RNA–Protein interactions for RNA: ENST00000413539.6

DYSF-210, Transcript of dysferlin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DYSF, Length 6,769 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DYSF-210ENST00000413539 EIF3BP55884 814 aaKnown RBP16.06■□□□□ 0.16
DYSF-210ENST00000413539 CCNYL1Q8N7R7 359 aa16.06■□□□□ 0.16
DYSF-210ENST00000413539 CDCA7Q9BWT1 371 aaPredicted RBP16.06■□□□□ 0.16
DYSF-210ENST00000413539 ALG13Q9NP73 1137 aaKnown RBP16.06■□□□□ 0.16
DYSF-210ENST00000413539 SNX5Q9Y5X3 404 aa16.06■□□□□ 0.16
DYSF-210ENST00000413539 MAFGO15525 162 aa16.06■□□□□ 0.16
DYSF-210ENST00000413539 CUL1Q13616 776 aa16.06■□□□□ 0.16
DYSF-210ENST00000413539 LBRQ14739 615 aaKnown RBP16.06■□□□□ 0.16
DYSF-210ENST00000413539 SH2B2O14492 632 aaPredicted RBP16.06■□□□□ 0.16
DYSF-210ENST00000413539 LMNAP02545 664 aaKnown RBP16.06■□□□□ 0.16
DYSF-210ENST00000413539 COPS2P61201 443 aa16.06■□□□□ 0.16
DYSF-210ENST00000413539 MXD4Q14582 209 aaPredicted RBP16.06■□□□□ 0.16
DYSF-210ENST00000413539 SLC27A3Q5K4L6 730 aa16.06■□□□□ 0.16
DYSF-210ENST00000413539 ARMC9Q7Z3E5 817 aa16.06■□□□□ 0.16
DYSF-210ENST00000413539 ZSWIM5Q9P217 1185 aa16.06■□□□□ 0.16
DYSF-210ENST00000413539 ESYT3A0FGR9 886 aa16.05■□□□□ 0.16
DYSF-210ENST00000413539 PLEKHA8P1O95397 391 aa16.05■□□□□ 0.16
DYSF-210ENST00000413539 PAMP19021 973 aa16.05■□□□□ 0.16
DYSF-210ENST00000413539 PCYT1AP49585 367 aa16.05■□□□□ 0.16
DYSF-210ENST00000413539 SLFNL1Q499Z3 407 aa16.05■□□□□ 0.16
DYSF-210ENST00000413539 IFT43Q96FT9 208 aa16.05■□□□□ 0.16
DYSF-210ENST00000413539 PRDM5Q9NQX1 630 aaPredicted RBP16.05■□□□□ 0.16
DYSF-210ENST00000413539 SLC17A8Q8NDX2 589 aa16.05■□□□□ 0.16
DYSF-210ENST00000413539 KLC2Q9H0B6 622 aa16.05■□□□□ 0.16
DYSF-210ENST00000413539 STX18Q9P2W9 335 aaKnown RBP16.05■□□□□ 0.16
DYSF-210ENST00000413539 HDAC6Q9UBN7 1215 aa16.05■□□□□ 0.16
DYSF-210ENST00000413539 KIF24Q5T7B8 1368 aa16.05■□□□□ 0.16
DYSF-210ENST00000413539 MFAP3LO75121 409 aa16.05■□□□□ 0.16
DYSF-210ENST00000413539 PDE8BO95263 885 aa16.05■□□□□ 0.16
DYSF-210ENST00000413539 TADA2BQ86TJ2 420 aa16.05■□□□□ 0.16
DYSF-210ENST00000413539 WDR75Q8IWA0 830 aaKnown RBP16.05■□□□□ 0.16
DYSF-210ENST00000413539 PHKG2P15735 406 aa16.05■□□□□ 0.16
DYSF-210ENST00000413539 ALKBH5Q6P6C2 394 aaKnown RBP16.05■□□□□ 0.16
DYSF-210ENST00000413539 TGS1Q96RS0 853 aaKnown RBP16.05■□□□□ 0.16
DYSF-210ENST00000413539 KIFC3Q9BVG8 833 aa16.05■□□□□ 0.16
DYSF-210ENST00000413539 SRPRBQ9Y5M8 271 aaKnown RBP16.05■□□□□ 0.16
DYSF-210ENST00000413539 RNF103-CHMP3A0A140T963 221 aa16.05■□□□□ 0.16
DYSF-210ENST00000413539 NFRKBQ6P4R8 1299 aa16.05■□□□□ 0.16
DYSF-210ENST00000413539 RINLQ6ZS11 566 aa16.05■□□□□ 0.16
DYSF-210ENST00000413539 RFWD2Q8NHY2 731 aa16.05■□□□□ 0.16
DYSF-210ENST00000413539 LZICQ8WZA0 190 aa16.05■□□□□ 0.16
DYSF-210ENST00000413539 NAF1Q96HR8 494 aaKnown RBP16.05■□□□□ 0.16
DYSF-210ENST00000413539 TTC25Q96NG3 672 aa16.05■□□□□ 0.16
DYSF-210ENST00000413539 TRAPPC8Q9Y2L5 1435 aa16.05■□□□□ 0.16
DYSF-210ENST00000413539 CTIFO43310 598 aaKnown RBP16.05■□□□□ 0.16
DYSF-210ENST00000413539 EIF2AK2P19525 551 aaKnown RBP16.05■□□□□ 0.16
DYSF-210ENST00000413539 ADD2P35612 726 aa16.05■□□□□ 0.16
DYSF-210ENST00000413539 MAGEA9P43362 315 aa16.05■□□□□ 0.16
DYSF-210ENST00000413539 ARL13BQ3SXY8 428 aa16.05■□□□□ 0.16
DYSF-210ENST00000413539 ERFEQ4G0M1 354 aa16.05■□□□□ 0.16
DYSF-210ENST00000413539 DHX38Q92620 1227 aaKnown RBP16.05■□□□□ 0.16
DYSF-210ENST00000413539 RNF25Q96BH1 459 aaPredicted RBP16.05■□□□□ 0.16
DYSF-210ENST00000413539 ZNF668Q96K58 619 aaPredicted RBP16.05■□□□□ 0.16
DYSF-210ENST00000413539 ADAM33Q9BZ11 813 aa16.05■□□□□ 0.16
DYSF-210ENST00000413539 DNAJC12Q9UKB3 198 aa16.05■□□□□ 0.16
DYSF-210ENST00000413539 MYO1CO00159 1063 aa16.04■□□□□ 0.16
DYSF-210ENST00000413539 PMS2P54278 862 aa16.04■□□□□ 0.16
DYSF-210ENST00000413539 UBE3CQ15386 1083 aa16.04■□□□□ 0.16
DYSF-210ENST00000413539 PDXDC2PQ6P474 469 aa16.04■□□□□ 0.16
DYSF-210ENST00000413539 SLC26A7Q8TE54 656 aa16.04■□□□□ 0.16
DYSF-210ENST00000413539 FAM49AQ9H0Q0 323 aaPredicted RBP16.04■□□□□ 0.16
DYSF-210ENST00000413539 OSBPP22059 807 aa16.04■□□□□ 0.16
DYSF-210ENST00000413539 EFTUD2Q15029 972 aaKnown RBP eCLIP16.04■□□□□ 0.16
DYSF-210ENST00000413539 TMEM247A6NEH6 219 aa16.04■□□□□ 0.16
DYSF-210ENST00000413539 PYGLP06737 847 aa16.04■□□□□ 0.16
DYSF-210ENST00000413539 AP1B1Q10567 949 aa16.04■□□□□ 0.16
DYSF-210ENST00000413539 TEX2Q8IWB9 1127 aa16.04■□□□□ 0.16
DYSF-210ENST00000413539 CCNE1P24864 410 aa16.04■□□□□ 0.16
DYSF-210ENST00000413539 LRRC8EQ6NSJ5 796 aa16.04■□□□□ 0.16
DYSF-210ENST00000413539 ATP8B3O60423 1300 aa16.04■□□□□ 0.16
DYSF-210ENST00000413539 PCCAP05165 728 aaPredicted RBP16.04■□□□□ 0.16
DYSF-210ENST00000413539 OCM2P0CE71 109 aa16.04■□□□□ 0.16
DYSF-210ENST00000413539 OCMP0CE72 109 aaPredicted RBP16.04■□□□□ 0.16
DYSF-210ENST00000413539 BMP3P12645 472 aa16.04■□□□□ 0.16
DYSF-210ENST00000413539 SOX11P35716 441 aa16.04■□□□□ 0.16
DYSF-210ENST00000413539 RAD23BP54727 409 aa16.04■□□□□ 0.16
DYSF-210ENST00000413539 THNSL1Q8IYQ7 743 aa16.04■□□□□ 0.16
DYSF-210ENST00000413539 WDR11Q9BZH6 1224 aa16.04■□□□□ 0.16
DYSF-210ENST00000413539 HPS4Q9NQG7 708 aa16.04■□□□□ 0.16
DYSF-210ENST00000413539 PYGBP11216 843 aa16.03■□□□□ 0.16
DYSF-210ENST00000413539 FSCBQ5H9T9 825 aa16.03■□□□□ 0.16
DYSF-210ENST00000413539 GPATCH4Q5T3I0 446 aaKnown RBP16.03■□□□□ 0.16
DYSF-210ENST00000413539 PPM1NQ8N819 430 aa16.03■□□□□ 0.16
DYSF-210ENST00000413539 B4GALNT2Q8NHY0 566 aa16.03■□□□□ 0.16
DYSF-210ENST00000413539 SAAL1Q96ER3 474 aa16.03■□□□□ 0.16
DYSF-210ENST00000413539 PCSK1NQ9UHG2 260 aa16.03■□□□□ 0.16
DYSF-210ENST00000413539 ERVV-2B6SEH9 535 aa16.03■□□□□ 0.16
DYSF-210ENST00000413539 ARHGEF9O43307 516 aa16.03■□□□□ 0.16
DYSF-210ENST00000413539 ARL4CP56559 192 aa16.03■□□□□ 0.16
DYSF-210ENST00000413539 RESTQ13127 1097 aa16.03■□□□□ 0.16
DYSF-210ENST00000413539 CDC37Q16543 378 aaPredicted RBP16.03■□□□□ 0.16
DYSF-210ENST00000413539 ICA1LQ8NDH6 482 aa16.03■□□□□ 0.16
DYSF-210ENST00000413539 CNOT8Q9UFF9 292 aaKnown RBP16.03■□□□□ 0.16
DYSF-210ENST00000413539 PSAPP07602 524 aa16.03■□□□□ 0.16
DYSF-210ENST00000413539 AP2B1P63010 937 aa16.03■□□□□ 0.16
DYSF-210ENST00000413539 PJA2O43164 708 aa16.03■□□□□ 0.16
DYSF-210ENST00000413539 KCNA4P22459 653 aa16.03■□□□□ 0.16
DYSF-210ENST00000413539 ATXN3P54252 364 aaPredicted RBP16.03■□□□□ 0.16
DYSF-210ENST00000413539 MAP3K15Q6ZN16 1313 aa16.03■□□□□ 0.16
DYSF-210ENST00000413539 KDELC2Q7Z4H8 507 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms