RNA–Protein interactions for RNA: ENST00000415298.5

AP1S3-205, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 1 (best)

Gene AP1S3, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-205ENST00000415298 KLF18A0A0U1RQI7 1052 aa22.13■■□□□ 1.13
AP1S3-205ENST00000415298 NEK2P51955 445 aa22.13■■□□□ 1.13
AP1S3-205ENST00000415298 NSUN2Q08J23 767 aaKnown RBP eCLIP22.13■■□□□ 1.13
AP1S3-205ENST00000415298 ANKRD1Q15327 319 aa22.13■■□□□ 1.13
AP1S3-205ENST00000415298 TBC1D1Q86TI0 1168 aaPredicted RBP22.13■■□□□ 1.13
AP1S3-205ENST00000415298 FBXL16Q8N461 479 aa22.13■■□□□ 1.13
AP1S3-205ENST00000415298 TCHPQ9BT92 498 aa22.13■■□□□ 1.13
AP1S3-205ENST00000415298 SCN4AP35499 1836 aa22.13■■□□□ 1.13
AP1S3-205ENST00000415298 TRIM43BA6NCK2 446 aa22.13■■□□□ 1.13
AP1S3-205ENST00000415298 GSTT1P30711 240 aa22.13■■□□□ 1.13
AP1S3-205ENST00000415298 PCK1P35558 622 aa22.13■■□□□ 1.13
AP1S3-205ENST00000415298 RFC5P40937 340 aa22.13■■□□□ 1.13
AP1S3-205ENST00000415298 WTAPQ15007 396 aa22.13■■□□□ 1.13
AP1S3-205ENST00000415298 CLIP3Q96DZ5 547 aa22.13■■□□□ 1.13
AP1S3-205ENST00000415298 CEP95Q96GE4 821 aa22.13■■□□□ 1.13
AP1S3-205ENST00000415298 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP22.12■■□□□ 1.13
AP1S3-205ENST00000415298 A0A0U1RQJ8 604 aa22.12■■□□□ 1.13
AP1S3-205ENST00000415298 SOWAHDA6NJG2 315 aa22.12■■□□□ 1.13
AP1S3-205ENST00000415298 GOLGA8AA7E2F4 631 aa22.12■■□□□ 1.13
AP1S3-205ENST00000415298 HOXD11P31277 338 aaPredicted RBP22.12■■□□□ 1.13
AP1S3-205ENST00000415298 QPCTQ16769 361 aa22.12■■□□□ 1.13
AP1S3-205ENST00000415298 SPECC1LQ69YQ0 1117 aa22.12■■□□□ 1.13
AP1S3-205ENST00000415298 RASGRP2Q7LDG7 609 aa22.12■■□□□ 1.13
AP1S3-205ENST00000415298 SPICE1Q8N0Z3 855 aa22.12■■□□□ 1.13
AP1S3-205ENST00000415298 NEDD1Q8NHV4 660 aa22.12■■□□□ 1.13
AP1S3-205ENST00000415298 RUBCNQ92622 972 aa22.12■■□□□ 1.13
AP1S3-205ENST00000415298 NAA15Q9BXJ9 866 aaKnown RBP22.12■■□□□ 1.13
AP1S3-205ENST00000415298 STX8Q9UNK0 236 aa22.12■■□□□ 1.13
AP1S3-205ENST00000415298 DAAM1Q9Y4D1 1078 aa22.12■■□□□ 1.13
AP1S3-205ENST00000415298 WDR90Q96KV7 1748 aa22.12■■□□□ 1.13
AP1S3-205ENST00000415298 GOLGA6L10A0A0M3HER8 536 aa22.12■■□□□ 1.13
AP1S3-205ENST00000415298 HNRNPCP07910 306 aaKnown RBP eCLIP22.12■■□□□ 1.13
AP1S3-205ENST00000415298 PDIA3P30101 505 aaKnown RBP22.12■■□□□ 1.13
AP1S3-205ENST00000415298 PRKG1Q13976 671 aa22.12■■□□□ 1.13
AP1S3-205ENST00000415298 GKAP1Q5VSY0 366 aaPredicted RBP22.12■■□□□ 1.13
AP1S3-205ENST00000415298 TRAPPC11Q7Z392 1133 aa22.12■■□□□ 1.13
AP1S3-205ENST00000415298 KRT26Q7Z3Y9 468 aa22.12■■□□□ 1.13
AP1S3-205ENST00000415298 FMR1NBQ8N0W7 255 aaPredicted RBP22.12■■□□□ 1.13
AP1S3-205ENST00000415298 C1orf131Q8NDD1 294 aaKnown RBP22.12■■□□□ 1.13
AP1S3-205ENST00000415298 SLF1Q9BQI6 1058 aa22.12■■□□□ 1.13
AP1S3-205ENST00000415298 NCOA5Q9HCD5 579 aaKnown RBP22.12■■□□□ 1.13
AP1S3-205ENST00000415298 POLD4Q9HCU8 107 aa22.12■■□□□ 1.13
AP1S3-205ENST00000415298 HERC5Q9UII4 1024 aaKnown RBP22.12■■□□□ 1.13
AP1S3-205ENST00000415298 EFR3BQ9Y2G0 817 aa22.12■■□□□ 1.13
AP1S3-205ENST00000415298 R3HDM2Q9Y2K5 976 aaKnown RBP22.12■■□□□ 1.13
AP1S3-205ENST00000415298 CCT8L1PA6NM43 557 aa22.11■■□□□ 1.13
AP1S3-205ENST00000415298 TRAPPC3O43617 180 aa22.11■■□□□ 1.13
AP1S3-205ENST00000415298 ATP6V1C1P21283 382 aa22.11■■□□□ 1.13
AP1S3-205ENST00000415298 SMARCA1P28370 1054 aa22.11■■□□□ 1.13
AP1S3-205ENST00000415298 USP11P51784 963 aa22.11■■□□□ 1.13
AP1S3-205ENST00000415298 SULT2A1Q06520 285 aa22.11■■□□□ 1.13
AP1S3-205ENST00000415298 PTPN21Q16825 1174 aa22.11■■□□□ 1.13
AP1S3-205ENST00000415298 ZNF554Q86TJ5 538 aa22.11■■□□□ 1.13
AP1S3-205ENST00000415298 PEX5LQ8IYB4 626 aa22.11■■□□□ 1.13
AP1S3-205ENST00000415298 MLKLQ8NB16 471 aa22.11■■□□□ 1.13
AP1S3-205ENST00000415298 ARHGEF10LQ9HCE6 1279 aa22.11■■□□□ 1.13
AP1S3-205ENST00000415298 DLGAP2Q9P1A6 1054 aa22.11■■□□□ 1.13
AP1S3-205ENST00000415298 CLEC11AQ9Y240 323 aa22.11■■□□□ 1.13
AP1S3-205ENST00000415298 PDHA1P08559 390 aa22.11■■□□□ 1.13
AP1S3-205ENST00000415298 LIFRP42702 1097 aa22.11■■□□□ 1.13
AP1S3-205ENST00000415298 MYL5Q02045 173 aa22.11■■□□□ 1.13
AP1S3-205ENST00000415298 FMR1Q06787 632 aaKnown RBP eCLIP22.11■■□□□ 1.13
AP1S3-205ENST00000415298 CKAP4Q07065 602 aaKnown RBP22.11■■□□□ 1.13
AP1S3-205ENST00000415298 RCN1Q15293 331 aa22.11■■□□□ 1.13
AP1S3-205ENST00000415298 IFIT1BQ5T764 474 aaKnown RBP22.11■■□□□ 1.13
AP1S3-205ENST00000415298 SULF1Q8IWU6 871 aa22.11■■□□□ 1.13
AP1S3-205ENST00000415298 ARFGAP2Q8N6H7 521 aa22.11■■□□□ 1.13
AP1S3-205ENST00000415298 MMS19Q96T76 1030 aa22.11■■□□□ 1.13
AP1S3-205ENST00000415298 FAM192AQ9GZU8 254 aa22.11■■□□□ 1.13
AP1S3-205ENST00000415298 INTS13Q9NVM9 706 aa22.11■■□□□ 1.13
AP1S3-205ENST00000415298 NDUFB5O43674 189 aa22.1■■□□□ 1.13
AP1S3-205ENST00000415298 CCDC70Q6NSX1 233 aa22.1■■□□□ 1.13
AP1S3-205ENST00000415298 RAD9BQ6WBX8 426 aa22.1■■□□□ 1.13
AP1S3-205ENST00000415298 LRRC43Q8N309 656 aa22.1■■□□□ 1.13
AP1S3-205ENST00000415298 AZIN2Q96A70 460 aa22.1■■□□□ 1.13
AP1S3-205ENST00000415298 ZIM3Q96PE6 472 aa22.1■■□□□ 1.13
AP1S3-205ENST00000415298 GLIS2Q9BZE0 524 aaPredicted RBP22.1■■□□□ 1.13
AP1S3-205ENST00000415298 HPS5Q9UPZ3 1129 aa22.1■■□□□ 1.13
AP1S3-205ENST00000415298 TESPA1A2RU30 521 aaPredicted RBP22.1■■□□□ 1.13
AP1S3-205ENST00000415298 VEGFAP15692 232 aaPredicted RBP22.1■■□□□ 1.13
AP1S3-205ENST00000415298 FOXB2Q5VYV0 432 aa22.1■■□□□ 1.13
AP1S3-205ENST00000415298 MAP1SQ66K74 1059 aaPredicted RBP22.1■■□□□ 1.13
AP1S3-205ENST00000415298 TMEM53Q6P2H8 277 aa22.1■■□□□ 1.13
AP1S3-205ENST00000415298 EMBQ6PCB8 327 aa22.1■■□□□ 1.13
AP1S3-205ENST00000415298 TSEN2Q8NCE0 465 aaKnown RBP22.1■■□□□ 1.13
AP1S3-205ENST00000415298 NCSTNQ92542 709 aa22.1■■□□□ 1.13
AP1S3-205ENST00000415298 ABHD8Q96I13 439 aa22.1■■□□□ 1.13
AP1S3-205ENST00000415298 OSBPL10Q9BXB5 764 aa22.1■■□□□ 1.13
AP1S3-205ENST00000415298 MTMR7Q9Y216 660 aa22.1■■□□□ 1.13
AP1S3-205ENST00000415298 PITPNM2Q9BZ72 1349 aa22.09■■□□□ 1.13
AP1S3-205ENST00000415298 TBC1D12O60347 775 aa22.09■■□□□ 1.13
AP1S3-205ENST00000415298 GH2P01242 217 aa22.09■■□□□ 1.13
AP1S3-205ENST00000415298 MYCLP1P12525 358 aaPredicted RBP22.09■■□□□ 1.13
AP1S3-205ENST00000415298 GUCY1A2P33402 732 aa22.09■■□□□ 1.13
AP1S3-205ENST00000415298 MAP3K10Q02779 954 aa22.09■■□□□ 1.13
AP1S3-205ENST00000415298 FAAH2Q6GMR7 532 aa22.09■■□□□ 1.13
AP1S3-205ENST00000415298 APOA5Q6Q788 366 aa22.09■■□□□ 1.13
AP1S3-205ENST00000415298 SGMS1Q86VZ5 419 aa22.09■■□□□ 1.13
AP1S3-205ENST00000415298 MICU3Q86XE3 530 aa22.09■■□□□ 1.13
AP1S3-205ENST00000415298 NACC2Q96BF6 587 aa22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms