RNA–Protein interactions for RNA: ENST00000412587.5

PBRM1-209, Transcript of polybromo 1, humanhuman

TSL 1 (best)

Gene PBRM1, Length 4,766 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-209ENST00000412587 ARMCX3Q9UH62 379 aaPredicted RBP9.14□□□□□ -0.95
PBRM1-209ENST00000412587 KIAA1024Q9UPX6 916 aa9.14□□□□□ -0.95
PBRM1-209ENST00000412587 R3HDM2Q9Y2K5 976 aaKnown RBP9.14□□□□□ -0.95
PBRM1-209ENST00000412587 CPS1P31327 1500 aa9.14□□□□□ -0.95
PBRM1-209ENST00000412587 MMP1P03956 469 aa9.14□□□□□ -0.95
PBRM1-209ENST00000412587 CYP2D6P10635 497 aa9.14□□□□□ -0.95
PBRM1-209ENST00000412587 VHLP40337 213 aa9.14□□□□□ -0.95
PBRM1-209ENST00000412587 USP4Q13107 963 aa9.14□□□□□ -0.95
PBRM1-209ENST00000412587 RABL6Q3YEC7 729 aaPredicted RBP9.14□□□□□ -0.95
PBRM1-209ENST00000412587 SMIM5Q71RC9 77 aa9.14□□□□□ -0.95
PBRM1-209ENST00000412587 FAM160B2Q86V87 743 aa9.14□□□□□ -0.95
PBRM1-209ENST00000412587 KIAA2013Q8IYS2 634 aa9.14□□□□□ -0.95
PBRM1-209ENST00000412587 TMCO5AQ8N6Q1 288 aa9.14□□□□□ -0.95
PBRM1-209ENST00000412587 CSRNP2Q9H175 543 aa9.14□□□□□ -0.95
PBRM1-209ENST00000412587 ANKZF1Q9H8Y5 726 aa9.14□□□□□ -0.95
PBRM1-209ENST00000412587 K7ENM7 598 aa9.14□□□□□ -0.95
PBRM1-209ENST00000412587 PPP6R2O75170 966 aa9.14□□□□□ -0.95
PBRM1-209ENST00000412587 LIG4P49917 911 aa9.14□□□□□ -0.95
PBRM1-209ENST00000412587 SNX16P57768 344 aa9.14□□□□□ -0.95
PBRM1-209ENST00000412587 DHX9Q08211 1270 aaKnown RBP9.14□□□□□ -0.95
PBRM1-209ENST00000412587 GRIK3Q13003 919 aa9.14□□□□□ -0.95
PBRM1-209ENST00000412587 AOC3Q16853 763 aa9.14□□□□□ -0.95
PBRM1-209ENST00000412587 SESTD1Q86VW0 696 aa9.14□□□□□ -0.95
PBRM1-209ENST00000412587 GPIHBP1Q8IV16 184 aa9.14□□□□□ -0.95
PBRM1-209ENST00000412587 SP8Q8IXZ3 490 aa9.14□□□□□ -0.95
PBRM1-209ENST00000412587 TRIML2Q8N7C3 387 aa9.14□□□□□ -0.95
PBRM1-209ENST00000412587 BTBD7Q9P203 1132 aa9.14□□□□□ -0.95
PBRM1-209ENST00000412587 IGF2BP3O00425 579 aaKnown RBP eCLIP9.13□□□□□ -0.95
PBRM1-209ENST00000412587 MAN1A2O60476 641 aa9.13□□□□□ -0.95
PBRM1-209ENST00000412587 RPN1P04843 607 aaKnown RBP9.13□□□□□ -0.95
PBRM1-209ENST00000412587 MYBL1P10243 752 aa9.13□□□□□ -0.95
PBRM1-209ENST00000412587 ITIH3Q06033 890 aa9.13□□□□□ -0.95
PBRM1-209ENST00000412587 ZNF449Q6P9G9 518 aa9.13□□□□□ -0.95
PBRM1-209ENST00000412587 BARGINQ6ZT62 677 aa9.13□□□□□ -0.95
PBRM1-209ENST00000412587 AK8Q96MA6 479 aa9.13□□□□□ -0.95
PBRM1-209ENST00000412587 ZNF577Q9BSK1 485 aa9.13□□□□□ -0.95
PBRM1-209ENST00000412587 WDR11Q9BZH6 1224 aa9.13□□□□□ -0.95
PBRM1-209ENST00000412587 MAGEF1Q9HAY2 307 aa9.13□□□□□ -0.95
PBRM1-209ENST00000412587 SLC39A2Q9NP94 309 aa9.13□□□□□ -0.95
PBRM1-209ENST00000412587 SH3GLB1Q9Y371 365 aa9.13□□□□□ -0.95
PBRM1-209ENST00000412587 DIP2AQ14689 1571 aa9.13□□□□□ -0.95
PBRM1-209ENST00000412587 MYO3AQ8NEV4 1616 aa9.13□□□□□ -0.95
PBRM1-209ENST00000412587 RBM47A0AV96 593 aaKnown RBP9.13□□□□□ -0.95
PBRM1-209ENST00000412587 KRIT1O00522 736 aa9.13□□□□□ -0.95
PBRM1-209ENST00000412587 POLGP54098 1239 aaPredicted RBP9.13□□□□□ -0.95
PBRM1-209ENST00000412587 BASP1P80723 227 aaKnown RBP9.13□□□□□ -0.95
PBRM1-209ENST00000412587 GPSM2P81274 684 aa9.13□□□□□ -0.95
PBRM1-209ENST00000412587 MORC3Q14149 939 aa9.13□□□□□ -0.95
PBRM1-209ENST00000412587 PTPN21Q16825 1174 aa9.13□□□□□ -0.95
PBRM1-209ENST00000412587 ARHGAP44Q17R89 818 aa9.13□□□□□ -0.95
PBRM1-209ENST00000412587 WLSQ5T9L3 541 aa9.13□□□□□ -0.95
PBRM1-209ENST00000412587 SFMBT2Q5VUG0 894 aa9.13□□□□□ -0.95
PBRM1-209ENST00000412587 MIS18BP1Q6P0N0 1132 aa9.13□□□□□ -0.95
PBRM1-209ENST00000412587 MAB21L3Q8N8X9 362 aa9.13□□□□□ -0.95
PBRM1-209ENST00000412587 PGBD1Q96JS3 809 aa9.13□□□□□ -0.95
PBRM1-209ENST00000412587 FAM84BQ96KN1 310 aaPredicted RBP9.13□□□□□ -0.95
PBRM1-209ENST00000412587 MAK16Q9BXY0 300 aaKnown RBP9.13□□□□□ -0.95
PBRM1-209ENST00000412587 CUEDC2Q9H467 287 aa9.13□□□□□ -0.95
PBRM1-209ENST00000412587 PCDHA5Q9Y5H7 936 aa9.13□□□□□ -0.95
PBRM1-209ENST00000412587 PABPN1LA6NDY0 278 aaKnown RBP9.13□□□□□ -0.95
PBRM1-209ENST00000412587 KCNJ18B7U540 433 aa9.13□□□□□ -0.95
PBRM1-209ENST00000412587 IPO5O00410 1097 aaKnown RBP9.13□□□□□ -0.95
PBRM1-209ENST00000412587 DNAJC6O75061 913 aa9.13□□□□□ -0.95
PBRM1-209ENST00000412587 LARGE1O95461 756 aa9.13□□□□□ -0.95
PBRM1-209ENST00000412587 GFAPP14136 432 aa9.13□□□□□ -0.95
PBRM1-209ENST00000412587 TMOD1P28289 359 aa9.13□□□□□ -0.95
PBRM1-209ENST00000412587 SERPINB6P35237 376 aa9.13□□□□□ -0.95
PBRM1-209ENST00000412587 TBL3Q12788 808 aaKnown RBP9.13□□□□□ -0.95
PBRM1-209ENST00000412587 KCNJ12Q14500 433 aa9.13□□□□□ -0.95
PBRM1-209ENST00000412587 FAM160B1Q5W0V3 765 aa9.13□□□□□ -0.95
PBRM1-209ENST00000412587 LRIG3Q6UXM1 1119 aa9.13□□□□□ -0.95
PBRM1-209ENST00000412587 RRAGAQ7L523 313 aa9.13□□□□□ -0.95
PBRM1-209ENST00000412587 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.13□□□□□ -0.95
PBRM1-209ENST00000412587 FAXDC2Q96IV6 333 aa9.13□□□□□ -0.95
PBRM1-209ENST00000412587 ADPGKQ9BRR6 497 aa9.13□□□□□ -0.95
PBRM1-209ENST00000412587 DCP1AQ9NPI6 582 aaPredicted RBP9.13□□□□□ -0.95
PBRM1-209ENST00000412587 TACC3Q9Y6A5 838 aa9.13□□□□□ -0.95
PBRM1-209ENST00000412587 LRRIQ4A6NIV6 560 aa9.13□□□□□ -0.95
PBRM1-209ENST00000412587 SPAG7O75391 227 aa9.13□□□□□ -0.95
PBRM1-209ENST00000412587 PRPF6O94906 941 aaKnown RBP9.13□□□□□ -0.95
PBRM1-209ENST00000412587 ESRRBO95718 433 aa9.13□□□□□ -0.95
PBRM1-209ENST00000412587 CBX3Q13185 183 aa9.13□□□□□ -0.95
PBRM1-209ENST00000412587 CDC37Q16543 378 aaPredicted RBP9.13□□□□□ -0.95
PBRM1-209ENST00000412587 TBC1D10BQ4KMP7 808 aaPredicted RBP9.13□□□□□ -0.95
PBRM1-209ENST00000412587 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.13□□□□□ -0.956e-6■■■■■ 28.1
PBRM1-209ENST00000412587 PLA2G12BQ9BX93 195 aa9.13□□□□□ -0.95
PBRM1-209ENST00000412587 ZNF341Q9BYN7 854 aa9.13□□□□□ -0.95
PBRM1-209ENST00000412587 C10orf88Q9H8K7 445 aa9.13□□□□□ -0.95
PBRM1-209ENST00000412587 KRT38O76015 456 aa9.12□□□□□ -0.95
PBRM1-209ENST00000412587 ADARP55265 1226 aaKnown RBP9.12□□□□□ -0.95
PBRM1-209ENST00000412587 SKOR1P84550 965 aa9.12□□□□□ -0.95
PBRM1-209ENST00000412587 ODR4Q5SWX8 454 aa9.12□□□□□ -0.95
PBRM1-209ENST00000412587 SPATA31A5Q5VU36 1347 aa9.12□□□□□ -0.95
PBRM1-209ENST00000412587 IRGCQ6NXR0 463 aa9.12□□□□□ -0.95
PBRM1-209ENST00000412587 SPATA31A7Q8IWB4 1347 aa9.12□□□□□ -0.95
PBRM1-209ENST00000412587 CCDC117Q8IWD4 279 aaPredicted RBP9.12□□□□□ -0.95
PBRM1-209ENST00000412587 ZNF34Q8IZ26 560 aa9.12□□□□□ -0.95
PBRM1-209ENST00000412587 SYCE1Q8N0S2 351 aa9.12□□□□□ -0.95
PBRM1-209ENST00000412587 GALNT15Q8N3T1 639 aa9.12□□□□□ -0.95
PBRM1-209ENST00000412587 NOA1Q8NC60 698 aaKnown RBP9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms