RNA–Protein interactions for RNA: ENST00000412615.6

TRAFD1-202, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRAFD1, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-202ENST00000412615 TNIP1Q15025 636 aa12.55□□□□□ -0.4
TRAFD1-202ENST00000412615 ALKBH5Q6P6C2 394 aaKnown RBP12.55□□□□□ -0.4
TRAFD1-202ENST00000412615 GSPT2Q8IYD1 628 aaKnown RBP12.55□□□□□ -0.4
TRAFD1-202ENST00000412615 MS4A14Q96JA4 679 aa12.55□□□□□ -0.4
TRAFD1-202ENST00000412615 ZFP91Q96JP5 570 aaPredicted RBP12.55□□□□□ -0.4
TRAFD1-202ENST00000412615 FIZ1Q96SL8 496 aa12.55□□□□□ -0.4
TRAFD1-202ENST00000412615 LXNQ9BS40 222 aa12.55□□□□□ -0.4
TRAFD1-202ENST00000412615 SMARCAL1Q9NZC9 954 aa12.55□□□□□ -0.4
TRAFD1-202ENST00000412615 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.55□□□□□ -0.4
TRAFD1-202ENST00000412615 CCPG1Q9ULG6 757 aa12.55□□□□□ -0.4
TRAFD1-202ENST00000412615 ZNRF3Q9ULT6 936 aa12.55□□□□□ -0.4
TRAFD1-202ENST00000412615 FRMD4BQ9Y2L6 1034 aa12.55□□□□□ -0.4
TRAFD1-202ENST00000412615 ATP8B3O60423 1300 aa12.54□□□□□ -0.4
TRAFD1-202ENST00000412615 SYF2O95926 243 aaKnown RBP12.54□□□□□ -0.4
TRAFD1-202ENST00000412615 BCRP11274 1271 aa12.54□□□□□ -0.4
TRAFD1-202ENST00000412615 STAT1P42224 750 aa12.54□□□□□ -0.4
TRAFD1-202ENST00000412615 CDAN1Q8IWY9 1227 aa12.54□□□□□ -0.4
TRAFD1-202ENST00000412615 TAF4BQ92750 862 aa12.54□□□□□ -0.4
TRAFD1-202ENST00000412615 GDAP1L1Q96MZ0 367 aa12.54□□□□□ -0.4
TRAFD1-202ENST00000412615 GLIS2Q9BZE0 524 aaPredicted RBP12.54□□□□□ -0.4
TRAFD1-202ENST00000412615 AGPAT3Q9NRZ7 376 aa12.54□□□□□ -0.4
TRAFD1-202ENST00000412615 RBM12Q9NTZ6 932 aaKnown RBP12.54□□□□□ -0.4
TRAFD1-202ENST00000412615 DMAC2Q9NW81 257 aa12.54□□□□□ -0.4
TRAFD1-202ENST00000412615 WRAP73Q9P2S5 460 aaPredicted RBP12.54□□□□□ -0.4
TRAFD1-202ENST00000412615 SMCHD1A6NHR9 2005 aa12.54□□□□□ -0.4
TRAFD1-202ENST00000412615 CES2O00748 559 aa12.54□□□□□ -0.4
TRAFD1-202ENST00000412615 PHACTR2O75167 634 aa12.54□□□□□ -0.4
TRAFD1-202ENST00000412615 TNFRSF8P28908 595 aa12.54□□□□□ -0.4
TRAFD1-202ENST00000412615 PPP2R5AQ15172 486 aa12.54□□□□□ -0.4
TRAFD1-202ENST00000412615 MCF2L2Q86YR7 1114 aa12.54□□□□□ -0.4
TRAFD1-202ENST00000412615 NIM1KQ8IY84 436 aa12.54□□□□□ -0.4
TRAFD1-202ENST00000412615 GOLGA6L1Q8N7Z2 621 aa12.54□□□□□ -0.4
TRAFD1-202ENST00000412615 ZBTB9Q96C00 473 aa12.54□□□□□ -0.4
TRAFD1-202ENST00000412615 INTUQ9ULD6 942 aa12.54□□□□□ -0.4
TRAFD1-202ENST00000412615 RGPD3A6NKT7 1758 aaPredicted RBP12.53□□□□□ -0.4
TRAFD1-202ENST00000412615 RGPD4Q7Z3J3 1758 aa12.53□□□□□ -0.4
TRAFD1-202ENST00000412615 GFPT2O94808 682 aa12.53□□□□□ -0.4
TRAFD1-202ENST00000412615 NOP2P46087 812 aaKnown RBP12.53□□□□□ -0.4
TRAFD1-202ENST00000412615 FMO5P49326 533 aa12.53□□□□□ -0.4
TRAFD1-202ENST00000412615 EPHB4P54760 987 aa12.53□□□□□ -0.4
TRAFD1-202ENST00000412615 SLC7A5Q01650 507 aa12.53□□□□□ -0.4
TRAFD1-202ENST00000412615 RPS6KA1Q15418 735 aa12.53□□□□□ -0.4
TRAFD1-202ENST00000412615 EMBQ6PCB8 327 aa12.53□□□□□ -0.4
TRAFD1-202ENST00000412615 NIPA1Q7RTP0 329 aa12.53□□□□□ -0.4
TRAFD1-202ENST00000412615 MIER3Q7Z3K6 550 aa12.53□□□□□ -0.4
TRAFD1-202ENST00000412615 FMNL3Q8IVF7 1028 aa12.53□□□□□ -0.4
TRAFD1-202ENST00000412615 IFT20Q8IY31 132 aa12.53□□□□□ -0.4
TRAFD1-202ENST00000412615 PRPF38AQ8NAV1 312 aaKnown RBP12.53□□□□□ -0.4
TRAFD1-202ENST00000412615 AGBL1Q96MI9 1066 aa12.53□□□□□ -0.4
TRAFD1-202ENST00000412615 RNF40O75150 1001 aa12.53□□□□□ -0.4
TRAFD1-202ENST00000412615 H2AFZP0C0S5 128 aa12.53□□□□□ -0.4
TRAFD1-202ENST00000412615 ITGB5P18084 799 aa12.53□□□□□ -0.4
TRAFD1-202ENST00000412615 INPP5BP32019 993 aa12.53□□□□□ -0.4
TRAFD1-202ENST00000412615 MYBPC2Q14324 1141 aa12.53□□□□□ -0.4
TRAFD1-202ENST00000412615 H2AFVQ71UI9 128 aa12.53□□□□□ -0.4
TRAFD1-202ENST00000412615 SND1Q7KZF4 910 aaKnown RBP eCLIP12.53□□□□□ -0.49e-6■■□□□ 12.1
TRAFD1-202ENST00000412615 KSR1Q8IVT5 923 aa12.53□□□□□ -0.4
TRAFD1-202ENST00000412615 SYCP3Q8IZU3 236 aa12.53□□□□□ -0.4
TRAFD1-202ENST00000412615 BANK1Q8NDB2 785 aa12.53□□□□□ -0.4
TRAFD1-202ENST00000412615 LMBR1Q8WVP7 490 aa12.53□□□□□ -0.4
TRAFD1-202ENST00000412615 CAMKK2Q96RR4 588 aa12.53□□□□□ -0.4
TRAFD1-202ENST00000412615 HINFPQ9BQA5 517 aa12.53□□□□□ -0.4
TRAFD1-202ENST00000412615 ZNF341Q9BYN7 854 aa12.53□□□□□ -0.4
TRAFD1-202ENST00000412615 STK33Q9BYT3 514 aa12.53□□□□□ -0.4
TRAFD1-202ENST00000412615 IKZF4Q9H2S9 585 aa12.53□□□□□ -0.4
TRAFD1-202ENST00000412615 KCNH7Q9NS40 1196 aa12.53□□□□□ -0.4
TRAFD1-202ENST00000412615 PGAP2Q9UHJ9 254 aa12.53□□□□□ -0.4
TRAFD1-202ENST00000412615 DAAM1Q9Y4D1 1078 aa12.53□□□□□ -0.4
TRAFD1-202ENST00000412615 ZC3H4Q9UPT8 1303 aaKnown RBP12.53□□□□□ -0.4
TRAFD1-202ENST00000412615 TNS1Q9HBL0 1735 aaKnown RBP12.52□□□□□ -0.4
TRAFD1-202ENST00000412615 GOLGA6BA6NDN3 693 aa12.52□□□□□ -0.41
TRAFD1-202ENST00000412615 HIP1RO75146 1068 aa12.52□□□□□ -0.41
TRAFD1-202ENST00000412615 P4HBP07237 508 aaKnown RBP12.52□□□□□ -0.41
TRAFD1-202ENST00000412615 DNA2P51530 1060 aa12.52□□□□□ -0.41
TRAFD1-202ENST00000412615 CYP2J2P51589 502 aa12.52□□□□□ -0.41
TRAFD1-202ENST00000412615 EN1Q05925 392 aaPredicted RBP12.52□□□□□ -0.41
TRAFD1-202ENST00000412615 COG2Q14746 738 aa12.52□□□□□ -0.41
TRAFD1-202ENST00000412615 GJB7Q6PEY0 223 aa12.52□□□□□ -0.41
TRAFD1-202ENST00000412615 PADI6Q6TGC4 694 aa12.52□□□□□ -0.41
TRAFD1-202ENST00000412615 SLC9A9Q8IVB4 645 aa12.52□□□□□ -0.41
TRAFD1-202ENST00000412615 PBKQ96KB5 322 aa12.52□□□□□ -0.41
TRAFD1-202ENST00000412615 INPP4AQ96PE3 977 aaPredicted RBP12.52□□□□□ -0.41
TRAFD1-202ENST00000412615 LARSQ9P2J5 1176 aaKnown RBP12.52□□□□□ -0.41
TRAFD1-202ENST00000412615 AJAP1Q9UKB5 411 aaPredicted RBP12.52□□□□□ -0.41
TRAFD1-202ENST00000412615 NENFQ9UMX5 172 aa12.52□□□□□ -0.41
TRAFD1-202ENST00000412615 RPTORQ8N122 1335 aa12.52□□□□□ -0.41
TRAFD1-202ENST00000412615 ZNF536O15090 1300 aa12.52□□□□□ -0.41
TRAFD1-202ENST00000412615 A0A0A6YYK5 440 aaPredicted RBP12.52□□□□□ -0.41
TRAFD1-202ENST00000412615 WDR46O15213 610 aaKnown RBP12.52□□□□□ -0.41
TRAFD1-202ENST00000412615 CCDC172P0C7W6 258 aa12.52□□□□□ -0.41
TRAFD1-202ENST00000412615 SOX5P35711 763 aa12.52□□□□□ -0.41
TRAFD1-202ENST00000412615 GGCXP38435 758 aa12.52□□□□□ -0.41
TRAFD1-202ENST00000412615 LPAR1Q92633 364 aa12.52□□□□□ -0.41
TRAFD1-202ENST00000412615 HOOK2Q96ED9 719 aa12.52□□□□□ -0.41
TRAFD1-202ENST00000412615 ZBED3Q96IU2 234 aaPredicted RBP12.52□□□□□ -0.41
TRAFD1-202ENST00000412615 STRA6Q9BX79 667 aa12.52□□□□□ -0.41
TRAFD1-202ENST00000412615 FAM204AQ9H8W3 233 aa12.52□□□□□ -0.41
TRAFD1-202ENST00000412615 DNAJC12Q9UKB3 198 aa12.52□□□□□ -0.41
TRAFD1-202ENST00000412615 PACSIN2Q9UNF0 486 aaPredicted RBP12.52□□□□□ -0.41
TRAFD1-202ENST00000412615 DDX39AO00148 427 aaKnown RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms