RNA–Protein interactions for RNA: ENST00000414664.5

CPNE1-207, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,070 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-207ENST00000414664 AMHP03971 560 aa28.28■■■□□ 2.12
CPNE1-207ENST00000414664 VTNP04004 478 aa28.28■■■□□ 2.12
CPNE1-207ENST00000414664 XRCC6P12956 609 aaKnown RBP eCLIP28.28■■■□□ 2.12
CPNE1-207ENST00000414664 DNAJB2P25686 324 aa28.28■■■□□ 2.12
CPNE1-207ENST00000414664 RFC5P40937 340 aa28.28■■■□□ 2.12
CPNE1-207ENST00000414664 CRYBB1P53674 252 aaPredicted RBP28.28■■■□□ 2.12
CPNE1-207ENST00000414664 ZNF697Q5TEC3 545 aa28.28■■■□□ 2.12
CPNE1-207ENST00000414664 HAUS3Q68CZ6 603 aa28.28■■■□□ 2.12
CPNE1-207ENST00000414664 DTHD1Q6ZMT9 781 aa28.28■■■□□ 2.12
CPNE1-207ENST00000414664 POLR3CQ9BUI4 534 aaPredicted RBP28.28■■■□□ 2.12
CPNE1-207ENST00000414664 PBX4Q9BYU1 374 aa28.28■■■□□ 2.12
CPNE1-207ENST00000414664 ANKEF1Q9NU02 776 aa28.28■■■□□ 2.12
CPNE1-207ENST00000414664 LRWD1Q9UFC0 647 aa28.28■■■□□ 2.12
CPNE1-207ENST00000414664 NPEPPSP55786 919 aa28.27■■■□□ 2.12
CPNE1-207ENST00000414664 XKR9Q5GH70 373 aa28.27■■■□□ 2.12
CPNE1-207ENST00000414664 FERMT3Q86UX7 667 aa28.27■■■□□ 2.12
CPNE1-207ENST00000414664 HERC6Q8IVU3 1022 aa28.27■■■□□ 2.12
CPNE1-207ENST00000414664 CCDC43Q96MW1 224 aaKnown RBP28.27■■■□□ 2.12
CPNE1-207ENST00000414664 PCDHA11Q9Y5I1 949 aa28.27■■■□□ 2.12
CPNE1-207ENST00000414664 BMP15O95972 392 aa28.26■■■□□ 2.11
CPNE1-207ENST00000414664 PDIA4P13667 645 aaKnown RBP28.26■■■□□ 2.11
CPNE1-207ENST00000414664 RPA1P27694 616 aa28.26■■■□□ 2.11
CPNE1-207ENST00000414664 POLGP54098 1239 aaPredicted RBP28.26■■■□□ 2.11
CPNE1-207ENST00000414664 ATP2C1P98194 919 aaPredicted RBP28.26■■■□□ 2.11
CPNE1-207ENST00000414664 PAK2Q13177 524 aa28.26■■■□□ 2.11
CPNE1-207ENST00000414664 KIZQ2M2Z5 673 aa28.26■■■□□ 2.11
CPNE1-207ENST00000414664 CATSPER3Q86XQ3 398 aa28.26■■■□□ 2.11
CPNE1-207ENST00000414664 TIFAQ96CG3 184 aa28.26■■■□□ 2.11
CPNE1-207ENST00000414664 SIP14410 1827 aa28.26■■■□□ 2.11
CPNE1-207ENST00000414664 STX6O43752 255 aa28.25■■■□□ 2.11
CPNE1-207ENST00000414664 GAS2O43903 313 aaKnown RBP28.25■■■□□ 2.11
CPNE1-207ENST00000414664 GPR32O75388 356 aa28.25■■■□□ 2.11
CPNE1-207ENST00000414664 SPATA31C1P0DKV0 1188 aa28.25■■■□□ 2.11
CPNE1-207ENST00000414664 MUTP22033 750 aa28.25■■■□□ 2.11
CPNE1-207ENST00000414664 CD52P31358 61 aa28.25■■■□□ 2.11
CPNE1-207ENST00000414664 NLRP11P59045 1033 aaKnown RBP28.25■■■□□ 2.11
CPNE1-207ENST00000414664 DEFB123Q8N688 67 aa28.25■■■□□ 2.11
CPNE1-207ENST00000414664 ZBED2Q9BTP6 218 aa28.25■■■□□ 2.11
CPNE1-207ENST00000414664 FTHL17Q9BXU8 183 aa28.25■■■□□ 2.11
CPNE1-207ENST00000414664 AGO3Q9H9G7 860 aaKnown RBP28.25■■■□□ 2.11
CPNE1-207ENST00000414664 RPS6KA5O75582 802 aa28.24■■■□□ 2.11
CPNE1-207ENST00000414664 PBX2P40425 430 aa28.24■■■□□ 2.11
CPNE1-207ENST00000414664 DEFB103AP81534 67 aa28.24■■■□□ 2.11
CPNE1-207ENST00000414664 MKRN4PQ13434 485 aaPredicted RBP28.24■■■□□ 2.11
CPNE1-207ENST00000414664 ARL6IP4Q66PJ3 421 aaKnown RBP28.24■■■□□ 2.11
CPNE1-207ENST00000414664 IGSF22Q8N9C0 903 aa28.24■■■□□ 2.11
CPNE1-207ENST00000414664 SCLT1Q96NL6 688 aa28.24■■■□□ 2.11
CPNE1-207ENST00000414664 NACC1Q96RE7 527 aa28.24■■■□□ 2.11
CPNE1-207ENST00000414664 PPP1R16BQ96T49 567 aa28.24■■■□□ 2.11
CPNE1-207ENST00000414664 OSMRQ99650 979 aa28.24■■■□□ 2.11
CPNE1-207ENST00000414664 DHX33Q9H6R0 707 aaKnown RBP28.24■■■□□ 2.11
CPNE1-207ENST00000414664 CDHR5Q9HBB8 845 aa28.24■■■□□ 2.11
CPNE1-207ENST00000414664 SUCLA2Q9P2R7 463 aaPredicted RBP28.24■■■□□ 2.11
CPNE1-207ENST00000414664 PADI3Q9ULW8 664 aa28.24■■■□□ 2.11
CPNE1-207ENST00000414664 ZBTB39O15060 712 aa28.23■■■□□ 2.11
CPNE1-207ENST00000414664 GPR182O15218 404 aa28.23■■■□□ 2.11
CPNE1-207ENST00000414664 MED24O75448 989 aa28.23■■■□□ 2.11
CPNE1-207ENST00000414664 GPC3P51654 580 aa28.23■■■□□ 2.11
CPNE1-207ENST00000414664 RABGGTBP53611 331 aa28.23■■■□□ 2.11
CPNE1-207ENST00000414664 LIN28BQ6ZN17 250 aaKnown RBP eCLIP28.23■■■□□ 2.111e-8■■□□□ 11.7
CPNE1-207ENST00000414664 ZNF579Q8NAF0 562 aaKnown RBP28.23■■■□□ 2.11
CPNE1-207ENST00000414664 ADAMTS10Q9H324 1103 aa28.23■■■□□ 2.11
CPNE1-207ENST00000414664 ZSCAN16Q9H4T2 348 aaPredicted RBP28.23■■■□□ 2.11
CPNE1-207ENST00000414664 MTMR6Q9Y217 621 aa28.23■■■□□ 2.11
CPNE1-207ENST00000414664 MICAL3Q7RTP6 2002 aa28.23■■■□□ 2.11
CPNE1-207ENST00000414664 CCT6AP40227 531 aaKnown RBP28.22■■■□□ 2.11
CPNE1-207ENST00000414664 NFX1Q12986 1120 aaKnown RBP28.22■■■□□ 2.11
CPNE1-207ENST00000414664 DRP2Q13474 957 aa28.22■■■□□ 2.11
CPNE1-207ENST00000414664 KRT79Q5XKE5 535 aa28.22■■■□□ 2.11
CPNE1-207ENST00000414664 MYOCDQ8IZQ8 938 aa28.22■■■□□ 2.11
CPNE1-207ENST00000414664 TCP11Q8WWU5 503 aa28.22■■■□□ 2.11
CPNE1-207ENST00000414664 NLRP7Q8WX94 980 aa28.22■■■□□ 2.11
CPNE1-207ENST00000414664 SLC28A3Q9HAS3 691 aa28.22■■■□□ 2.11
CPNE1-207ENST00000414664 NOC2LQ9Y3T9 749 aaKnown RBP28.22■■■□□ 2.11
CPNE1-207ENST00000414664 TLL1O43897 1013 aa28.21■■■□□ 2.11
CPNE1-207ENST00000414664 DGAT1O75907 488 aa28.21■■■□□ 2.11
CPNE1-207ENST00000414664 EIF4BP23588 611 aaKnown RBP28.21■■■□□ 2.11
CPNE1-207ENST00000414664 RARRES1P49788 294 aa28.21■■■□□ 2.11
CPNE1-207ENST00000414664 RESTQ13127 1097 aa28.21■■■□□ 2.11
CPNE1-207ENST00000414664 EMC2Q15006 297 aa28.21■■■□□ 2.11
CPNE1-207ENST00000414664 Q7L0L9 218 aa28.21■■■□□ 2.11
CPNE1-207ENST00000414664 PIGOQ8TEQ8 1089 aa28.21■■■□□ 2.11
CPNE1-207ENST00000414664 MTRQ99707 1265 aa28.21■■■□□ 2.11
CPNE1-207ENST00000414664 DBR1Q9UK59 544 aaKnown RBP28.21■■■□□ 2.11
CPNE1-207ENST00000414664 LOXHD1Q8IVV2 1947 aa28.21■■■□□ 2.11
CPNE1-207ENST00000414664 LOC101059915A0A1B0GWI6 518 aaPredicted RBP28.2■■■□□ 2.1
CPNE1-207ENST00000414664 ENPP3O14638 875 aa28.2■■■□□ 2.1
CPNE1-207ENST00000414664 GJB5O95377 273 aa28.2■■■□□ 2.1
CPNE1-207ENST00000414664 IL17AQ16552 155 aa28.2■■■□□ 2.1
CPNE1-207ENST00000414664 ZNF410Q86VK4 478 aa28.2■■■□□ 2.1
CPNE1-207ENST00000414664 RHPN2Q8IUC4 686 aa28.2■■■□□ 2.1
CPNE1-207ENST00000414664 SNX29Q8TEQ0 813 aa28.2■■■□□ 2.1
CPNE1-207ENST00000414664 TMEM40Q8WWA1 233 aa28.2■■■□□ 2.1
CPNE1-207ENST00000414664 PSPC1Q8WXF1 523 aaKnown RBP28.2■■■□□ 2.1
CPNE1-207ENST00000414664 GCOM2Q9BZD3 368 aaPredicted RBP28.2■■■□□ 2.1
CPNE1-207ENST00000414664 NKX2-4Q9H2Z4 354 aa28.2■■■□□ 2.1
CPNE1-207ENST00000414664 SEMA6BQ9H3T3 888 aa28.2■■■□□ 2.1
CPNE1-207ENST00000414664 ERVK-5Q9HDB9 667 aa28.2■■■□□ 2.1
CPNE1-207ENST00000414664 ST3GAL5Q9UNP4 418 aa28.2■■■□□ 2.1
CPNE1-207ENST00000414664 YBX2Q9Y2T7 364 aaKnown RBP28.2■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms