RNA–Protein interactions for RNA: ENST00000415357.1

LINC01090-201, Transcript of long intergenic non-protein coding RNA 1090, humanhuman

TSL 3 BASIC

Gene LINC01090, Length 881 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01090-201ENST00000415357 TRMT1LQ7Z2T5 733 aaKnown RBP10.86□□□□□ -0.67
LINC01090-201ENST00000415357 KRT25Q7Z3Z0 450 aa10.86□□□□□ -0.67
LINC01090-201ENST00000415357 CCDC83Q8IWF9 413 aa10.86□□□□□ -0.67
LINC01090-201ENST00000415357 DNAJB3Q8WWF6 145 aa10.86□□□□□ -0.67
LINC01090-201ENST00000415357 SLC9A7Q96T83 725 aa10.86□□□□□ -0.67
LINC01090-201ENST00000415357 C22orf23Q9BZE7 217 aa10.86□□□□□ -0.67
LINC01090-201ENST00000415357 FAM49AQ9H0Q0 323 aaPredicted RBP10.86□□□□□ -0.67
LINC01090-201ENST00000415357 ZNF302Q9NR11 478 aa10.86□□□□□ -0.67
LINC01090-201ENST00000415357 TBC1D22BQ9NU19 505 aa10.86□□□□□ -0.67
LINC01090-201ENST00000415357 TCEAL9Q9UHQ7 104 aa10.86□□□□□ -0.67
LINC01090-201ENST00000415357 CCDC194A0A1B0GVG4 234 aa10.85□□□□□ -0.67
LINC01090-201ENST00000415357 SLC37A4O43826 429 aa10.85□□□□□ -0.67
LINC01090-201ENST00000415357 GAS7O60861 476 aa10.85□□□□□ -0.67
LINC01090-201ENST00000415357 CAND2O75155 1236 aa10.85□□□□□ -0.67
LINC01090-201ENST00000415357 CHRNA1P02708 482 aa10.85□□□□□ -0.67
LINC01090-201ENST00000415357 CA3P07451 260 aa10.85□□□□□ -0.67
LINC01090-201ENST00000415357 GHRP10912 638 aa10.85□□□□□ -0.67
LINC01090-201ENST00000415357 XBP1P17861 261 aa10.85□□□□□ -0.67
LINC01090-201ENST00000415357 KRT76Q01546 638 aa10.85□□□□□ -0.67
LINC01090-201ENST00000415357 MGAT3Q09327 533 aa10.85□□□□□ -0.67
LINC01090-201ENST00000415357 TMEM62Q0P6H9 643 aa10.85□□□□□ -0.67
LINC01090-201ENST00000415357 Q4G0T1 1027 aa10.85□□□□□ -0.67
LINC01090-201ENST00000415357 PLEKHG4Q58EX7 1191 aa10.85□□□□□ -0.67
LINC01090-201ENST00000415357 FAM26DQ5JW98 314 aa10.85□□□□□ -0.67
LINC01090-201ENST00000415357 LRCH2Q5VUJ6 765 aa10.85□□□□□ -0.67
LINC01090-201ENST00000415357 FAM160B1Q5W0V3 765 aa10.85□□□□□ -0.67
LINC01090-201ENST00000415357 FAM117BQ6P1L5 589 aa10.85□□□□□ -0.67
LINC01090-201ENST00000415357 TAF2Q6P1X5 1199 aa10.85□□□□□ -0.67
LINC01090-201ENST00000415357 RNF19BQ6ZMZ0 732 aa10.85□□□□□ -0.67
LINC01090-201ENST00000415357 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.85□□□□□ -0.673e-10■■■□□ 17.6
LINC01090-201ENST00000415357 PIK3AP1Q6ZUJ8 805 aa10.85□□□□□ -0.67
LINC01090-201ENST00000415357 HERC6Q8IVU3 1022 aa10.85□□□□□ -0.67
LINC01090-201ENST00000415357 FAM177A1Q8N128 213 aaPredicted RBP10.85□□□□□ -0.67
LINC01090-201ENST00000415357 ATP8B4Q8TF62 1192 aa10.85□□□□□ -0.67
LINC01090-201ENST00000415357 SLC5A5Q92911 643 aa10.85□□□□□ -0.67
LINC01090-201ENST00000415357 MBOAT7Q96N66 472 aa10.85□□□□□ -0.67
LINC01090-201ENST00000415357 TEKT3Q9BXF9 490 aa10.85□□□□□ -0.67
LINC01090-201ENST00000415357 UNC45AQ9H3U1 944 aa10.85□□□□□ -0.67
LINC01090-201ENST00000415357 PRDM12Q9H4Q4 367 aa10.85□□□□□ -0.67
LINC01090-201ENST00000415357 SLC28A3Q9HAS3 691 aa10.85□□□□□ -0.67
LINC01090-201ENST00000415357 GABBR1Q9UBS5 961 aa10.85□□□□□ -0.67
LINC01090-201ENST00000415357 SAMM50Q9Y512 469 aa10.85□□□□□ -0.67
LINC01090-201ENST00000415357 PCDHA11Q9Y5I1 949 aa10.85□□□□□ -0.67
LINC01090-201ENST00000415357 CDY2AQ9Y6F7 541 aa10.85□□□□□ -0.67
LINC01090-201ENST00000415357 PRUNE2Q8WUY3 3088 aa10.85□□□□□ -0.67
LINC01090-201ENST00000415357 IGSF9BQ9UPX0 1349 aa10.84□□□□□ -0.67
LINC01090-201ENST00000415357 KAT6AQ92794 2004 aa10.84□□□□□ -0.67
LINC01090-201ENST00000415357 CYP3A7-CYP3A51PA0A087WV96 503 aa10.84□□□□□ -0.67
LINC01090-201ENST00000415357 LCHNA4D1U4 455 aa10.84□□□□□ -0.67
LINC01090-201ENST00000415357 RRN3P2A6NIE6 340 aa10.84□□□□□ -0.67
LINC01090-201ENST00000415357 WDR64B1ANS9 1081 aa10.84□□□□□ -0.67
LINC01090-201ENST00000415357 ZBTB42B2RXF5 422 aa10.84□□□□□ -0.67
LINC01090-201ENST00000415357 PSMD10O75832 226 aa10.84□□□□□ -0.67
LINC01090-201ENST00000415357 PSAPP07602 524 aa10.84□□□□□ -0.67
LINC01090-201ENST00000415357 FOSL2P15408 326 aa10.84□□□□□ -0.67
LINC01090-201ENST00000415357 CYP3A7P24462 503 aa10.84□□□□□ -0.67
LINC01090-201ENST00000415357 KRT2P35908 639 aa10.84□□□□□ -0.67
LINC01090-201ENST00000415357 RBM25P49756 843 aaKnown RBP10.84□□□□□ -0.67
LINC01090-201ENST00000415357 GUCY1B3Q02153 619 aa10.84□□□□□ -0.67
LINC01090-201ENST00000415357 IKBKEQ14164 716 aa10.84□□□□□ -0.67
LINC01090-201ENST00000415357 UGCGQ16739 394 aa10.84□□□□□ -0.67
LINC01090-201ENST00000415357 CSPP1Q1MSJ5 1256 aa10.84□□□□□ -0.67
LINC01090-201ENST00000415357 PPP2R2DQ66LE6 453 aa10.84□□□□□ -0.67
LINC01090-201ENST00000415357 SPRED2Q7Z698 418 aa10.84□□□□□ -0.67
LINC01090-201ENST00000415357 NEK8Q86SG6 692 aa10.84□□□□□ -0.67
LINC01090-201ENST00000415357 CKAP2LQ8IYA6 745 aa10.84□□□□□ -0.67
LINC01090-201ENST00000415357 SMAP1Q8IYB5 467 aaPredicted RBP10.84□□□□□ -0.67
LINC01090-201ENST00000415357 ETNPPLQ8TBG4 499 aa10.84□□□□□ -0.67
LINC01090-201ENST00000415357 PHOSPHO2Q8TCD6 241 aa10.84□□□□□ -0.67
LINC01090-201ENST00000415357 WASF1Q92558 559 aa10.84□□□□□ -0.67
LINC01090-201ENST00000415357 CERS4Q9HA82 394 aa10.84□□□□□ -0.67
LINC01090-201ENST00000415357 DDX25Q9UHL0 483 aaKnown RBP10.84□□□□□ -0.67
LINC01090-201ENST00000415357 LIMCH1Q9UPQ0 1083 aa10.84□□□□□ -0.67
LINC01090-201ENST00000415357 PCDHA10Q9Y5I2 948 aa10.84□□□□□ -0.67
LINC01090-201ENST00000415357 UNC80Q8N2C7 3258 aa10.83□□□□□ -0.67
LINC01090-201ENST00000415357 ABHD14A-ACY1A0A1B0GW23 586 aa10.83□□□□□ -0.68
LINC01090-201ENST00000415357 ZNF862O60290 1169 aa10.83□□□□□ -0.68
LINC01090-201ENST00000415357 HBP1O60381 514 aa10.83□□□□□ -0.68
LINC01090-201ENST00000415357 KLRC1P26715 233 aa10.83□□□□□ -0.68
LINC01090-201ENST00000415357 SLC26A2P50443 739 aa10.83□□□□□ -0.68
LINC01090-201ENST00000415357 MRPS6P82932 125 aaKnown RBP10.83□□□□□ -0.68
LINC01090-201ENST00000415357 LPIN1Q14693 890 aa10.83□□□□□ -0.68
LINC01090-201ENST00000415357 KRT40Q6A162 431 aa10.83□□□□□ -0.68
LINC01090-201ENST00000415357 MTHFD1LQ6UB35 978 aa10.83□□□□□ -0.68
LINC01090-201ENST00000415357 MOXD1Q6UVY6 613 aa10.83□□□□□ -0.68
LINC01090-201ENST00000415357 RPAINQ86UA6 219 aa10.83□□□□□ -0.68
LINC01090-201ENST00000415357 RSPH3Q86UC2 560 aa10.83□□□□□ -0.68
LINC01090-201ENST00000415357 MYOCDQ8IZQ8 938 aa10.83□□□□□ -0.68
LINC01090-201ENST00000415357 SEPT8Q92599 483 aa10.83□□□□□ -0.68
LINC01090-201ENST00000415357 TNFRSF25Q93038 417 aa10.83□□□□□ -0.68
LINC01090-201ENST00000415357 PPP1R16BQ96T49 567 aa10.83□□□□□ -0.68
LINC01090-201ENST00000415357 RIT2Q99578 217 aa10.83□□□□□ -0.68
LINC01090-201ENST00000415357 IFIH1Q9BYX4 1025 aaKnown RBP10.83□□□□□ -0.68
LINC01090-201ENST00000415357 DISC1Q9NRI5 854 aa10.83□□□□□ -0.68
LINC01090-201ENST00000415357 PCDHA2Q9Y5H9 948 aa10.83□□□□□ -0.68
LINC01090-201ENST00000415357 MAFBQ9Y5Q3 323 aaPredicted RBP10.83□□□□□ -0.68
LINC01090-201ENST00000415357 MICAL3Q7RTP6 2002 aa10.83□□□□□ -0.68
LINC01090-201ENST00000415357 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.82□□□□□ -0.68
LINC01090-201ENST00000415357 TMEM150BA6NC51 233 aa10.82□□□□□ -0.68
LINC01090-201ENST00000415357 BTBD18B2RXH4 712 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms