RNA–Protein interactions for RNA: ENST00000413582.6

RFFL-203, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene RFFL, Length 1,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-203ENST00000413582 KCNH7Q9NS40 1196 aa10.92□□□□□ -0.66
RFFL-203ENST00000413582 RNF19AQ9NV58 838 aa10.92□□□□□ -0.66
RFFL-203ENST00000413582 TMEM161AQ9NX61 479 aa10.92□□□□□ -0.66
RFFL-203ENST00000413582 ST3GAL5Q9UNP4 418 aa10.92□□□□□ -0.66
RFFL-203ENST00000413582 HCFC2Q9Y5Z7 792 aa10.92□□□□□ -0.66
RFFL-203ENST00000413582 NCOR2Q9Y618 2525 aa10.92□□□□□ -0.66
RFFL-203ENST00000413582 SPDYE3A6NKU9 549 aa10.91□□□□□ -0.66
RFFL-203ENST00000413582 ZBTB42B2RXF5 422 aa10.91□□□□□ -0.66
RFFL-203ENST00000413582 ASGR2P07307 311 aa10.91□□□□□ -0.66
RFFL-203ENST00000413582 KLRC1P26715 233 aa10.91□□□□□ -0.66
RFFL-203ENST00000413582 PPM1AP35813 382 aa10.91□□□□□ -0.66
RFFL-203ENST00000413582 PBX3P40426 434 aa10.91□□□□□ -0.66
RFFL-203ENST00000413582 FAM189BP81408 668 aa10.91□□□□□ -0.66
RFFL-203ENST00000413582 PTH1RQ03431 593 aa10.91□□□□□ -0.66
RFFL-203ENST00000413582 DSC3Q14574 896 aa10.91□□□□□ -0.66
RFFL-203ENST00000413582 TPRNQ4KMQ1 711 aa10.91□□□□□ -0.66
RFFL-203ENST00000413582 CWF19L1Q69YN2 538 aaKnown RBP10.91□□□□□ -0.66
RFFL-203ENST00000413582 ASTLQ6HA08 431 aaPredicted RBP10.91□□□□□ -0.66
RFFL-203ENST00000413582 KCNT2Q6UVM3 1135 aa10.91□□□□□ -0.66
RFFL-203ENST00000413582 CYP2W1Q8TAV3 490 aa10.91□□□□□ -0.66
RFFL-203ENST00000413582 MXRA8Q9BRK3 442 aa10.91□□□□□ -0.66
RFFL-203ENST00000413582 SDF4Q9BRK5 362 aa10.91□□□□□ -0.66
RFFL-203ENST00000413582 TMEM117Q9H0C3 514 aa10.91□□□□□ -0.66
RFFL-203ENST00000413582 ADAM7Q9H2U9 754 aa10.91□□□□□ -0.66
RFFL-203ENST00000413582 ELAC1Q9H777 363 aaKnown RBP10.91□□□□□ -0.66
RFFL-203ENST00000413582 PUF60Q9UHX1 559 aaKnown RBP10.91□□□□□ -0.66
RFFL-203ENST00000413582 PCDHA6Q9UN73 950 aa10.91□□□□□ -0.66
RFFL-203ENST00000413582 PCDHA8Q9Y5H6 950 aa10.91□□□□□ -0.66
RFFL-203ENST00000413582 TPRP12270 2363 aaKnown RBP10.91□□□□□ -0.66
RFFL-203ENST00000413582 OTOGLQ3ZCN5 2332 aa10.91□□□□□ -0.66
RFFL-203ENST00000413582 COL1A2P08123 1366 aa10.9□□□□□ -0.66
RFFL-203ENST00000413582 WDR81Q562E7 1941 aa10.9□□□□□ -0.66
RFFL-203ENST00000413582 IGKV6D-21A0A0A0MT36 114 aa10.9□□□□□ -0.66
RFFL-203ENST00000413582 hCG_1642624A0A1W2PR95 340 aa10.9□□□□□ -0.66
RFFL-203ENST00000413582 GPR182O15218 404 aa10.9□□□□□ -0.66
RFFL-203ENST00000413582 HBP1O60381 514 aa10.9□□□□□ -0.66
RFFL-203ENST00000413582 ATG7O95352 703 aa10.9□□□□□ -0.66
RFFL-203ENST00000413582 CCNE2O96020 404 aa10.9□□□□□ -0.66
RFFL-203ENST00000413582 GNAQP50148 359 aa10.9□□□□□ -0.66
RFFL-203ENST00000413582 SLC26A2P50443 739 aa10.9□□□□□ -0.66
RFFL-203ENST00000413582 ITIH3Q06033 890 aa10.9□□□□□ -0.66
RFFL-203ENST00000413582 KIZQ2M2Z5 673 aa10.9□□□□□ -0.66
RFFL-203ENST00000413582 ODR4Q5SWX8 454 aa10.9□□□□□ -0.66
RFFL-203ENST00000413582 MCTP2Q6DN12 878 aa10.9□□□□□ -0.66
RFFL-203ENST00000413582 CES5AQ6NT32 575 aa10.9□□□□□ -0.66
RFFL-203ENST00000413582 CMTR1Q8N1G2 835 aaKnown RBP10.9□□□□□ -0.66
RFFL-203ENST00000413582 LRRC43Q8N309 656 aa10.9□□□□□ -0.66
RFFL-203ENST00000413582 TDRD5Q8NAT2 981 aaKnown RBP10.9□□□□□ -0.66
RFFL-203ENST00000413582 NKD2Q969F2 451 aaPredicted RBP10.9□□□□□ -0.66
RFFL-203ENST00000413582 ZNF558Q96NG5 402 aa10.9□□□□□ -0.66
RFFL-203ENST00000413582 CASD1Q96PB1 797 aa10.9□□□□□ -0.66
RFFL-203ENST00000413582 PPP1R16BQ96T49 567 aa10.9□□□□□ -0.66
RFFL-203ENST00000413582 OSMRQ99650 979 aa10.9□□□□□ -0.66
RFFL-203ENST00000413582 LZTS2Q9BRK4 669 aa10.9□□□□□ -0.66
RFFL-203ENST00000413582 C2orf16Q68DN1 1984 aa10.89□□□□□ -0.67
RFFL-203ENST00000413582 C2orf71A6NGG8 1288 aa10.89□□□□□ -0.67
RFFL-203ENST00000413582 HOXA2O43364 376 aa10.89□□□□□ -0.67
RFFL-203ENST00000413582 C22orf31O95567 290 aa10.89□□□□□ -0.67
RFFL-203ENST00000413582 WEE2P0C1S8 567 aa10.89□□□□□ -0.67
RFFL-203ENST00000413582 ARP10275 920 aa10.89□□□□□ -0.67
RFFL-203ENST00000413582 GSPT1P15170 499 aaKnown RBP10.89□□□□□ -0.67
RFFL-203ENST00000413582 MTHFRP42898 656 aa10.89□□□□□ -0.67
RFFL-203ENST00000413582 ID4P47928 161 aa10.89□□□□□ -0.67
RFFL-203ENST00000413582 CLCN5P51795 746 aa10.89□□□□□ -0.67
RFFL-203ENST00000413582 CRYBB1P53674 252 aaPredicted RBP10.89□□□□□ -0.67
RFFL-203ENST00000413582 SMC1AQ14683 1233 aaKnown RBP10.89□□□□□ -0.67
RFFL-203ENST00000413582 KIAA1841Q6NSI8 718 aa10.89□□□□□ -0.67
RFFL-203ENST00000413582 TMC7Q7Z402 723 aa10.89□□□□□ -0.67
RFFL-203ENST00000413582 CCDC60Q8IWA6 550 aaPredicted RBP10.89□□□□□ -0.67
RFFL-203ENST00000413582 ZDHHC14Q8IZN3 488 aa10.89□□□□□ -0.67
RFFL-203ENST00000413582 ADSSL1Q8N142 457 aa10.89□□□□□ -0.67
RFFL-203ENST00000413582 SLC39A11Q8N1S5 342 aa10.89□□□□□ -0.67
RFFL-203ENST00000413582 MRPL43Q8N983 215 aaKnown RBP10.89□□□□□ -0.67
RFFL-203ENST00000413582 AGO4Q9HCK5 861 aaKnown RBP10.89□□□□□ -0.67
RFFL-203ENST00000413582 SPG21Q9NZD8 308 aa10.89□□□□□ -0.67
RFFL-203ENST00000413582 EPG5Q9HCE0 2579 aa10.88□□□□□ -0.67
RFFL-203ENST00000413582 SH2B2O14492 632 aaPredicted RBP10.88□□□□□ -0.67
RFFL-203ENST00000413582 BACH1O14867 736 aa10.88□□□□□ -0.67
RFFL-203ENST00000413582 CLASP2O75122 1294 aaKnown RBP10.88□□□□□ -0.67
RFFL-203ENST00000413582 GPR32O75388 356 aa10.88□□□□□ -0.67
RFFL-203ENST00000413582 RXRAP19793 462 aa10.88□□□□□ -0.67
RFFL-203ENST00000413582 KRT17Q04695 432 aa10.88□□□□□ -0.67
RFFL-203ENST00000413582 CEP55Q53EZ4 464 aa10.88□□□□□ -0.67
RFFL-203ENST00000413582 ZNF484Q5JVG2 852 aa10.88□□□□□ -0.67
RFFL-203ENST00000413582 CLLU1OSQ5K130 101 aa10.88□□□□□ -0.67
RFFL-203ENST00000413582 RARS2Q5T160 578 aaKnown RBP10.88□□□□□ -0.67
RFFL-203ENST00000413582 ABHD15Q6UXT9 468 aa10.88□□□□□ -0.67
RFFL-203ENST00000413582 TMTC3Q6ZXV5 915 aa10.88□□□□□ -0.67
RFFL-203ENST00000413582 HEATR3Q7Z4Q2 680 aa10.88□□□□□ -0.67
RFFL-203ENST00000413582 PGBD1Q96JS3 809 aa10.88□□□□□ -0.67
RFFL-203ENST00000413582 MFSD1Q9H3U5 465 aa10.88□□□□□ -0.67
RFFL-203ENST00000413582 SPTBN2O15020 2390 aa10.87□□□□□ -0.67
RFFL-203ENST00000413582 GPR179Q6PRD1 2367 aa10.87□□□□□ -0.67
RFFL-203ENST00000413582 DDX39AO00148 427 aaKnown RBP10.87□□□□□ -0.67
RFFL-203ENST00000413582 MEIS1O00470 390 aa10.87□□□□□ -0.67
RFFL-203ENST00000413582 VTNP04004 478 aa10.87□□□□□ -0.67
RFFL-203ENST00000413582 ATP4AP20648 1035 aa10.87□□□□□ -0.67
RFFL-203ENST00000413582 COL9A3Q14050 684 aaPredicted RBP10.87□□□□□ -0.67
RFFL-203ENST00000413582 FAM160B1Q5W0V3 765 aa10.87□□□□□ -0.67
RFFL-203ENST00000413582 WWC2Q6AWC2 1192 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms