RNA–Protein interactions for RNA: ENST00000416123.6

COL12A1-203, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 8,964 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-203ENST00000416123 NME3Q13232 169 aa11.43□□□□□ -0.58
COL12A1-203ENST00000416123 ARL6IP4Q66PJ3 421 aaKnown RBP11.43□□□□□ -0.58
COL12A1-203ENST00000416123 EIF3CQ99613 913 aaKnown RBP11.43□□□□□ -0.58
COL12A1-203ENST00000416123 ANAPC7Q9UJX3 599 aa11.43□□□□□ -0.58
COL12A1-203ENST00000416123 GOLGA8CPA6NN73 597 aa11.42□□□□□ -0.58
COL12A1-203ENST00000416123 PGRMC1O00264 195 aaKnown RBP11.42□□□□□ -0.58
COL12A1-203ENST00000416123 TOM1L1O75674 476 aa11.42□□□□□ -0.58
COL12A1-203ENST00000416123 CHGBP05060 677 aa11.42□□□□□ -0.58
COL12A1-203ENST00000416123 KRT3P12035 628 aa11.42□□□□□ -0.58
COL12A1-203ENST00000416123 EIF2AK1Q9BQI3 630 aaKnown RBP11.42□□□□□ -0.58
COL12A1-203ENST00000416123 ARHGEF40Q8TER5 1519 aa11.42□□□□□ -0.58
COL12A1-203ENST00000416123 IPO5O00410 1097 aaKnown RBP11.42□□□□□ -0.58
COL12A1-203ENST00000416123 IRX4P78413 519 aa11.42□□□□□ -0.58
COL12A1-203ENST00000416123 LMNTD2Q8IXW0 634 aa11.42□□□□□ -0.58
COL12A1-203ENST00000416123 ISCA1Q9BUE6 129 aa11.42□□□□□ -0.58
COL12A1-203ENST00000416123 CASQ2O14958 399 aaPredicted RBP11.42□□□□□ -0.58
COL12A1-203ENST00000416123 PLS3P13797 630 aa11.42□□□□□ -0.58
COL12A1-203ENST00000416123 ADRA2BP18089 450 aa11.42□□□□□ -0.58
COL12A1-203ENST00000416123 GFPT1Q06210 699 aaPredicted RBP11.42□□□□□ -0.58
COL12A1-203ENST00000416123 ARL13BQ3SXY8 428 aa11.42□□□□□ -0.58
COL12A1-203ENST00000416123 FAM71BQ8TC56 605 aa11.42□□□□□ -0.58
COL12A1-203ENST00000416123 URGCPQ8TCY9 931 aa11.42□□□□□ -0.58
COL12A1-203ENST00000416123 FAM81BQ96LP2 452 aa11.42□□□□□ -0.58
COL12A1-203ENST00000416123 RUNDC3BQ96NL0 473 aa11.42□□□□□ -0.58
COL12A1-203ENST00000416123 DNAJC12Q9UKB3 198 aa11.42□□□□□ -0.58
COL12A1-203ENST00000416123 A6NNZ2 444 aa11.42□□□□□ -0.58
COL12A1-203ENST00000416123 ARHGAP25P42331 645 aa11.42□□□□□ -0.58
COL12A1-203ENST00000416123 TUBB8Q3ZCM7 444 aa11.42□□□□□ -0.58
COL12A1-203ENST00000416123 IFT122Q9HBG6 1241 aa11.42□□□□□ -0.58
COL12A1-203ENST00000416123 BARHL2Q9NY43 387 aa11.42□□□□□ -0.58
COL12A1-203ENST00000416123 HACD3Q9P035 362 aa11.42□□□□□ -0.58
COL12A1-203ENST00000416123 CDC23Q9UJX2 597 aa11.42□□□□□ -0.58
COL12A1-203ENST00000416123 NR3C1P04150 777 aa11.42□□□□□ -0.58
COL12A1-203ENST00000416123 GUCY1A2P33402 732 aa11.42□□□□□ -0.58
COL12A1-203ENST00000416123 GRM4Q14833 912 aa11.42□□□□□ -0.58
COL12A1-203ENST00000416123 UNC13DQ70J99 1090 aa11.42□□□□□ -0.58
COL12A1-203ENST00000416123 MARCH10Q8NA82 808 aaPredicted RBP11.42□□□□□ -0.58
COL12A1-203ENST00000416123 HEMGNQ9BXL5 484 aa11.42□□□□□ -0.58
COL12A1-203ENST00000416123 ARID5BQ14865 1188 aa11.42□□□□□ -0.58
COL12A1-203ENST00000416123 G3BP2Q9UN86 482 aaKnown RBP11.42□□□□□ -0.58
COL12A1-203ENST00000416123 CAPN7Q9Y6W3 813 aa11.42□□□□□ -0.58
COL12A1-203ENST00000416123 CDHR2Q9BYE9 1310 aa11.42□□□□□ -0.58
COL12A1-203ENST00000416123 ABCA9Q8IUA7 1624 aa11.42□□□□□ -0.58
COL12A1-203ENST00000416123 RPAP1Q9BWH6 1393 aaPredicted RBP11.42□□□□□ -0.58
COL12A1-203ENST00000416123 TMEM62Q0P6H9 643 aa11.42□□□□□ -0.58
COL12A1-203ENST00000416123 HP1BP3Q5SSJ5 553 aaPredicted RBP11.42□□□□□ -0.58
COL12A1-203ENST00000416123 CACNB2Q08289 660 aaPredicted RBP11.41□□□□□ -0.58
COL12A1-203ENST00000416123 MAP7Q14244 749 aa11.41□□□□□ -0.58
COL12A1-203ENST00000416123 MUM1Q2TAK8 710 aa11.41□□□□□ -0.58
COL12A1-203ENST00000416123 OR6J1Q8NGC5 347 aa11.41□□□□□ -0.58
COL12A1-203ENST00000416123 INTS9Q9NV88 658 aaKnown RBP11.41□□□□□ -0.58
COL12A1-203ENST00000416123 ZBED1O96006 694 aa11.41□□□□□ -0.58
COL12A1-203ENST00000416123 TSNAXIP1Q2TAA8 658 aa11.41□□□□□ -0.58
COL12A1-203ENST00000416123 C1orf228Q6PIY5 440 aa11.41□□□□□ -0.58
COL12A1-203ENST00000416123 SPDYE1Q8NFV5 336 aaPredicted RBP11.41□□□□□ -0.58
COL12A1-203ENST00000416123 RAET1EQ8TD07 263 aa11.41□□□□□ -0.58
COL12A1-203ENST00000416123 SRGAP2O75044 1071 aa11.41□□□□□ -0.58
COL12A1-203ENST00000416123 LDHAP00338 332 aaKnown RBP11.41□□□□□ -0.58
COL12A1-203ENST00000416123 CLTAP09496 248 aa11.41□□□□□ -0.58
COL12A1-203ENST00000416123 ELMOD1Q8N336 334 aa11.41□□□□□ -0.58
COL12A1-203ENST00000416123 CEP120Q8N960 986 aa11.41□□□□□ -0.58
COL12A1-203ENST00000416123 TBC1D16Q8TBP0 767 aa11.41□□□□□ -0.58
COL12A1-203ENST00000416123 FAF2Q96CS3 445 aa11.41□□□□□ -0.58
COL12A1-203ENST00000416123 PALMO75781 387 aa11.41□□□□□ -0.58
COL12A1-203ENST00000416123 ACSL3O95573 720 aa11.41□□□□□ -0.58
COL12A1-203ENST00000416123 CIITAP33076 1130 aa11.41□□□□□ -0.58
COL12A1-203ENST00000416123 HABP4Q5JVS0 413 aaKnown RBP11.41□□□□□ -0.58
COL12A1-203ENST00000416123 MFSD14CQ5VZR4 134 aa11.41□□□□□ -0.58
COL12A1-203ENST00000416123 BCAS4Q8TDM0 211 aa11.41□□□□□ -0.58
COL12A1-203ENST00000416123 ZNF746Q6NUN9 644 aaPredicted RBP11.41□□□□□ -0.58
COL12A1-203ENST00000416123 TOGARAM2Q6ZUX3 1019 aa11.41□□□□□ -0.58
COL12A1-203ENST00000416123 ENOX1Q8TC92 643 aaKnown RBP11.41□□□□□ -0.58
COL12A1-203ENST00000416123 DIP2AQ14689 1571 aa11.41□□□□□ -0.58
COL12A1-203ENST00000416123 HUS1O60921 280 aa11.4□□□□□ -0.58
COL12A1-203ENST00000416123 VSTM4Q8IW00 320 aa11.4□□□□□ -0.58
COL12A1-203ENST00000416123 SLC8A2Q9UPR5 921 aa11.4□□□□□ -0.58
COL12A1-203ENST00000416123 ADORA2BP29275 332 aa11.4□□□□□ -0.58
COL12A1-203ENST00000416123 QARSP47897 775 aaKnown RBP11.4□□□□□ -0.58
COL12A1-203ENST00000416123 VAMP7P51809 220 aa11.4□□□□□ -0.58
COL12A1-203ENST00000416123 NSUN2Q08J23 767 aaKnown RBP eCLIP11.4□□□□□ -0.58
COL12A1-203ENST00000416123 ALCAMQ13740 583 aa11.4□□□□□ -0.58
COL12A1-203ENST00000416123 PPP4R3CPQ6ZMV5 832 aa11.4□□□□□ -0.58
COL12A1-203ENST00000416123 PCGF5Q86SE9 256 aa11.4□□□□□ -0.58
COL12A1-203ENST00000416123 HPS3Q969F9 1004 aa11.4□□□□□ -0.58
COL12A1-203ENST00000416123 NVLO15381 856 aaKnown RBP11.4□□□□□ -0.58
COL12A1-203ENST00000416123 FAM217BQ9NTX9 383 aaPredicted RBP11.4□□□□□ -0.58
COL12A1-203ENST00000416123 ASPHQ12797 758 aa11.4□□□□□ -0.58
COL12A1-203ENST00000416123 KCNH2Q12809 1159 aa11.4□□□□□ -0.58
COL12A1-203ENST00000416123 TTC1Q99614 292 aa11.4□□□□□ -0.58
COL12A1-203ENST00000416123 PLEKHG2Q9H7P9 1386 aa11.4□□□□□ -0.58
COL12A1-203ENST00000416123 FER1L4A9Z1Z3 1794 aa11.4□□□□□ -0.58
COL12A1-203ENST00000416123 ARHGEF37A1IGU5 675 aa11.4□□□□□ -0.58
COL12A1-203ENST00000416123 ZSCAN26Q16670 478 aa11.4□□□□□ -0.58
COL12A1-203ENST00000416123 ANO4Q32M45 955 aa11.4□□□□□ -0.58
COL12A1-203ENST00000416123 SRBD1Q8N5C6 995 aaKnown RBP11.4□□□□□ -0.58
COL12A1-203ENST00000416123 ACAD9Q9H845 621 aa11.4□□□□□ -0.58
COL12A1-203ENST00000416123 CLNS1AP54105 237 aaKnown RBP11.4□□□□□ -0.58
COL12A1-203ENST00000416123 ZBED6P86452 979 aa11.4□□□□□ -0.58
COL12A1-203ENST00000416123 DR1Q01658 176 aa11.4□□□□□ -0.58
COL12A1-203ENST00000416123 SLMAPQ14BN4 828 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms