RNA–Protein interactions for RNA: ENST00000415749.1

EPHA4-204, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-204ENST00000415749 DNAJC8O75937 253 aaPredicted RBP7.56□□□□□ -1.2
EPHA4-204ENST00000415749 PAMP19021 973 aa7.56□□□□□ -1.2
EPHA4-204ENST00000415749 PDE6BP35913 854 aa7.56□□□□□ -1.2
EPHA4-204ENST00000415749 ECE1P42892 770 aa7.56□□□□□ -1.2
EPHA4-204ENST00000415749 MTHFSP49914 203 aa7.56□□□□□ -1.2
EPHA4-204ENST00000415749 NEK4P51957 841 aa7.56□□□□□ -1.2
EPHA4-204ENST00000415749 PIN1Q13526 163 aaPredicted RBP7.56□□□□□ -1.2
EPHA4-204ENST00000415749 PCBP1Q15365 356 aaKnown RBP eCLIP7.56□□□□□ -1.2
EPHA4-204ENST00000415749 E4F1Q66K89 784 aaPredicted RBP7.56□□□□□ -1.2
EPHA4-204ENST00000415749 IQCEQ6IPM2 695 aa7.56□□□□□ -1.2
EPHA4-204ENST00000415749 PASD1Q8IV76 773 aa7.56□□□□□ -1.2
EPHA4-204ENST00000415749 SAMD3Q8N6K7 520 aa7.56□□□□□ -1.2
EPHA4-204ENST00000415749 TMEM145Q8NBT3 493 aa7.56□□□□□ -1.2
EPHA4-204ENST00000415749 CAPNS2Q96L46 248 aa7.56□□□□□ -1.2
EPHA4-204ENST00000415749 TESK2Q96S53 571 aa7.56□□□□□ -1.2
EPHA4-204ENST00000415749 YIPF4Q9BSR8 244 aa7.56□□□□□ -1.2
EPHA4-204ENST00000415749 BRIP1Q9BX63 1249 aa7.56□□□□□ -1.2
EPHA4-204ENST00000415749 CDH19Q9H159 772 aa7.56□□□□□ -1.2
EPHA4-204ENST00000415749 TNFRSF10DQ9UBN6 386 aa7.56□□□□□ -1.2
EPHA4-204ENST00000415749 HACL1Q9UJ83 578 aa7.56□□□□□ -1.2
EPHA4-204ENST00000415749 ZNF281Q9Y2X9 895 aa7.56□□□□□ -1.2
EPHA4-204ENST00000415749 VIRMAQ69YN4 1812 aaKnown RBP7.56□□□□□ -1.2
EPHA4-204ENST00000415749 NCAPD2Q15021 1401 aa7.55□□□□□ -1.2
EPHA4-204ENST00000415749 MEFVO15553 781 aaPredicted RBP7.55□□□□□ -1.2
EPHA4-204ENST00000415749 GPR39O43194 453 aa7.55□□□□□ -1.2
EPHA4-204ENST00000415749 DLX3O60479 287 aa7.55□□□□□ -1.2
EPHA4-204ENST00000415749 THBDP07204 575 aa7.55□□□□□ -1.2
EPHA4-204ENST00000415749 EPHX2P34913 555 aa7.55□□□□□ -1.2
EPHA4-204ENST00000415749 CHRNEQ04844 493 aa7.55□□□□□ -1.2
EPHA4-204ENST00000415749 GRM1Q13255 1194 aa7.55□□□□□ -1.2
EPHA4-204ENST00000415749 STAT4Q14765 748 aa7.55□□□□□ -1.2
EPHA4-204ENST00000415749 MLC1Q15049 377 aa7.55□□□□□ -1.2
EPHA4-204ENST00000415749 ARTNQ5T4W7 220 aa7.55□□□□□ -1.2
EPHA4-204ENST00000415749 ACBD5Q5T8D3 534 aaPredicted RBP7.55□□□□□ -1.2
EPHA4-204ENST00000415749 HLA-DQA1Q5Y7H0 255 aa7.55□□□□□ -1.2
EPHA4-204ENST00000415749 PKN3Q6P5Z2 889 aa7.55□□□□□ -1.2
EPHA4-204ENST00000415749 ZBTB46Q86UZ6 589 aa7.55□□□□□ -1.2
EPHA4-204ENST00000415749 PNMA8AQ86V59 439 aaPredicted RBP7.55□□□□□ -1.2
EPHA4-204ENST00000415749 SPPL2CQ8IUH8 684 aa7.55□□□□□ -1.2
EPHA4-204ENST00000415749 DNAJC10Q8IXB1 793 aa7.55□□□□□ -1.2
EPHA4-204ENST00000415749 ANKS4BQ8N8V4 417 aa7.55□□□□□ -1.2
EPHA4-204ENST00000415749 OSBP2Q969R2 916 aa7.55□□□□□ -1.2
EPHA4-204ENST00000415749 IL17RAQ96F46 866 aa7.55□□□□□ -1.2
EPHA4-204ENST00000415749 MAP6Q96JE9 813 aa7.55□□□□□ -1.2
EPHA4-204ENST00000415749 ERVK13-1Q9NX77 482 aa7.55□□□□□ -1.2
EPHA4-204ENST00000415749 SFMBT1Q9UHJ3 866 aa7.55□□□□□ -1.2
EPHA4-204ENST00000415749 SOS1Q07889 1333 aaPredicted RBP7.54□□□□□ -1.2
EPHA4-204ENST00000415749 ZNF831Q5JPB2 1677 aa7.54□□□□□ -1.2
EPHA4-204ENST00000415749 NPHP3-ACAD11A0A0J9YXS1 232 aa7.54□□□□□ -1.2
EPHA4-204ENST00000415749 ZGLP1P0C6A0 271 aa7.54□□□□□ -1.2
EPHA4-204ENST00000415749 MAP2K2P36507 400 aa7.54□□□□□ -1.2
EPHA4-204ENST00000415749 KIR2DL1P43626 348 aaPredicted RBP7.54□□□□□ -1.2
EPHA4-204ENST00000415749 KIR2DL2P43627 348 aaPredicted RBP7.54□□□□□ -1.2
EPHA4-204ENST00000415749 KCNAB2Q13303 367 aa7.54□□□□□ -1.2
EPHA4-204ENST00000415749 SF1Q15637 639 aaKnown RBP7.54□□□□□ -1.2
EPHA4-204ENST00000415749 AMOTQ4VCS5 1084 aa7.54□□□□□ -1.2
EPHA4-204ENST00000415749 SLC35F1Q5T1Q4 408 aa7.54□□□□□ -1.2
EPHA4-204ENST00000415749 CYP4F22Q6NT55 531 aa7.54□□□□□ -1.2
EPHA4-204ENST00000415749 ZNF530Q6P9A1 599 aaPredicted RBP7.54□□□□□ -1.2
EPHA4-204ENST00000415749 NFXL1Q6ZNB6 911 aa7.54□□□□□ -1.2
EPHA4-204ENST00000415749 C11orf96Q7Z7L8 435 aa7.54□□□□□ -1.2
EPHA4-204ENST00000415749 PPIL6Q8IXY8 311 aa7.54□□□□□ -1.2
EPHA4-204ENST00000415749 OXR1Q8N573 874 aa7.54□□□□□ -1.2
EPHA4-204ENST00000415749 UBE2Q2Q8WVN8 375 aa7.54□□□□□ -1.2
EPHA4-204ENST00000415749 RTFDC1Q9BY42 306 aaPredicted RBP7.54□□□□□ -1.2
EPHA4-204ENST00000415749 ADAMTS10Q9H324 1103 aa7.54□□□□□ -1.2
EPHA4-204ENST00000415749 ZFP64Q9NPA5 681 aa7.54□□□□□ -1.2
EPHA4-204ENST00000415749 GPRC5CQ9NQ84 441 aa7.54□□□□□ -1.2
EPHA4-204ENST00000415749 DDX21Q9NR30 783 aaKnown RBP eCLIP7.54□□□□□ -1.2
EPHA4-204ENST00000415749 TNPO3Q9Y5L0 923 aaKnown RBP7.54□□□□□ -1.2
EPHA4-204ENST00000415749 COL5A3P25940 1745 aaPredicted RBP7.53□□□□□ -1.2
EPHA4-204ENST00000415749 TIAM2Q8IVF5 1701 aa7.53□□□□□ -1.2
EPHA4-204ENST00000415749 DICER1Q9UPY3 1922 aaKnown RBP7.53□□□□□ -1.2
EPHA4-204ENST00000415749 E2F8A0AVK6 867 aa7.53□□□□□ -1.2
EPHA4-204ENST00000415749 APPP05067 770 aa7.53□□□□□ -1.2
EPHA4-204ENST00000415749 CYP19A1P11511 503 aaPredicted RBP7.53□□□□□ -1.2
EPHA4-204ENST00000415749 PLS3P13797 630 aa7.53□□□□□ -1.2
EPHA4-204ENST00000415749 EIF4A2Q14240 407 aaKnown RBP7.53□□□□□ -1.2
EPHA4-204ENST00000415749 PRSS53Q2L4Q9 553 aa7.53□□□□□ -1.2
EPHA4-204ENST00000415749 RALGPS1Q5JS13 557 aa7.53□□□□□ -1.2
EPHA4-204ENST00000415749 C1orf141Q5JVX7 400 aa7.53□□□□□ -1.2
EPHA4-204ENST00000415749 ZPBP2Q6X784 338 aa7.53□□□□□ -1.2
EPHA4-204ENST00000415749 TCEAL8Q8IYN2 117 aa7.53□□□□□ -1.2
EPHA4-204ENST00000415749 PDZD8Q8NEN9 1154 aa7.53□□□□□ -1.2
EPHA4-204ENST00000415749 NPLOC4Q8TAT6 608 aa7.53□□□□□ -1.2
EPHA4-204ENST00000415749 SLC7A14Q8TBB6 771 aa7.53□□□□□ -1.2
EPHA4-204ENST00000415749 FRS2Q8WU20 508 aa7.53□□□□□ -1.2
EPHA4-204ENST00000415749 LINC01599Q8WXQ3 324 aa7.53□□□□□ -1.2
EPHA4-204ENST00000415749 CHMP4CQ96CF2 233 aa7.53□□□□□ -1.2
EPHA4-204ENST00000415749 MMP19Q99542 508 aa7.53□□□□□ -1.2
EPHA4-204ENST00000415749 ARPC5LQ9BPX5 153 aa7.53□□□□□ -1.2
EPHA4-204ENST00000415749 TRIM8Q9BZR9 551 aa7.53□□□□□ -1.2
EPHA4-204ENST00000415749 TRIM39Q9HCM9 518 aa7.53□□□□□ -1.2
EPHA4-204ENST00000415749 CLEC1BQ9P126 229 aa7.53□□□□□ -1.2
EPHA4-204ENST00000415749 POLKQ9UBT6 870 aa7.53□□□□□ -1.2
EPHA4-204ENST00000415749 NDOR1Q9UHB4 597 aa7.53□□□□□ -1.2
EPHA4-204ENST00000415749 ZNF180Q9UJW8 692 aa7.53□□□□□ -1.2
EPHA4-204ENST00000415749 CASP8AP2Q9UKL3 1982 aa7.52□□□□□ -1.21
EPHA4-204ENST00000415749 CARMIL3Q8ND23 1372 aa7.52□□□□□ -1.21
EPHA4-204ENST00000415749 FITM1A5D6W6 292 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms