RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 KLRG2A4D1S0 409 aaPredicted RBP10.66□□□□□ -0.7
CD44-206ENST00000415148 DNM1LO00429 736 aa10.66□□□□□ -0.7
CD44-206ENST00000415148 EIF3DO15371 548 aaKnown RBP eCLIP10.66□□□□□ -0.7
CD44-206ENST00000415148 NR3C1P04150 777 aa10.66□□□□□ -0.7
CD44-206ENST00000415148 SERPINB2P05120 415 aa10.66□□□□□ -0.7
CD44-206ENST00000415148 CASP5P51878 434 aa10.66□□□□□ -0.7
CD44-206ENST00000415148 ACTN3Q08043 901 aaPredicted RBP10.66□□□□□ -0.7
CD44-206ENST00000415148 ZNF844Q08AG5 666 aa10.66□□□□□ -0.7
CD44-206ENST00000415148 HLTFQ14527 1009 aaKnown RBP eCLIP10.66□□□□□ -0.7
CD44-206ENST00000415148 FAM196AQ6ZSG2 479 aa10.66□□□□□ -0.7
CD44-206ENST00000415148 CCDC13Q8IYE1 715 aa10.66□□□□□ -0.7
CD44-206ENST00000415148 SLC30A5Q8TAD4 765 aa10.66□□□□□ -0.7
CD44-206ENST00000415148 SLC35C1Q96A29 364 aa10.66□□□□□ -0.7
CD44-206ENST00000415148 CYFIP2Q96F07 1278 aa10.66□□□□□ -0.7
CD44-206ENST00000415148 HES6Q96HZ4 224 aa10.66□□□□□ -0.7
CD44-206ENST00000415148 DDX47Q9H0S4 455 aaKnown RBP10.66□□□□□ -0.7
CD44-206ENST00000415148 FAM114A2Q9NRY5 505 aa10.66□□□□□ -0.7
CD44-206ENST00000415148 H0YHG0 523 aa10.66□□□□□ -0.7
CD44-206ENST00000415148 KRIT1O00522 736 aa10.66□□□□□ -0.7
CD44-206ENST00000415148 MPHOSPH10O00566 681 aaKnown RBP10.66□□□□□ -0.7
CD44-206ENST00000415148 AKAP3O75969 853 aa10.66□□□□□ -0.7
CD44-206ENST00000415148 EYA4O95677 639 aa10.66□□□□□ -0.7
CD44-206ENST00000415148 LMNB1P20700 586 aa10.66□□□□□ -0.7
CD44-206ENST00000415148 SREBF1P36956 1147 aa10.66□□□□□ -0.7
CD44-206ENST00000415148 STAT3P40763 770 aa10.66□□□□□ -0.7
CD44-206ENST00000415148 STAT1P42224 750 aa10.66□□□□□ -0.7
CD44-206ENST00000415148 DRP2Q13474 957 aa10.66□□□□□ -0.7
CD44-206ENST00000415148 SLC15A2Q16348 729 aa10.66□□□□□ -0.7
CD44-206ENST00000415148 NT5DC3Q86UY8 548 aa10.66□□□□□ -0.7
CD44-206ENST00000415148 ZKSCAN4Q969J2 545 aaPredicted RBP10.66□□□□□ -0.7
CD44-206ENST00000415148 BORCS6Q96GS4 357 aa10.66□□□□□ -0.7
CD44-206ENST00000415148 MKNK1Q9BUB5 465 aa10.66□□□□□ -0.7
CD44-206ENST00000415148 AMNQ9BXJ7 453 aa10.66□□□□□ -0.7
CD44-206ENST00000415148 OSBPL7Q9BZF2 842 aa10.66□□□□□ -0.7
CD44-206ENST00000415148 BCCIPQ9P287 314 aaKnown RBP eCLIP10.66□□□□□ -0.7
CD44-206ENST00000415148 DDX20Q9UHI6 824 aaKnown RBP10.66□□□□□ -0.7
CD44-206ENST00000415148 NOC2LQ9Y3T9 749 aaKnown RBP10.66□□□□□ -0.7
CD44-206ENST00000415148 ASTN1O14525 1302 aa10.65□□□□□ -0.7
CD44-206ENST00000415148 CYP3A4P08684 503 aa10.65□□□□□ -0.7
CD44-206ENST00000415148 CCDC172P0C7W6 258 aa10.65□□□□□ -0.7
CD44-206ENST00000415148 PSMC6P62333 389 aa10.65□□□□□ -0.7
CD44-206ENST00000415148 PABPC4Q13310 644 aaKnown RBP eCLIP10.65□□□□□ -0.7
CD44-206ENST00000415148 PRR16Q569H4 304 aa10.65□□□□□ -0.7
CD44-206ENST00000415148 UBAP2Q5T6F2 1119 aaKnown RBP10.65□□□□□ -0.7
CD44-206ENST00000415148 FAM228AQ86W67 206 aa10.65□□□□□ -0.7
CD44-206ENST00000415148 CABS1Q96KC9 395 aa10.65□□□□□ -0.7
CD44-206ENST00000415148 MRIQ9BWK5 157 aa10.65□□□□□ -0.7
CD44-206ENST00000415148 CELF4Q9BZC1 486 aaKnown RBP10.65□□□□□ -0.7
CD44-206ENST00000415148 VCPKMTQ9H867 229 aa10.65□□□□□ -0.7
CD44-206ENST00000415148 SLC12A6Q9UHW9 1150 aa10.65□□□□□ -0.7
CD44-206ENST00000415148 AMFRQ9UKV5 643 aa10.65□□□□□ -0.7
CD44-206ENST00000415148 NR2E1Q9Y466 385 aa10.65□□□□□ -0.7
CD44-206ENST00000415148 TMCO5BA8MYB1 307 aa10.65□□□□□ -0.71
CD44-206ENST00000415148 DDX3XO00571 662 aaKnown RBP eCLIP10.65□□□□□ -0.71
CD44-206ENST00000415148 PPP1R12BO60237 982 aaPredicted RBP10.65□□□□□ -0.71
CD44-206ENST00000415148 ATP2C2O75185 946 aa10.65□□□□□ -0.71
CD44-206ENST00000415148 CTNNA1P35221 906 aaKnown RBP10.65□□□□□ -0.71
CD44-206ENST00000415148 PSMC2P35998 433 aaKnown RBP10.65□□□□□ -0.71
CD44-206ENST00000415148 SLFN13Q68D06 897 aa10.65□□□□□ -0.71
CD44-206ENST00000415148 CDC42EP5Q6NZY7 148 aa10.65□□□□□ -0.71
CD44-206ENST00000415148 LENG9Q96B70 501 aa10.65□□□□□ -0.71
CD44-206ENST00000415148 NAP1L3Q99457 506 aaPredicted RBP10.65□□□□□ -0.71
CD44-206ENST00000415148 STK33Q9BYT3 514 aa10.65□□□□□ -0.71
CD44-206ENST00000415148 SLC40A1Q9NP59 571 aa10.65□□□□□ -0.71
CD44-206ENST00000415148 UTP11Q9Y3A2 253 aaKnown RBP10.65□□□□□ -0.71
CD44-206ENST00000415148 NCANO14594 1321 aa10.64□□□□□ -0.71
CD44-206ENST00000415148 UBE4BO95155 1302 aa10.64□□□□□ -0.71
CD44-206ENST00000415148 SPDYE3A6NKU9 549 aa10.64□□□□□ -0.71
CD44-206ENST00000415148 OPLAHO14841 1288 aa10.64□□□□□ -0.71
CD44-206ENST00000415148 DAPK3O43293 454 aa10.64□□□□□ -0.71
CD44-206ENST00000415148 TBCAO75347 108 aaKnown RBP10.64□□□□□ -0.71
CD44-206ENST00000415148 RASSF9O75901 435 aa10.64□□□□□ -0.71
CD44-206ENST00000415148 TMEM253P0C7T8 217 aa10.64□□□□□ -0.71
CD44-206ENST00000415148 EEF2P13639 858 aaKnown RBP10.64□□□□□ -0.71
CD44-206ENST00000415148 GYS1P13807 737 aa10.64□□□□□ -0.71
CD44-206ENST00000415148 MUTP22033 750 aa10.64□□□□□ -0.71
CD44-206ENST00000415148 COPB2P35606 906 aa10.64□□□□□ -0.71
CD44-206ENST00000415148 SOX5P35711 763 aa10.64□□□□□ -0.71
CD44-206ENST00000415148 EIF3BP55884 814 aaKnown RBP10.64□□□□□ -0.71
CD44-206ENST00000415148 PLCB4Q15147 1175 aa10.64□□□□□ -0.71
CD44-206ENST00000415148 DCAF17Q5H9S7 520 aaPredicted RBP10.64□□□□□ -0.71
CD44-206ENST00000415148 GJB7Q6PEY0 223 aa10.64□□□□□ -0.71
CD44-206ENST00000415148 ARMC9Q7Z3E5 817 aa10.64□□□□□ -0.71
CD44-206ENST00000415148 DAAM2Q86T65 1068 aa10.64□□□□□ -0.71
CD44-206ENST00000415148 CERS5Q8N5B7 392 aa10.64□□□□□ -0.71
CD44-206ENST00000415148 MDM1Q8TC05 714 aa10.64□□□□□ -0.71
CD44-206ENST00000415148 TEKT1Q969V4 418 aa10.64□□□□□ -0.71
CD44-206ENST00000415148 CXorf56Q9H5V9 222 aa10.64□□□□□ -0.71
CD44-206ENST00000415148 TUFT1Q9NNX1 390 aa10.64□□□□□ -0.71
CD44-206ENST00000415148 GCNT4Q9P109 453 aa10.64□□□□□ -0.71
CD44-206ENST00000415148 AMACRQ9UHK6 382 aa10.64□□□□□ -0.71
CD44-206ENST00000415148 THSD7AQ9UPZ6 1657 aa10.64□□□□□ -0.71
CD44-206ENST00000415148 GMNCA6NCL1 334 aa10.63□□□□□ -0.71
CD44-206ENST00000415148 PHF20L1A8MW92 1017 aa10.63□□□□□ -0.71
CD44-206ENST00000415148 TRIM37O94972 964 aa10.63□□□□□ -0.71
CD44-206ENST00000415148 GCNT3O95395 438 aa10.63□□□□□ -0.71
CD44-206ENST00000415148 PAEPP09466 180 aa10.63□□□□□ -0.71
CD44-206ENST00000415148 SLURP2P0DP57 97 aa10.63□□□□□ -0.71
CD44-206ENST00000415148 GALCP54803 685 aa10.63□□□□□ -0.71
CD44-206ENST00000415148 TCERG1LQ5VWI1 586 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms