RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 SP7Q8TDD2 431 aaPredicted RBP7.16□□□□□ -1.26
USP54-202ENST00000413442 TMX3Q96JJ7 454 aa7.16□□□□□ -1.26
USP54-202ENST00000413442 NACC1Q96RE7 527 aa7.16□□□□□ -1.26
USP54-202ENST00000413442 POLR3CQ9BUI4 534 aaPredicted RBP7.16□□□□□ -1.26
USP54-202ENST00000413442 PLVAPQ9BX97 442 aa7.16□□□□□ -1.26
USP54-202ENST00000413442 GCOM2Q9BZD3 368 aaPredicted RBP7.16□□□□□ -1.26
USP54-202ENST00000413442 TTYH1Q9H313 450 aaPredicted RBP7.16□□□□□ -1.26
USP54-202ENST00000413442 RGS18Q9NS28 235 aa7.16□□□□□ -1.26
USP54-202ENST00000413442 VAV3Q9UKW4 847 aa7.16□□□□□ -1.26
USP54-202ENST00000413442 PADI3Q9ULW8 664 aa7.16□□□□□ -1.26
USP54-202ENST00000413442 SMC3Q9UQE7 1217 aa7.16□□□□□ -1.26
USP54-202ENST00000413442 TTC3P53804 2025 aa7.16□□□□□ -1.26
USP54-202ENST00000413442 RALGAPA2Q2PPJ7 1873 aa7.15□□□□□ -1.26
USP54-202ENST00000413442 C5orf67F2Z3F1 127 aa7.15□□□□□ -1.26
USP54-202ENST00000413442 H3BQV1 296 aa7.15□□□□□ -1.26
USP54-202ENST00000413442 ADAMTS3O15072 1205 aa7.15□□□□□ -1.26
USP54-202ENST00000413442 ZNF862O60290 1169 aa7.15□□□□□ -1.26
USP54-202ENST00000413442 JAK2O60674 1132 aa7.15□□□□□ -1.26
USP54-202ENST00000413442 GPR32O75388 356 aa7.15□□□□□ -1.26
USP54-202ENST00000413442 DGAT1O75907 488 aa7.15□□□□□ -1.26
USP54-202ENST00000413442 SLITRK3O94933 977 aa7.15□□□□□ -1.26
USP54-202ENST00000413442 STBD1O95210 358 aa7.15□□□□□ -1.26
USP54-202ENST00000413442 LARGE1O95461 756 aa7.15□□□□□ -1.26
USP54-202ENST00000413442 RPA1P27694 616 aa7.15□□□□□ -1.26
USP54-202ENST00000413442 FXR2P51116 673 aaKnown RBP eCLIP7.15□□□□□ -1.26
USP54-202ENST00000413442 PRKCEQ02156 737 aa7.15□□□□□ -1.26
USP54-202ENST00000413442 SPIRE1Q08AE8 756 aa7.15□□□□□ -1.26
USP54-202ENST00000413442 CUL4AQ13619 759 aa7.15□□□□□ -1.26
USP54-202ENST00000413442 TFDP1Q14186 410 aa7.15□□□□□ -1.26
USP54-202ENST00000413442 LARP1BQ659C4 914 aaKnown RBP7.15□□□□□ -1.26
USP54-202ENST00000413442 PDE12Q6L8Q7 609 aaKnown RBP7.15□□□□□ -1.26
USP54-202ENST00000413442 RUFY4Q6ZNE9 571 aa7.15□□□□□ -1.26
USP54-202ENST00000413442 ANO5Q75V66 913 aa7.15□□□□□ -1.26
USP54-202ENST00000413442 BRAPQ7Z569 592 aa7.15□□□□□ -1.26
USP54-202ENST00000413442 SRGAP1Q7Z6B7 1085 aa7.15□□□□□ -1.26
USP54-202ENST00000413442 CMTR2Q8IYT2 770 aaKnown RBP7.15□□□□□ -1.26
USP54-202ENST00000413442 CRIPAKQ8N1N5 446 aa7.15□□□□□ -1.26
USP54-202ENST00000413442 METTL13Q8N6R0 699 aa7.15□□□□□ -1.26
USP54-202ENST00000413442 OXER1Q8TDS5 423 aa7.15□□□□□ -1.26
USP54-202ENST00000413442 SYMPKQ92797 1274 aaKnown RBP7.15□□□□□ -1.26
USP54-202ENST00000413442 P2RX5Q93086 422 aa7.15□□□□□ -1.26
USP54-202ENST00000413442 WNT8BQ93098 351 aa7.15□□□□□ -1.26
USP54-202ENST00000413442 GUCD1Q96NT3 240 aa7.15□□□□□ -1.26
USP54-202ENST00000413442 NFKBIZQ9BYH8 718 aa7.15□□□□□ -1.26
USP54-202ENST00000413442 LMAN2LQ9H0V9 348 aa7.15□□□□□ -1.26
USP54-202ENST00000413442 DHX33Q9H6R0 707 aaKnown RBP7.15□□□□□ -1.26
USP54-202ENST00000413442 CYP26B1Q9NR63 512 aa7.15□□□□□ -1.26
USP54-202ENST00000413442 AAASQ9NRG9 546 aa7.15□□□□□ -1.26
USP54-202ENST00000413442 DBR1Q9UK59 544 aaKnown RBP7.15□□□□□ -1.26
USP54-202ENST00000413442 COG5Q9UP83 839 aa7.15□□□□□ -1.26
USP54-202ENST00000413442 PCDHB7Q9Y5E2 793 aa7.15□□□□□ -1.26
USP54-202ENST00000413442 PHLPP2Q6ZVD8 1323 aa7.15□□□□□ -1.26
USP54-202ENST00000413442 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.14□□□□□ -1.27
USP54-202ENST00000413442 DENND3A2RUS2 1198 aa7.14□□□□□ -1.27
USP54-202ENST00000413442 GRXCR1A8MXD5 290 aa7.14□□□□□ -1.27
USP54-202ENST00000413442 SLC37A4O43826 429 aa7.14□□□□□ -1.27
USP54-202ENST00000413442 ZNF623O75123 536 aa7.14□□□□□ -1.27
USP54-202ENST00000413442 PPFIA3O75145 1194 aa7.14□□□□□ -1.27
USP54-202ENST00000413442 DGKIO75912 1065 aa7.14□□□□□ -1.27
USP54-202ENST00000413442 CA3P07451 260 aa7.14□□□□□ -1.27
USP54-202ENST00000413442 OR52Z1P0C646 297 aa7.14□□□□□ -1.27
USP54-202ENST00000413442 GHRP10912 638 aa7.14□□□□□ -1.27
USP54-202ENST00000413442 DARSP14868 501 aaKnown RBP7.14□□□□□ -1.27
USP54-202ENST00000413442 FOSL2P15408 326 aa7.14□□□□□ -1.27
USP54-202ENST00000413442 SFPQP23246 707 aaKnown RBP eCLIP7.14□□□□□ -1.27
USP54-202ENST00000413442 YWHABP31946 246 aaKnown RBP7.14□□□□□ -1.27
USP54-202ENST00000413442 TXKP42681 527 aa7.14□□□□□ -1.27
USP54-202ENST00000413442 SARSP49591 514 aaKnown RBP7.14□□□□□ -1.27
USP54-202ENST00000413442 RAB27AP51159 221 aa7.14□□□□□ -1.27
USP54-202ENST00000413442 NLRP11P59045 1033 aaKnown RBP7.14□□□□□ -1.27
USP54-202ENST00000413442 TAP1Q03518 808 aa7.14□□□□□ -1.27
USP54-202ENST00000413442 NFX1Q12986 1120 aaKnown RBP7.14□□□□□ -1.27
USP54-202ENST00000413442 GRIN2CQ14957 1233 aa7.14□□□□□ -1.27
USP54-202ENST00000413442 PTPROQ16827 1216 aa7.14□□□□□ -1.27
USP54-202ENST00000413442 IFNLR1Q8IU57 520 aaPredicted RBP7.14□□□□□ -1.27
USP54-202ENST00000413442 MYOCDQ8IZQ8 938 aa7.14□□□□□ -1.27
USP54-202ENST00000413442 FIBCD1Q8N539 461 aa7.14□□□□□ -1.27
USP54-202ENST00000413442 MCPH1Q8NEM0 835 aa7.14□□□□□ -1.27
USP54-202ENST00000413442 ATXN2LQ8WWM7 1075 aaKnown RBP7.14□□□□□ -1.27
USP54-202ENST00000413442 PSPC1Q8WXF1 523 aaKnown RBP7.14□□□□□ -1.27
USP54-202ENST00000413442 CLP1Q92989 425 aaKnown RBP7.14□□□□□ -1.27
USP54-202ENST00000413442 SNX21Q969T3 373 aa7.14□□□□□ -1.27
USP54-202ENST00000413442 ZNF689Q96CS4 500 aaPredicted RBP7.14□□□□□ -1.27
USP54-202ENST00000413442 CEP170P1Q96L14 293 aa7.14□□□□□ -1.27
USP54-202ENST00000413442 AK8Q96MA6 479 aa7.14□□□□□ -1.27
USP54-202ENST00000413442 CEP89Q96ST8 783 aa7.14□□□□□ -1.27
USP54-202ENST00000413442 YME1L1Q96TA2 773 aa7.14□□□□□ -1.27
USP54-202ENST00000413442 EIF2AK1Q9BQI3 630 aaKnown RBP7.14□□□□□ -1.27
USP54-202ENST00000413442 TIPINQ9BVW5 301 aa7.14□□□□□ -1.27
USP54-202ENST00000413442 NT5C3AQ9H0P0 336 aa7.14□□□□□ -1.27
USP54-202ENST00000413442 FAM49AQ9H0Q0 323 aaPredicted RBP7.14□□□□□ -1.27
USP54-202ENST00000413442 NKX2-4Q9H2Z4 354 aa7.14□□□□□ -1.27
USP54-202ENST00000413442 ADAMTS10Q9H324 1103 aa7.14□□□□□ -1.27
USP54-202ENST00000413442 ZSCAN16Q9H4T2 348 aaPredicted RBP7.14□□□□□ -1.27
USP54-202ENST00000413442 SUGCTQ9HAC7 445 aa7.14□□□□□ -1.27
USP54-202ENST00000413442 C17orf75Q9HAS0 396 aa7.14□□□□□ -1.27
USP54-202ENST00000413442 ERVK-5Q9HDB9 667 aa7.14□□□□□ -1.27
USP54-202ENST00000413442 UBN1Q9NPG3 1134 aa7.14□□□□□ -1.27
USP54-202ENST00000413442 TMEM161AQ9NX61 479 aa7.14□□□□□ -1.27
USP54-202ENST00000413442 SUCLA2Q9P2R7 463 aaPredicted RBP7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms