDHA2Q9Y5H9 948 aa7.25□□□□□ -1.25
NIFKP3-201ENST00000417799 RGPD3A6NKT7 1758 aaPredicted RBP7.25□□□□□ -1.25
NIFKP3-201ENST00000417799 RGPD4Q7Z3J3 1758 aa7.25□□□□□ -1.25
NIFKP3-201ENST00000417799 TAF1LQ8IZX4 1826 aa7.24□□□□□ -1.25
NIFKP3-201ENST00000417799 A0A087X0B3 334 aa7.24□□□□□ -1.25
NIFKP3-201ENST00000417799 C7orf72A4D263 438 aa7.24□□□□□ -1.25
NIFKP3-201ENST00000417799 MYO1BO43795 1136 aa7.24□□□□□ -1.25
NIFKP3-201ENST00000417799 NPHS1O60500 1241 aa7.24□□□□□ -1.25
NIFKP3-201ENST00000417799 RASGRP1O95267 797 aa7.24□□□□□ -1.25
NIFKP3-201ENST00000417799 ASLP04424 464 aa7.24□□□□□ -1.25
NIFKP3-201ENST00000417799 FUT4P22083 530 aa7.24□□□□□ -1.25
NIFKP3-201ENST00000417799 KIR2DL1P43626 348 aaPredicted RBP7.24□□□□□ -1.25
NIFKP3-201ENST00000417799 KIR2DL2P43627 348 aaPredicted RBP7.24□□□□□ -1.25
NIFKP3-201ENST00000417799 GCKRQ14397 625 aa7.24□□□□□ -1.25
NIFKP3-201ENST00000417799 SLC15A2Q16348 729 aa7.24□□□□□ -1.25
NIFKP3-201ENST00000417799 LCE3BQ5TA77 95 aa7.24□□□□□ -1.25
NIFKP3-201ENST00000417799 CNNM4Q6P4Q7 775 aa7.24□□□□□ -1.25
NIFKP3-201ENST00000417799 LBX2Q6XYB7 198 aa7.24□□□□□ -1.25
NIFKP3-201ENST00000417799 NFXL1Q6ZNB6 911 aa7.24□□□□□ -1.25
NIFKP3-201ENST00000417799 LRRTM3Q86VH5 581 aa7.24□□□□□ -1.25
NIFKP3-201ENST00000417799 ZNF34Q8IZ26 560 aa7.24□□□□□ -1.25
NIFKP3-201ENST00000417799 CCDC191Q8NCU4 936 aa7.24□□□□□ -1.25
NIFKP3-201ENST00000417799 FLAD1Q8NFF5 587 aa7.24□□□□□ -1.25
NIFKP3-201ENST00000417799 CCDC120Q96HB5 630 aa7.24□□□□□ -1.25
NIFKP3-201ENST00000417799 ISCA1Q9BUE6 129 aa7.24□□□□□ -1.25
NIFKP3-201ENST00000417799 USP44Q9H0E7 712 aa7.24□□□□□ -1.25
NIFKP3-201ENST00000417799 ZBTB40Q9NUA8 1239 aa7.24□□□□□ -1.25
NIFKP3-201ENST00000417799 STK32BQ9NY57 414 aa7.24□□□□□ -1.25
NIFKP3-201ENST00000417799 SRP68Q9UHB9 627 aaKnown RBP7.24□□□□□ -1.25
NIFKP3-201ENST00000417799 ZNF652Q9Y2D9 606 aa7.24□□□□□ -1.25
NIFKP3-201ENST00000417799 PCDHA8Q9Y5H6 950 aa7.24□□□□□ -1.25
NIFKP3-201ENST00000417799 TNPO3Q9Y5L0 923 aaKnown RBP7.24□□□□□ -1.25
NIFKP3-201ENST00000417799 TIMM13Q9Y5L4 95 aaPredicted RBP7.24□□□□□ -1.25
NIFKP3-201ENST00000417799 IBTKQ9P2D0 1353 aaPredicted RBP7.23□□□□□ -1.25
NIFKP3-201ENST00000417799 A0A1W2PQ45 241 aaPredicted RBP7.23□□□□□ -1.25
NIFKP3-201ENST00000417799 A0A1W2PQY0 241 aa7.23□□□□□ -1.25
NIFKP3-201ENST00000417799 TCRBV16S1A1N1A0A5B0 115 aa7.23□□□□□ -1.25
NIFKP3-201ENST00000417799 OPA1O60313 960 aa7.23□□□□□ -1.25
NIFKP3-201ENST00000417799 USP2O75604 605 aaPredicted RBP7.23□□□□□ -1.25
NIFKP3-201ENST00000417799 WNT11O96014 354 aa7.23□□□□□ -1.25
NIFKP3-201ENST00000417799 GNAI3P08754 354 aa7.23□□□□□ -1.25
NIFKP3-201ENST00000417799 IGFALSP35858 605 aa7.23□□□□□ -1.25
NIFKP3-201ENST00000417799 HK2P52789 917 aa7.23□□□□□ -1.25
NIFKP3-201ENST00000417799 SLC23A3Q6PIS1 610 aa7.23□□□□□ -1.25
NIFKP3-201ENST00000417799 SLCO6A1Q86UG4 719 aa7.23□□□□□ -1.25
NIFKP3-201ENST00000417799 THNSL2Q86YJ6 484 aa7.23□□□□□ -1.25
NIFKP3-201ENST00000417799 ANKS4BQ8N8V4 417 aa7.23□□□□□ -1.25
NIFKP3-201ENST00000417799 PI4K2BQ8TCG2 481 aa7.23□□□□□ -1.25
NIFKP3-201ENST00000417799 GPATCH3Q96I76 525 aa7.23□□□□□ -1.25
NIFKP3-201ENST00000417799 CHAMP1Q96JM3 812 aa7.23□□□□□ -1.25
NIFKP3-201ENST00000417799 JMJD8Q96S16 334 aa7.23□□□□□ -1.25
NIFKP3-201ENST00000417799 MEIS3Q99687 375 aa7.23□□□□□ -1.25
NIFKP3-201ENST00000417799 KRTAP4-12Q9BQ66 201 aa7.23□□□□□ -1.25
NIFKP3-201ENST00000417799 ALG1Q9BT22 464 aa7.23□□□□□ -1.25
NIFKP3-201ENST00000417799 PCMTD2Q9NV79 361 aa7.23□□□□□ -1.25
NIFKP3-201ENST00000417799 CWC25Q9NXE8 425 aaPredicted RBP7.23□□□□□ -1.25
NIFKP3-201ENST00000417799 C9orf78Q9NZ63 289 aaPredicted RBP7.23□□□□□ -1.25
NIFKP3-201ENST00000417799 USP42Q9H9J4 1324 aaKnown RBP7.23□□□□□ -1.25
NIFKP3-201ENST00000417799 EP400Q96L91 3159 aa7.22□□□□□ -1.25
NIFKP3-201ENST00000417799 PDE8AO60658 829 aa7.22□□□□□ -1.25
NIFKP3-201ENST00000417799 VIL1P09327 827 aaKnown RBP7.22□□□□□ -1.25
NIFKP3-201ENST00000417799 NBPF7P0C2Y1 421 aaPredicted RBP7.22□□□□□ -1.25
NIFKP3-201ENST00000417799 UBTFL1P0CB47 393 aaPredicted RBP7.22□□□□□ -1.25
NIFKP3-201ENST00000417799 IBSPP21815 317 aaPredicted RBP7.22□□□□□ -1.25
NIFKP3-201ENST00000417799 GPTP24298 496 aa7.22□□□□□ -1.25
NIFKP3-201ENST00000417799 GTF2A2P52657 109 aa7.22□□□□□ -1.25
NIFKP3-201ENST00000417799 RTP1P59025 263 aa7.22□□□□□ -1.25
NIFKP3-201ENST00000417799 RPL11P62913 178 aaKnown RBP7.22□□□□□ -1.25
NIFKP3-201ENST00000417799 CHRNEQ04844 493 aa7.22□□□□□ -1.25
NIFKP3-201ENST00000417799 LSAMPQ13449 338 aa7.22□□□□□ -1.25
NIFKP3-201ENST00000417799 SLC14A2Q15849 920 aa7.22□□□□□ -1.25
NIFKP3-201ENST00000417799 KIZQ2M2Z5 673 aa7.22□□□□□ -1.25
NIFKP3-201ENST00000417799 PARP10Q53GL7 1025 aa7.22□□□□□ -1.25
NIFKP3-201ENST00000417799 CEP128Q6ZU80 1094 aa7.22□□□□□ -1.25
NIFKP3-201ENST00000417799 KRT26Q7Z3Y9 468 aa7.22□□□□□ -1.25
NIFKP3-201ENST00000417799 NLRP10Q86W26 655 aa7.22□□□□□ -1.25
NIFKP3-201ENST00000417799 COL23A1Q86Y22 540 aaPredicted RBP7.22□□□□□ -1.25
NIFKP3-201ENST00000417799 SPPL2CQ8IUH8 684 aa7.22□□□□□ -1.25
NIFKP3-201ENST00000417799 TP53INP2Q8IXH6 220 aa7.22□□□□□ -1.25
NIFKP3-201ENST00000417799 DDX1Q92499 740 aaKnown RBP7.22□□□□□ -1.25
NIFKP3-201ENST00000417799 TARS2Q9BW92 718 aaKnown RBP7.22□□□□□ -1.25
NIFKP3-201ENST00000417799 HDAC5Q9UQL6 1122 aa7.22□□□□□ -1.25
NIFKP3-201ENST00000417799 NIP7Q9Y221 180 aaKnown RBP eCLIP7.22□□□□□ -1.25
NIFKP3-201ENST00000417799 COL4A3BPQ9Y5P4 624 aa7.22□□□□□ -1.25
NIFKP3-201ENST00000417799 UTYO14607 1347 aa7.22□□□□□ -1.25
NIFKP3-201ENST00000417799 PNPLA7Q6ZV29 1317 aa7.22□□□□□ -1.25
NIFKP3-201ENST00000417799 NUP188Q5SRE5 1749 aa7.21□□□□□ -1.25
NIFKP3-201ENST00000417799 GSG1L2A8MUP6 293 aa7.21□□□□□ -1.26
NIFKP3-201ENST00000417799 B4E1Z4 1266 aa7.21□□□□□ -1.26
NIFKP3-201ENST00000417799 ARVCFO00192 962 aa7.21□□□□□ -1.26
NIFKP3-201ENST00000417799 GRM8O00222 908 aa7.21□□□□□ -1.26
NIFKP3-201ENST00000417799 GNAI2P04899 355 aa7.21□□□□□ -1.26
NIFKP3-201ENST00000417799 GYS1P13807 737 aa7.21□□□□□ -1.26
NIFKP3-201ENST00000417799 FLT3P36888 993 aa7.21□□□□□ -1.26
NIFKP3-201ENST00000417799 BCL6P41182 706 aa7.21□□□□□ -1.26
NIFKP3-201ENST00000417799 PAK1Q13153 545 aa7.21□□□□□ -1.26
NIFKP3-201ENST00000417799 ZNF460Q14592 562 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms