RNA–Protein interactions for RNA: ENST00000416004.1

CHRNA1-206, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2

Gene CHRNA1, Length 1,879 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-206ENST00000416004 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.28□□□□□ -0.76
CHRNA1-206ENST00000416004 PYM1Q9BRP8 204 aaKnown RBP10.28□□□□□ -0.76
CHRNA1-206ENST00000416004 TUT1Q9H6E5 874 aaKnown RBP10.28□□□□□ -0.76
CHRNA1-206ENST00000416004 AZI2Q9H6S1 392 aa10.28□□□□□ -0.76
CHRNA1-206ENST00000416004 GTF2IRD1Q9UHL9 959 aa10.28□□□□□ -0.76
CHRNA1-206ENST00000416004 MAN1B1Q9UKM7 699 aa10.28□□□□□ -0.76
CHRNA1-206ENST00000416004 POTEB3A0JP26 581 aa10.27□□□□□ -0.76
CHRNA1-206ENST00000416004 C17orf102A2RUQ5 167 aa10.27□□□□□ -0.76
CHRNA1-206ENST00000416004 SOX1O00570 391 aaPredicted RBP10.27□□□□□ -0.76
CHRNA1-206ENST00000416004 DYNC1I1O14576 645 aa10.27□□□□□ -0.76
CHRNA1-206ENST00000416004 CHMP2AO43633 222 aa10.27□□□□□ -0.76
CHRNA1-206ENST00000416004 GAS7O60861 476 aa10.27□□□□□ -0.76
CHRNA1-206ENST00000416004 ATP9AO75110 1047 aa10.27□□□□□ -0.76
CHRNA1-206ENST00000416004 SPATA31C1P0DKV0 1188 aa10.27□□□□□ -0.76
CHRNA1-206ENST00000416004 CCT6AP40227 531 aaKnown RBP10.27□□□□□ -0.76
CHRNA1-206ENST00000416004 PTK7Q13308 1070 aa10.27□□□□□ -0.76
CHRNA1-206ENST00000416004 PPP2R5CQ13362 524 aa10.27□□□□□ -0.76
CHRNA1-206ENST00000416004 NT5DC1Q5TFE4 455 aa10.27□□□□□ -0.76
CHRNA1-206ENST00000416004 FAM109BQ6ICB4 259 aaPredicted RBP10.27□□□□□ -0.76
CHRNA1-206ENST00000416004 POTEBQ6S5H4 581 aa10.27□□□□□ -0.76
CHRNA1-206ENST00000416004 ZNF365Q70YC5 407 aa10.27□□□□□ -0.76
CHRNA1-206ENST00000416004 ANP32BQ92688 251 aaKnown RBP10.27□□□□□ -0.76
CHRNA1-206ENST00000416004 CALML4Q96GE6 196 aa10.27□□□□□ -0.76
CHRNA1-206ENST00000416004 UNC45AQ9H3U1 944 aa10.27□□□□□ -0.76
CHRNA1-206ENST00000416004 KBTBD4Q9NVX7 518 aa10.27□□□□□ -0.76
CHRNA1-206ENST00000416004 MSRAQ9UJ68 235 aa10.27□□□□□ -0.76
CHRNA1-206ENST00000416004 TANC1Q9C0D5 1861 aa10.27□□□□□ -0.76
CHRNA1-206ENST00000416004 TMEM265A0A087WTH1 108 aa10.27□□□□□ -0.77
CHRNA1-206ENST00000416004 DDX39AO00148 427 aaKnown RBP10.27□□□□□ -0.77
CHRNA1-206ENST00000416004 LGALS2P05162 132 aa10.27□□□□□ -0.77
CHRNA1-206ENST00000416004 ACRP10323 421 aa10.27□□□□□ -0.77
CHRNA1-206ENST00000416004 NLRP12P59046 1061 aa10.27□□□□□ -0.77
CHRNA1-206ENST00000416004 RAB30Q15771 203 aa10.27□□□□□ -0.77
CHRNA1-206ENST00000416004 TMEM240Q5SV17 173 aa10.27□□□□□ -0.77
CHRNA1-206ENST00000416004 HYIQ5T013 277 aa10.27□□□□□ -0.77
CHRNA1-206ENST00000416004 POTEGQ6S5H5 508 aa10.27□□□□□ -0.77
CHRNA1-206ENST00000416004 DEFB128Q7Z7B8 93 aa10.27□□□□□ -0.77
CHRNA1-206ENST00000416004 CATSPER3Q86XQ3 398 aa10.27□□□□□ -0.77
CHRNA1-206ENST00000416004 SEPT1Q8WYJ6 367 aa10.27□□□□□ -0.77
CHRNA1-206ENST00000416004 GLG1Q92896 1179 aa10.27□□□□□ -0.77
CHRNA1-206ENST00000416004 SMARCE1Q969G3 411 aa10.27□□□□□ -0.77
CHRNA1-206ENST00000416004 EIF2AK1Q9BQI3 630 aaKnown RBP10.27□□□□□ -0.77
CHRNA1-206ENST00000416004 BCAS3Q9H6U6 928 aa10.27□□□□□ -0.77
CHRNA1-206ENST00000416004 CBX8Q9HC52 389 aa10.27□□□□□ -0.77
CHRNA1-206ENST00000416004 ANO10Q9NW15 660 aa10.27□□□□□ -0.77
CHRNA1-206ENST00000416004 RGL1Q9NZL6 768 aa10.27□□□□□ -0.77
CHRNA1-206ENST00000416004 HDAC6Q9UBN7 1215 aa10.27□□□□□ -0.77
CHRNA1-206ENST00000416004 HOOK1Q9UJC3 728 aaKnown RBP10.27□□□□□ -0.77
CHRNA1-206ENST00000416004 KIAA1024Q9UPX6 916 aa10.27□□□□□ -0.77
CHRNA1-206ENST00000416004 TRIP12Q14669 1992 aaPredicted RBP10.27□□□□□ -0.77
CHRNA1-206ENST00000416004 GTPBP6O43824 516 aaPredicted RBP10.26□□□□□ -0.77
CHRNA1-206ENST00000416004 HOXD8P13378 290 aaPredicted RBP10.26□□□□□ -0.77
CHRNA1-206ENST00000416004 SELPP16109 830 aa10.26□□□□□ -0.77
CHRNA1-206ENST00000416004 SP2Q02086 613 aa10.26□□□□□ -0.77
CHRNA1-206ENST00000416004 CYP4A11Q02928 519 aa10.26□□□□□ -0.77
CHRNA1-206ENST00000416004 MORC3Q14149 939 aa10.26□□□□□ -0.77
CHRNA1-206ENST00000416004 DHX8Q14562 1220 aaKnown RBP10.26□□□□□ -0.77
CHRNA1-206ENST00000416004 MCM6Q14566 821 aa10.26□□□□□ -0.77
CHRNA1-206ENST00000416004 GDF6Q6KF10 455 aaPredicted RBP10.26□□□□□ -0.77
CHRNA1-206ENST00000416004 LUZP1Q86V48 1076 aa10.26□□□□□ -0.77
CHRNA1-206ENST00000416004 HERVK_113Q902F9 699 aa10.26□□□□□ -0.77
CHRNA1-206ENST00000416004 RAD54LQ92698 747 aa10.26□□□□□ -0.77
CHRNA1-206ENST00000416004 KAT2BQ92831 832 aa10.26□□□□□ -0.77
CHRNA1-206ENST00000416004 ATP6V0A1Q93050 837 aa10.26□□□□□ -0.77
CHRNA1-206ENST00000416004 SCLYQ96I15 445 aa10.26□□□□□ -0.77
CHRNA1-206ENST00000416004 CDK5RAP3Q96JB5 506 aa10.26□□□□□ -0.77
CHRNA1-206ENST00000416004 RIT2Q99578 217 aa10.26□□□□□ -0.77
CHRNA1-206ENST00000416004 GPR20Q99678 358 aa10.26□□□□□ -0.77
CHRNA1-206ENST00000416004 TEKT3Q9BXF9 490 aa10.26□□□□□ -0.77
CHRNA1-206ENST00000416004 CUEDC2Q9H467 287 aa10.26□□□□□ -0.77
CHRNA1-206ENST00000416004 SMARCAD1Q9H4L7 1026 aa10.26□□□□□ -0.77
CHRNA1-206ENST00000416004 JPH1Q9HDC5 661 aaPredicted RBP10.26□□□□□ -0.77
CHRNA1-206ENST00000416004 ERAP1Q9NZ08 941 aa10.26□□□□□ -0.77
CHRNA1-206ENST00000416004 SLC9A2Q9UBY0 812 aa10.26□□□□□ -0.77
CHRNA1-206ENST00000416004 TELO2Q9Y4R8 837 aa10.26□□□□□ -0.77
CHRNA1-206ENST00000416004 SLC4A7Q9Y6M7 1214 aa10.26□□□□□ -0.77
CHRNA1-206ENST00000416004 E9PMD0 336 aa10.25□□□□□ -0.77
CHRNA1-206ENST00000416004 HAS3O00219 553 aa10.25□□□□□ -0.77
CHRNA1-206ENST00000416004 RPLP2P05387 115 aaKnown RBP10.25□□□□□ -0.77
CHRNA1-206ENST00000416004 IQCF3P0C7M6 154 aa10.25□□□□□ -0.77
CHRNA1-206ENST00000416004 MSNP26038 577 aaKnown RBP10.25□□□□□ -0.77
CHRNA1-206ENST00000416004 RPA1P27694 616 aa10.25□□□□□ -0.77
CHRNA1-206ENST00000416004 TCF7P36402 384 aaPredicted RBP10.25□□□□□ -0.77
CHRNA1-206ENST00000416004 KCNJ6P48051 423 aa10.25□□□□□ -0.77
CHRNA1-206ENST00000416004 ZNF165P49910 485 aa10.25□□□□□ -0.77
CHRNA1-206ENST00000416004 OTOP2Q7RTS6 562 aa10.25□□□□□ -0.77
CHRNA1-206ENST00000416004 RSPH3Q86UC2 560 aa10.25□□□□□ -0.77
CHRNA1-206ENST00000416004 FAM200AQ8TCP9 573 aa10.25□□□□□ -0.77
CHRNA1-206ENST00000416004 HSD17B14Q9BPX1 270 aa10.25□□□□□ -0.77
CHRNA1-206ENST00000416004 WRAP73Q9P2S5 460 aaPredicted RBP10.25□□□□□ -0.77
CHRNA1-206ENST00000416004 STK17AQ9UEE5 414 aa10.25□□□□□ -0.77
CHRNA1-206ENST00000416004 EMSYQ7Z589 1322 aa10.25□□□□□ -0.77
CHRNA1-206ENST00000416004 KDM3AQ9Y4C1 1321 aa10.25□□□□□ -0.77
CHRNA1-206ENST00000416004 MYMKA6NI61 221 aa10.25□□□□□ -0.77
CHRNA1-206ENST00000416004 ZNF500O60304 480 aaPredicted RBP10.25□□□□□ -0.77
CHRNA1-206ENST00000416004 EFCAB14O75071 495 aa10.25□□□□□ -0.77
CHRNA1-206ENST00000416004 SLITRK3O94933 977 aa10.25□□□□□ -0.77
CHRNA1-206ENST00000416004 SMC2O95347 1197 aa10.25□□□□□ -0.77
CHRNA1-206ENST00000416004 CCNE2O96020 404 aa10.25□□□□□ -0.77
CHRNA1-206ENST00000416004 SMIM10L2AP0DMW4 78 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms