RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 DIS3Q9Y2L1 958 aaKnown RBP18.61■□□□□ 0.57
PHRF1-202ENST00000413872 PCDHA13Q9Y5I0 950 aa18.61■□□□□ 0.57
PHRF1-202ENST00000413872 GSTA1P08263 222 aa18.6■□□□□ 0.57
PHRF1-202ENST00000413872 GSTA2P09210 222 aa18.6■□□□□ 0.57
PHRF1-202ENST00000413872 INPP5BP32019 993 aa18.6■□□□□ 0.57
PHRF1-202ENST00000413872 ECE1P42892 770 aa18.6■□□□□ 0.57
PHRF1-202ENST00000413872 MMP14P50281 582 aa18.6■□□□□ 0.57
PHRF1-202ENST00000413872 GUF1Q8N442 669 aaKnown RBP18.6■□□□□ 0.57
PHRF1-202ENST00000413872 ARHGEF2Q92974 986 aaKnown RBP18.6■□□□□ 0.57
PHRF1-202ENST00000413872 DNAJC12Q9UKB3 198 aa18.6■□□□□ 0.57
PHRF1-202ENST00000413872 LGALS16A8MUM7 142 aa18.6■□□□□ 0.57
PHRF1-202ENST00000413872 CPP00450 1065 aa18.6■□□□□ 0.57
PHRF1-202ENST00000413872 ATP2C1P98194 919 aaPredicted RBP18.6■□□□□ 0.57
PHRF1-202ENST00000413872 MTMR2Q13614 643 aa18.6■□□□□ 0.57
PHRF1-202ENST00000413872 MAP3K21Q5TCX8 1036 aa18.6■□□□□ 0.57
PHRF1-202ENST00000413872 RYBPQ8N488 228 aaPredicted RBP18.6■□□□□ 0.57
PHRF1-202ENST00000413872 PARK7Q99497 189 aaKnown RBP18.6■□□□□ 0.57
PHRF1-202ENST00000413872 CPS1P31327 1500 aa18.6■□□□□ 0.57
PHRF1-202ENST00000413872 CDC42EP5Q6NZY7 148 aa18.6■□□□□ 0.57
PHRF1-202ENST00000413872 DARS2Q6PI48 645 aaKnown RBP18.6■□□□□ 0.57
PHRF1-202ENST00000413872 CCDC160A6NGH7 325 aa18.6■□□□□ 0.57
PHRF1-202ENST00000413872 SLC16A4O15374 487 aa18.6■□□□□ 0.57
PHRF1-202ENST00000413872 TOGARAM2Q6ZUX3 1019 aa18.6■□□□□ 0.57
PHRF1-202ENST00000413872 VCX3BQ9H321 246 aa18.6■□□□□ 0.57
PHRF1-202ENST00000413872 EXOSC10Q01780 885 aaKnown RBP18.59■□□□□ 0.57
PHRF1-202ENST00000413872 C16orf86Q6ZW13 317 aa18.59■□□□□ 0.57
PHRF1-202ENST00000413872 TRIM42Q8IWZ5 723 aa18.59■□□□□ 0.57
PHRF1-202ENST00000413872 DNAAF3Q8N9W5 541 aa18.59■□□□□ 0.57
PHRF1-202ENST00000413872 MGARPQ8TDB4 240 aa18.59■□□□□ 0.57
PHRF1-202ENST00000413872 GDAP1L1Q96MZ0 367 aa18.59■□□□□ 0.57
PHRF1-202ENST00000413872 TRIM56Q9BRZ2 755 aaKnown RBP18.59■□□□□ 0.57
PHRF1-202ENST00000413872 GJB4Q9NTQ9 266 aa18.59■□□□□ 0.57
PHRF1-202ENST00000413872 IQSEC2Q5JU85 1478 aa18.59■□□□□ 0.57
PHRF1-202ENST00000413872 ENOSF1Q7L5Y1 443 aa18.59■□□□□ 0.57
PHRF1-202ENST00000413872 BPIFA3Q9BQP9 254 aa18.59■□□□□ 0.57
PHRF1-202ENST00000413872 ELP3Q9H9T3 547 aa18.59■□□□□ 0.57
PHRF1-202ENST00000413872 CALB1P05937 261 aa18.59■□□□□ 0.57
PHRF1-202ENST00000413872 POLR3FQ9H1D9 316 aaPredicted RBP18.59■□□□□ 0.57
PHRF1-202ENST00000413872 GOLGA8QA0A0J9YX86 632 aa18.59■□□□□ 0.57
PHRF1-202ENST00000413872 GOLGA8OA6NCC3 632 aa18.59■□□□□ 0.57
PHRF1-202ENST00000413872 GOLGA8NF8WBI6 632 aa18.59■□□□□ 0.57
PHRF1-202ENST00000413872 TBX3O15119 743 aa18.59■□□□□ 0.57
PHRF1-202ENST00000413872 EPHB4P54760 987 aa18.59■□□□□ 0.57
PHRF1-202ENST00000413872 RWDD2BP57060 319 aa18.59■□□□□ 0.57
PHRF1-202ENST00000413872 SARM1Q6SZW1 724 aa18.59■□□□□ 0.57
PHRF1-202ENST00000413872 RAB44Q7Z6P3 723 aaPredicted RBP18.59■□□□□ 0.57
PHRF1-202ENST00000413872 RAB3IPQ96QF0 476 aaPredicted RBP18.59■□□□□ 0.57
PHRF1-202ENST00000413872 EIF2AK1Q9BQI3 630 aaKnown RBP18.59■□□□□ 0.57
PHRF1-202ENST00000413872 PDS5AQ29RF7 1337 aaKnown RBP18.59■□□□□ 0.57
PHRF1-202ENST00000413872 MIF4GDA9UHW6 222 aaKnown RBP18.58■□□□□ 0.57
PHRF1-202ENST00000413872 MFAP3LO75121 409 aa18.58■□□□□ 0.57
PHRF1-202ENST00000413872 EYA4O95677 639 aa18.58■□□□□ 0.57
PHRF1-202ENST00000413872 RHPN2Q8IUC4 686 aa18.58■□□□□ 0.57
PHRF1-202ENST00000413872 VCPKMTQ9H867 229 aa18.58■□□□□ 0.57
PHRF1-202ENST00000413872 KIF9Q9HAQ2 790 aa18.58■□□□□ 0.57
PHRF1-202ENST00000413872 JPH1Q9HDC5 661 aaPredicted RBP18.58■□□□□ 0.57
PHRF1-202ENST00000413872 NDUFB10O96000 172 aa18.58■□□□□ 0.57
PHRF1-202ENST00000413872 TTC31Q49AM3 519 aaPredicted RBP18.58■□□□□ 0.57
PHRF1-202ENST00000413872 NDUFAF2Q8N183 169 aa18.58■□□□□ 0.57
PHRF1-202ENST00000413872 MICAL1Q8TDZ2 1067 aa18.58■□□□□ 0.57
PHRF1-202ENST00000413872 MAP3K14Q99558 947 aa18.58■□□□□ 0.57
PHRF1-202ENST00000413872 PTPN22Q9Y2R2 807 aa18.58■□□□□ 0.57
PHRF1-202ENST00000413872 TAF1CQ15572 869 aaPredicted RBP18.58■□□□□ 0.56
PHRF1-202ENST00000413872 CAPN12Q6ZSI9 719 aa18.58■□□□□ 0.56
PHRF1-202ENST00000413872 GAS2L3Q86XJ1 694 aa18.58■□□□□ 0.56
PHRF1-202ENST00000413872 ADAM22Q9P0K1 906 aa18.58■□□□□ 0.56
PHRF1-202ENST00000413872 SLC25A27O95847 323 aa18.58■□□□□ 0.56
PHRF1-202ENST00000413872 SMARCA1P28370 1054 aa18.58■□□□□ 0.56
PHRF1-202ENST00000413872 FAM213AQ9BRX8 229 aa18.57■□□□□ 0.56
PHRF1-202ENST00000413872 NRBP1Q9UHY1 535 aa18.57■□□□□ 0.56
PHRF1-202ENST00000413872 DIP2BQ9P265 1576 aa18.57■□□□□ 0.56
PHRF1-202ENST00000413872 MYCP01106 439 aaPredicted RBP18.57■□□□□ 0.56
PHRF1-202ENST00000413872 SLMAPQ14BN4 828 aa18.57■□□□□ 0.56
PHRF1-202ENST00000413872 PNMA8AQ86V59 439 aaPredicted RBP18.57■□□□□ 0.56
PHRF1-202ENST00000413872 FMR1NBQ8N0W7 255 aaPredicted RBP18.57■□□□□ 0.56
PHRF1-202ENST00000413872 ELMOD1Q8N336 334 aa18.57■□□□□ 0.56
PHRF1-202ENST00000413872 POTEFA5A3E0 1075 aa18.57■□□□□ 0.56
PHRF1-202ENST00000413872 TDP2O95551 362 aa18.57■□□□□ 0.56
PHRF1-202ENST00000413872 POTEIP0CG38 1075 aa18.57■□□□□ 0.56
PHRF1-202ENST00000413872 POTEGQ6S5H5 508 aa18.57■□□□□ 0.56
PHRF1-202ENST00000413872 POTEEQ6S8J3 1075 aa18.57■□□□□ 0.56
PHRF1-202ENST00000413872 ENC1O14682 589 aa18.57■□□□□ 0.56
PHRF1-202ENST00000413872 VAMP7P51809 220 aa18.57■□□□□ 0.56
PHRF1-202ENST00000413872 GOLGA8FQ08AF8 430 aa18.57■□□□□ 0.56
PHRF1-202ENST00000413872 GOLGA8DPQ0D2H9 430 aa18.57■□□□□ 0.56
PHRF1-202ENST00000413872 TFDP2Q14188 446 aa18.57■□□□□ 0.56
PHRF1-202ENST00000413872 STAG2Q8N3U4 1231 aa18.57■□□□□ 0.56
PHRF1-202ENST00000413872 SRBD1Q8N5C6 995 aaKnown RBP18.57■□□□□ 0.56
PHRF1-202ENST00000413872 ADAMTS1Q9UHI8 967 aa18.57■□□□□ 0.56
PHRF1-202ENST00000413872 ZWINTO95229 277 aa18.57■□□□□ 0.56
PHRF1-202ENST00000413872 TXNP10599 105 aaKnown RBP18.57■□□□□ 0.56
PHRF1-202ENST00000413872 PSMA2P25787 234 aa18.57■□□□□ 0.56
PHRF1-202ENST00000413872 SPATS2Q86XZ4 545 aaKnown RBP18.57■□□□□ 0.56
PHRF1-202ENST00000413872 SKA2Q8WVK7 121 aaPredicted RBP18.57■□□□□ 0.56
PHRF1-202ENST00000413872 RBM41Q96IZ5 413 aaKnown RBP18.57■□□□□ 0.56
PHRF1-202ENST00000413872 KIAA1210Q9ULL0 1709 aa18.56■□□□□ 0.56
PHRF1-202ENST00000413872 PPARGP37231 505 aaPredicted RBP18.56■□□□□ 0.56
PHRF1-202ENST00000413872 STAT5BP51692 787 aa18.56■□□□□ 0.56
PHRF1-202ENST00000413872 KRT39Q6A163 491 aa18.56■□□□□ 0.56
PHRF1-202ENST00000413872 TAB3Q8N5C8 712 aaPredicted RBP18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms