RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 AGBL5Q8NDL9 886 aa6.14□□□□□ -1.43
HMGB3P31-201ENST00000413333 AUTS2Q8WXX7 1259 aa6.14□□□□□ -1.43
HMGB3P31-201ENST00000413333 TOE1Q96GM8 510 aaKnown RBP6.14□□□□□ -1.43
HMGB3P31-201ENST00000413333 RAX2Q96IS3 184 aa6.14□□□□□ -1.43
HMGB3P31-201ENST00000413333 KCTD10Q9H3F6 313 aa6.14□□□□□ -1.43
HMGB3P31-201ENST00000413333 PRDM12Q9H4Q4 367 aa6.14□□□□□ -1.43
HMGB3P31-201ENST00000413333 BTBD7Q9P203 1132 aa6.14□□□□□ -1.43
HMGB3P31-201ENST00000413333 FRMPD2Q68DX3 1309 aaPredicted RBP6.14□□□□□ -1.43
HMGB3P31-201ENST00000413333 CTNND1O60716 968 aaKnown RBP6.13□□□□□ -1.43
HMGB3P31-201ENST00000413333 WNT11O96014 354 aa6.13□□□□□ -1.43
HMGB3P31-201ENST00000413333 LRG1P02750 347 aa6.13□□□□□ -1.43
HMGB3P31-201ENST00000413333 MYBP10242 640 aa6.13□□□□□ -1.43
HMGB3P31-201ENST00000413333 MTHFD2P13995 350 aa6.13□□□□□ -1.43
HMGB3P31-201ENST00000413333 PTGS1P23219 599 aa6.13□□□□□ -1.43
HMGB3P31-201ENST00000413333 AKAP5P24588 427 aa6.13□□□□□ -1.43
HMGB3P31-201ENST00000413333 STAT5AP42229 794 aa6.13□□□□□ -1.43
HMGB3P31-201ENST00000413333 SLC5A3P53794 718 aa6.13□□□□□ -1.43
HMGB3P31-201ENST00000413333 MRPS9P82933 396 aaKnown RBP6.13□□□□□ -1.43
HMGB3P31-201ENST00000413333 ALDH6A1Q02252 535 aaKnown RBP6.13□□□□□ -1.43
HMGB3P31-201ENST00000413333 ROM1Q03395 351 aa6.13□□□□□ -1.43
HMGB3P31-201ENST00000413333 UAP1L1Q3KQV9 507 aa6.13□□□□□ -1.43
HMGB3P31-201ENST00000413333 CD276Q5ZPR3 534 aa6.13□□□□□ -1.43
HMGB3P31-201ENST00000413333 KIAA1841Q6NSI8 718 aa6.13□□□□□ -1.43
HMGB3P31-201ENST00000413333 KCNK18Q7Z418 384 aa6.13□□□□□ -1.43
HMGB3P31-201ENST00000413333 EXOC8Q8IYI6 725 aa6.13□□□□□ -1.43
HMGB3P31-201ENST00000413333 ALG3Q92685 438 aa6.13□□□□□ -1.43
HMGB3P31-201ENST00000413333 DDX11Q96FC9 970 aa6.13□□□□□ -1.43
HMGB3P31-201ENST00000413333 SLC12A5Q9H2X9 1139 aa6.13□□□□□ -1.43
HMGB3P31-201ENST00000413333 ZNF277Q9NRM2 450 aaPredicted RBP6.13□□□□□ -1.43
HMGB3P31-201ENST00000413333 RBPJLQ9UBG7 517 aa6.13□□□□□ -1.43
HMGB3P31-201ENST00000413333 USP18Q9UMW8 372 aa6.13□□□□□ -1.43
HMGB3P31-201ENST00000413333 FAM50BQ9Y247 325 aa6.13□□□□□ -1.43
HMGB3P31-201ENST00000413333 YBX2Q9Y2T7 364 aaKnown RBP6.13□□□□□ -1.43
HMGB3P31-201ENST00000413333 LOC102724159A0A0B4J2E5 919 aa6.12□□□□□ -1.43
HMGB3P31-201ENST00000413333 KIAA1324LA8MWY0 1029 aaPredicted RBP6.12□□□□□ -1.43
HMGB3P31-201ENST00000413333 NFIBO00712 420 aa6.12□□□□□ -1.43
HMGB3P31-201ENST00000413333 PCDH8O95206 1070 aa6.12□□□□□ -1.43
HMGB3P31-201ENST00000413333 IGHA1P01876 353 aa6.12□□□□□ -1.43
HMGB3P31-201ENST00000413333 NBPF7P0C2Y1 421 aaPredicted RBP6.12□□□□□ -1.43
HMGB3P31-201ENST00000413333 PDE6BP35913 854 aa6.12□□□□□ -1.43
HMGB3P31-201ENST00000413333 TRIM25Q14258 630 aaKnown RBP6.12□□□□□ -1.43
HMGB3P31-201ENST00000413333 NOLC1Q14978 699 aaKnown RBP eCLIP6.12□□□□□ -1.43
HMGB3P31-201ENST00000413333 PWP2Q15269 919 aaKnown RBP6.12□□□□□ -1.43
HMGB3P31-201ENST00000413333 TEPPQ6URK8 271 aa6.12□□□□□ -1.43
HMGB3P31-201ENST00000413333 LRSAM1Q6UWE0 723 aa6.12□□□□□ -1.43
HMGB3P31-201ENST00000413333 FAM126BQ8IXS8 530 aa6.12□□□□□ -1.43
HMGB3P31-201ENST00000413333 GRAMD1CQ8IYS0 662 aa6.12□□□□□ -1.43
HMGB3P31-201ENST00000413333 SLC35G2Q8TBE7 412 aa6.12□□□□□ -1.43
HMGB3P31-201ENST00000413333 SSH1Q8WYL5 1049 aa6.12□□□□□ -1.43
HMGB3P31-201ENST00000413333 TSPAN17Q96FV3 270 aa6.12□□□□□ -1.43
HMGB3P31-201ENST00000413333 FOXB1Q99853 325 aa6.12□□□□□ -1.43
HMGB3P31-201ENST00000413333 GTPBP4Q9BZE4 634 aaKnown RBP6.12□□□□□ -1.43
HMGB3P31-201ENST00000413333 IFT122Q9HBG6 1241 aa6.12□□□□□ -1.43
HMGB3P31-201ENST00000413333 PCMTD2Q9NV79 361 aa6.12□□□□□ -1.43
HMGB3P31-201ENST00000413333 TUBD1Q9UJT1 453 aa6.12□□□□□ -1.43
HMGB3P31-201ENST00000413333 MYPNQ86TC9 1320 aa6.11□□□□□ -1.43
HMGB3P31-201ENST00000413333 ADAMTS4O75173 837 aa6.11□□□□□ -1.43
HMGB3P31-201ENST00000413333 MPIG6BO95866 241 aa6.11□□□□□ -1.43
HMGB3P31-201ENST00000413333 AFMP43652 599 aa6.11□□□□□ -1.43
HMGB3P31-201ENST00000413333 ADKP55263 362 aaKnown RBP6.11□□□□□ -1.43
HMGB3P31-201ENST00000413333 PURAQ00577 322 aaKnown RBP6.11□□□□□ -1.43
HMGB3P31-201ENST00000413333 GBX1Q14549 363 aa6.11□□□□□ -1.43
HMGB3P31-201ENST00000413333 MUM1Q2TAK8 710 aa6.11□□□□□ -1.43
HMGB3P31-201ENST00000413333 PLEKHN1Q494U1 663 aaPredicted RBP6.11□□□□□ -1.43
HMGB3P31-201ENST00000413333 COBLL1Q53SF7 1204 aa6.11□□□□□ -1.43
HMGB3P31-201ENST00000413333 ZC3H14Q6PJT7 736 aaKnown RBP6.11□□□□□ -1.43
HMGB3P31-201ENST00000413333 ETV3LQ6ZN32 361 aa6.11□□□□□ -1.43
HMGB3P31-201ENST00000413333 THEMISQ8N1K5 641 aaPredicted RBP6.11□□□□□ -1.43
HMGB3P31-201ENST00000413333 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.11□□□□□ -1.43
HMGB3P31-201ENST00000413333 CALML6Q8TD86 181 aa6.11□□□□□ -1.43
HMGB3P31-201ENST00000413333 RPGRQ92834 1020 aaKnown RBP6.11□□□□□ -1.43
HMGB3P31-201ENST00000413333 INTS4Q96HW7 963 aaKnown RBP6.11□□□□□ -1.43
HMGB3P31-201ENST00000413333 KIRREL1Q96J84 757 aa6.11□□□□□ -1.43
HMGB3P31-201ENST00000413333 RNF38Q9H0F5 515 aa6.11□□□□□ -1.43
HMGB3P31-201ENST00000413333 WNT8AQ9H1J5 351 aa6.11□□□□□ -1.43
HMGB3P31-201ENST00000413333 C1orf112Q9NSG2 853 aa6.11□□□□□ -1.43
HMGB3P31-201ENST00000413333 KLHL14Q9P2G3 628 aa6.11□□□□□ -1.43
HMGB3P31-201ENST00000413333 SERPINB13Q9UIV8 391 aa6.11□□□□□ -1.43
HMGB3P31-201ENST00000413333 TMPRSS11EQ9UL52 423 aa6.11□□□□□ -1.43
HMGB3P31-201ENST00000413333 NUMBLQ9Y6R0 609 aa6.11□□□□□ -1.43
HMGB3P31-201ENST00000413333 OR14I1A6ND48 311 aa6.1□□□□□ -1.43
HMGB3P31-201ENST00000413333 POU2F2P09086 479 aa6.1□□□□□ -1.43
HMGB3P31-201ENST00000413333 ENO2P09104 434 aaPredicted RBP6.1□□□□□ -1.43
HMGB3P31-201ENST00000413333 TRIM27P14373 513 aa6.1□□□□□ -1.43
HMGB3P31-201ENST00000413333 MAPKAPK2P49137 400 aa6.1□□□□□ -1.43
HMGB3P31-201ENST00000413333 PFKPQ01813 784 aa6.1□□□□□ -1.43
HMGB3P31-201ENST00000413333 PPARAQ07869 468 aa6.1□□□□□ -1.43
HMGB3P31-201ENST00000413333 SPIDRQ14159 915 aa6.1□□□□□ -1.43
HMGB3P31-201ENST00000413333 FYB2Q5VWT5 728 aa6.1□□□□□ -1.43
HMGB3P31-201ENST00000413333 MBNL2Q5VZF2 373 aaKnown RBP6.1□□□□□ -1.43
HMGB3P31-201ENST00000413333 IL31Q6EBC2 164 aa6.1□□□□□ -1.43
HMGB3P31-201ENST00000413333 VASNQ6EMK4 673 aa6.1□□□□□ -1.43
HMGB3P31-201ENST00000413333 LILRA6Q6PI73 481 aa6.1□□□□□ -1.43
HMGB3P31-201ENST00000413333 B3GNT9Q6UX72 402 aa6.1□□□□□ -1.43
HMGB3P31-201ENST00000413333 TMC5Q6UXY8 1006 aa6.1□□□□□ -1.43
HMGB3P31-201ENST00000413333 CD300LDQ6UXZ3 194 aa6.1□□□□□ -1.43
HMGB3P31-201ENST00000413333 AMIGO3Q86WK7 504 aa6.1□□□□□ -1.43
HMGB3P31-201ENST00000413333 MIB1Q86YT6 1006 aa6.1□□□□□ -1.43
HMGB3P31-201ENST00000413333 FAM26EQ8N5C1 309 aa6.1□□□□□ -1.43
HMGB3P31-201ENST00000413333 WDR48Q8TAF3 677 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms