RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 AAASQ9NRG9 546 aa16.34■□□□□ 0.21
PAF1-202ENST00000416728 CD207Q9UJ71 328 aa16.34■□□□□ 0.21
PAF1-202ENST00000416728 PCDHB12Q9Y5F1 795 aa16.34■□□□□ 0.21
PAF1-202ENST00000416728 C19orf67A6NJJ6 358 aa16.33■□□□□ 0.2
PAF1-202ENST00000416728 TBKBP1A7MCY6 615 aa16.33■□□□□ 0.2
PAF1-202ENST00000416728 WDR64B1ANS9 1081 aa16.33■□□□□ 0.2
PAF1-202ENST00000416728 C9IYK1 514 aa16.33■□□□□ 0.2
PAF1-202ENST00000416728 MAGEB2O15479 319 aa16.33■□□□□ 0.2
PAF1-202ENST00000416728 REC8O95072 547 aa16.33■□□□□ 0.2
PAF1-202ENST00000416728 IFNAR1P17181 557 aa16.33■□□□□ 0.2
PAF1-202ENST00000416728 CSPP1Q1MSJ5 1256 aa16.33■□□□□ 0.2
PAF1-202ENST00000416728 ADGRD2Q7Z7M1 963 aa16.33■□□□□ 0.2
PAF1-202ENST00000416728 FAM228AQ86W67 206 aa16.33■□□□□ 0.2
PAF1-202ENST00000416728 LENG9Q96B70 501 aa16.33■□□□□ 0.2
PAF1-202ENST00000416728 MAP7D2Q96T17 732 aa16.33■□□□□ 0.2
PAF1-202ENST00000416728 UPF3BQ9BZI7 483 aaKnown RBP16.33■□□□□ 0.2
PAF1-202ENST00000416728 VPS54Q9P1Q0 977 aa16.33■□□□□ 0.2
PAF1-202ENST00000416728 GPR32O75388 356 aa16.32■□□□□ 0.2
PAF1-202ENST00000416728 PDIA3P30101 505 aaKnown RBP16.32■□□□□ 0.2
PAF1-202ENST00000416728 CLCN3P51790 818 aa16.32■□□□□ 0.2
PAF1-202ENST00000416728 CCT2P78371 535 aaKnown RBP16.32■□□□□ 0.2
PAF1-202ENST00000416728 FAM102BQ5T8I3 360 aa16.32■□□□□ 0.2
PAF1-202ENST00000416728 EFHBQ8N7U6 833 aa16.32■□□□□ 0.2
PAF1-202ENST00000416728 CCDC136Q96JN2 1154 aa16.32■□□□□ 0.2
PAF1-202ENST00000416728 ATP6V0A4Q9HBG4 840 aa16.32■□□□□ 0.2
PAF1-202ENST00000416728 TMEM161AQ9NX61 479 aa16.32■□□□□ 0.2
PAF1-202ENST00000416728 AKT3Q9Y243 479 aa16.32■□□□□ 0.2
PAF1-202ENST00000416728 GAS7O60861 476 aa16.31■□□□□ 0.2
PAF1-202ENST00000416728 OATP04181 439 aa16.31■□□□□ 0.2
PAF1-202ENST00000416728 TMOD1P28289 359 aa16.31■□□□□ 0.2
PAF1-202ENST00000416728 NRIP1P48552 1158 aa16.31■□□□□ 0.2
PAF1-202ENST00000416728 NLRP5P59047 1200 aa16.31■□□□□ 0.2
PAF1-202ENST00000416728 UBE3AQ05086 875 aa16.31■□□□□ 0.2
PAF1-202ENST00000416728 EFCAB12Q6NXP0 572 aa16.31■□□□□ 0.2
PAF1-202ENST00000416728 RBM23Q86U06 439 aaKnown RBP16.31■□□□□ 0.2
PAF1-202ENST00000416728 THNSL1Q8IYQ7 743 aa16.31■□□□□ 0.2
PAF1-202ENST00000416728 MICAL1Q8TDZ2 1067 aa16.31■□□□□ 0.2
PAF1-202ENST00000416728 MSLNLQ96KJ4 702 aa16.31■□□□□ 0.2
PAF1-202ENST00000416728 RIT2Q99578 217 aa16.31■□□□□ 0.2
PAF1-202ENST00000416728 ELAC1Q9H777 363 aaKnown RBP16.31■□□□□ 0.2
PAF1-202ENST00000416728 NCOA5Q9HCD5 579 aaKnown RBP16.31■□□□□ 0.2
PAF1-202ENST00000416728 SH3GLB2Q9NR46 395 aa16.31■□□□□ 0.2
PAF1-202ENST00000416728 DISC1Q9NRI5 854 aa16.31■□□□□ 0.2
PAF1-202ENST00000416728 NRBP2Q9NSY0 501 aa16.31■□□□□ 0.2
PAF1-202ENST00000416728 MSH4O15457 936 aa16.3■□□□□ 0.2
PAF1-202ENST00000416728 CHMP2AO43633 222 aa16.3■□□□□ 0.2
PAF1-202ENST00000416728 ZNF862O60290 1169 aa16.3■□□□□ 0.2
PAF1-202ENST00000416728 FGF18O76093 207 aa16.3■□□□□ 0.2
PAF1-202ENST00000416728 FGFR1P11362 822 aa16.3■□□□□ 0.2
PAF1-202ENST00000416728 USP11P51784 963 aa16.3■□□□□ 0.2
PAF1-202ENST00000416728 EVCP57679 992 aa16.3■□□□□ 0.2
PAF1-202ENST00000416728 NLRP11P59045 1033 aaKnown RBP16.3■□□□□ 0.2
PAF1-202ENST00000416728 FAM189BP81408 668 aa16.3■□□□□ 0.2
PAF1-202ENST00000416728 PRKCEQ02156 737 aa16.3■□□□□ 0.2
PAF1-202ENST00000416728 TRIM22Q8IYM9 498 aa16.3■□□□□ 0.2
PAF1-202ENST00000416728 ZNF710Q8N1W2 664 aa16.3■□□□□ 0.2
PAF1-202ENST00000416728 LRRC71Q8N4P6 559 aa16.3■□□□□ 0.2
PAF1-202ENST00000416728 TLE6Q9H808 572 aa16.3■□□□□ 0.2
PAF1-202ENST00000416728 TLR9Q9NR96 1032 aa16.3■□□□□ 0.2
PAF1-202ENST00000416728 TYW1Q9NV66 732 aaKnown RBP16.3■□□□□ 0.2
PAF1-202ENST00000416728 HOXA2O43364 376 aa16.29■□□□□ 0.2
PAF1-202ENST00000416728 EYA4O95677 639 aa16.29■□□□□ 0.2
PAF1-202ENST00000416728 ZSCAN20P17040 1043 aaPredicted RBP16.29■□□□□ 0.2
PAF1-202ENST00000416728 LAG3P18627 525 aa16.29■□□□□ 0.2
PAF1-202ENST00000416728 SFNP31947 248 aa16.29■□□□□ 0.2
PAF1-202ENST00000416728 JAK3P52333 1124 aa16.29■□□□□ 0.2
PAF1-202ENST00000416728 DSC3Q14574 896 aa16.29■□□□□ 0.2
PAF1-202ENST00000416728 LRCH2Q5VUJ6 765 aa16.29■□□□□ 0.2
PAF1-202ENST00000416728 LINC01465Q8N7H1 131 aa16.29■□□□□ 0.2
PAF1-202ENST00000416728 COLGALT1Q8NBJ5 622 aa16.29■□□□□ 0.2
PAF1-202ENST00000416728 SMRP1Q8NCR6 262 aa16.29■□□□□ 0.2
PAF1-202ENST00000416728 SCLT1Q96NL6 688 aa16.29■□□□□ 0.2
PAF1-202ENST00000416728 TEKT3Q9BXF9 490 aa16.29■□□□□ 0.2
PAF1-202ENST00000416728 C22orf23Q9BZE7 217 aa16.29■□□□□ 0.2
PAF1-202ENST00000416728 CLEC1BQ9P126 229 aa16.29■□□□□ 0.2
PAF1-202ENST00000416728 HCSTQ9UBK5 93 aa16.29■□□□□ 0.2
PAF1-202ENST00000416728 PCDHGC5Q9Y5F6 944 aa16.29■□□□□ 0.2
PAF1-202ENST00000416728 EDIL3O43854 480 aa16.28■□□□□ 0.2
PAF1-202ENST00000416728 EIF4BP23588 611 aaKnown RBP16.28■□□□□ 0.2
PAF1-202ENST00000416728 SSRP1Q08945 709 aaKnown RBP16.28■□□□□ 0.2
PAF1-202ENST00000416728 COASYQ13057 564 aa16.28■□□□□ 0.2
PAF1-202ENST00000416728 RUFY3Q7L099 469 aa16.28■□□□□ 0.2
PAF1-202ENST00000416728 ABI1Q8IZP0 508 aa16.28■□□□□ 0.2
PAF1-202ENST00000416728 TBCKQ8TEA7 893 aa16.28■□□□□ 0.2
PAF1-202ENST00000416728 SLC5A5Q92911 643 aa16.28■□□□□ 0.2
PAF1-202ENST00000416728 TMEM117Q9H0C3 514 aa16.28■□□□□ 0.2
PAF1-202ENST00000416728 ADAMTS10Q9H324 1103 aa16.28■□□□□ 0.2
PAF1-202ENST00000416728 UNC45AQ9H3U1 944 aa16.28■□□□□ 0.2
PAF1-202ENST00000416728 BARX2Q9UMQ3 279 aaPredicted RBP16.28■□□□□ 0.2
PAF1-202ENST00000416728 PCDHA4Q9UN74 947 aa16.28■□□□□ 0.2
PAF1-202ENST00000416728 ATG2AQ2TAZ0 1938 aa16.28■□□□□ 0.2
PAF1-202ENST00000416728 FSD2A1L4K1 749 aa16.27■□□□□ 0.2
PAF1-202ENST00000416728 CPLX1O14810 134 aa16.27■□□□□ 0.2
PAF1-202ENST00000416728 GLP2RO95838 553 aa16.27■□□□□ 0.2
PAF1-202ENST00000416728 TBC1D8BQ0IIM8 1120 aa16.27■□□□□ 0.2
PAF1-202ENST00000416728 TOB2Q14106 344 aaPredicted RBP16.27■□□□□ 0.2
PAF1-202ENST00000416728 UGCGQ16739 394 aa16.27■□□□□ 0.2
PAF1-202ENST00000416728 PDE12Q6L8Q7 609 aaKnown RBP16.27■□□□□ 0.2
PAF1-202ENST00000416728 RDM1Q8NG50 284 aa16.27■□□□□ 0.2
PAF1-202ENST00000416728 GJA10Q969M2 543 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms