RNA–Protein interactions for RNA: ENST00000411993.1

HDAC9-205, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 626 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-205ENST00000411993 SDSP20132 328 aa6.86□□□□□ -1.31
HDAC9-205ENST00000411993 ROM1Q03395 351 aa6.86□□□□□ -1.31
HDAC9-205ENST00000411993 TBR1Q16650 682 aa6.86□□□□□ -1.31
HDAC9-205ENST00000411993 CFAP100Q494V2 611 aa6.86□□□□□ -1.31
HDAC9-205ENST00000411993 TRIM68Q6AZZ1 485 aa6.86□□□□□ -1.31
HDAC9-205ENST00000411993 SPRED1Q7Z699 444 aa6.86□□□□□ -1.31
HDAC9-205ENST00000411993 FUKQ8N0W3 1084 aa6.86□□□□□ -1.31
HDAC9-205ENST00000411993 SYNPOQ8N3V7 929 aa6.86□□□□□ -1.31
HDAC9-205ENST00000411993 OR14K1Q8NGZ2 314 aa6.86□□□□□ -1.31
HDAC9-205ENST00000411993 FOXRED1Q96CU9 486 aaPredicted RBP6.86□□□□□ -1.31
HDAC9-205ENST00000411993 MAGEC2Q9UBF1 373 aaPredicted RBP6.86□□□□□ -1.31
HDAC9-205ENST00000411993 UBA6A0AVT1 1052 aaPredicted RBP6.85□□□□□ -1.31
HDAC9-205ENST00000411993 TRAF5O00463 557 aa6.85□□□□□ -1.31
HDAC9-205ENST00000411993 RFPL3O75679 317 aa6.85□□□□□ -1.31
HDAC9-205ENST00000411993 COMTP21964 271 aa6.85□□□□□ -1.31
HDAC9-205ENST00000411993 SLC6A3Q01959 620 aa6.85□□□□□ -1.31
HDAC9-205ENST00000411993 TCEA2Q15560 299 aa6.85□□□□□ -1.31
HDAC9-205ENST00000411993 CDCA2Q69YH5 1023 aaPredicted RBP6.85□□□□□ -1.31
HDAC9-205ENST00000411993 HOMER1Q86YM7 354 aa6.85□□□□□ -1.31
HDAC9-205ENST00000411993 KIAA1958Q8N8K9 716 aa6.85□□□□□ -1.31
HDAC9-205ENST00000411993 ADOQ96SZ5 270 aa6.85□□□□□ -1.31
HDAC9-205ENST00000411993 TMPRSS5Q9H3S3 457 aa6.85□□□□□ -1.31
HDAC9-205ENST00000411993 CBX4O00257 560 aa6.84□□□□□ -1.31
HDAC9-205ENST00000411993 MATN2O00339 956 aa6.84□□□□□ -1.31
HDAC9-205ENST00000411993 DVL2O14641 736 aa6.84□□□□□ -1.31
HDAC9-205ENST00000411993 MAFO75444 373 aaPredicted RBP6.84□□□□□ -1.31
HDAC9-205ENST00000411993 PRLP01236 227 aa6.84□□□□□ -1.31
HDAC9-205ENST00000411993 CYP17A1P05093 508 aa6.84□□□□□ -1.31
HDAC9-205ENST00000411993 ZXDAP98168 799 aa6.84□□□□□ -1.31
HDAC9-205ENST00000411993 PRKD1Q15139 912 aaPredicted RBP6.84□□□□□ -1.31
HDAC9-205ENST00000411993 SLFN12LQ6IEE8 588 aa6.84□□□□□ -1.31
HDAC9-205ENST00000411993 POLNQ7Z5Q5 900 aa6.84□□□□□ -1.31
HDAC9-205ENST00000411993 NPM2Q86SE8 214 aaKnown RBP6.84□□□□□ -1.31
HDAC9-205ENST00000411993 PLA2G12BQ9BX93 195 aa6.84□□□□□ -1.31
HDAC9-205ENST00000411993 B4GALT6Q9UBX8 382 aa6.84□□□□□ -1.31
HDAC9-205ENST00000411993 RPS19P39019 145 aaKnown RBP6.83□□□□□ -1.32
HDAC9-205ENST00000411993 RGS3P49796 1198 aa6.83□□□□□ -1.32
HDAC9-205ENST00000411993 R3HDM1Q15032 1099 aaKnown RBP6.83□□□□□ -1.32
HDAC9-205ENST00000411993 SPDYAQ5MJ70 313 aa6.83□□□□□ -1.32
HDAC9-205ENST00000411993 TTC38Q5R3I4 469 aa6.83□□□□□ -1.32
HDAC9-205ENST00000411993 PRAMEF9Q5VWM5 478 aa6.83□□□□□ -1.32
HDAC9-205ENST00000411993 CFHR4Q92496 578 aa6.83□□□□□ -1.32
HDAC9-205ENST00000411993 APPBP2Q92624 585 aa6.83□□□□□ -1.32
HDAC9-205ENST00000411993 MAML3Q96JK9 1138 aa6.83□□□□□ -1.32
HDAC9-205ENST00000411993 RNPC3Q96LT9 517 aaKnown RBP6.83□□□□□ -1.32
HDAC9-205ENST00000411993 TUBGCP5Q96RT8 1024 aa6.83□□□□□ -1.32
HDAC9-205ENST00000411993 MSL2Q9HCI7 577 aa6.83□□□□□ -1.32
HDAC9-205ENST00000411993 SAE1Q9UBE0 346 aaPredicted RBP6.83□□□□□ -1.32
HDAC9-205ENST00000411993 ZKSCAN5Q9Y2L8 839 aa6.83□□□□□ -1.32
HDAC9-205ENST00000411993 CD2APQ9Y5K6 639 aa6.83□□□□□ -1.32
HDAC9-205ENST00000411993 SLC30A1Q9Y6M5 507 aa6.83□□□□□ -1.32
HDAC9-205ENST00000411993 NEK4P51957 841 aa6.82□□□□□ -1.32
HDAC9-205ENST00000411993 ADAM15Q13444 863 aa6.82□□□□□ -1.32
HDAC9-205ENST00000411993 C21orf62-AS1Q17RA5 79 aa6.82□□□□□ -1.32
HDAC9-205ENST00000411993 KLHDC10Q6PID8 442 aa6.82□□□□□ -1.32
HDAC9-205ENST00000411993 NME9Q86XW9 330 aa6.82□□□□□ -1.32
HDAC9-205ENST00000411993 OR5AN1Q8NGI8 311 aa6.82□□□□□ -1.32
HDAC9-205ENST00000411993 INTS7Q9NVH2 962 aaKnown RBP6.82□□□□□ -1.32
HDAC9-205ENST00000411993 MAGEL2Q9UJ55 1249 aa6.82□□□□□ -1.32
HDAC9-205ENST00000411993 VWA7Q9Y334 891 aa6.82□□□□□ -1.32
HDAC9-205ENST00000411993 TESMINQ9Y4I5 508 aa6.82□□□□□ -1.32
HDAC9-205ENST00000411993 KPNA6O60684 536 aa6.81□□□□□ -1.32
HDAC9-205ENST00000411993 C6P13671 934 aa6.81□□□□□ -1.32
HDAC9-205ENST00000411993 SLC9A1P19634 815 aa6.81□□□□□ -1.32
HDAC9-205ENST00000411993 ACO1P21399 889 aaKnown RBP6.81□□□□□ -1.32
HDAC9-205ENST00000411993 SESN2P58004 480 aaPredicted RBP6.81□□□□□ -1.32
HDAC9-205ENST00000411993 EPHA7Q15375 998 aa6.81□□□□□ -1.32
HDAC9-205ENST00000411993 DGKDQ16760 1214 aa6.81□□□□□ -1.32
HDAC9-205ENST00000411993 RPGRQ92834 1020 aaKnown RBP6.81□□□□□ -1.32
HDAC9-205ENST00000411993 FAM89AQ96GI7 184 aa6.81□□□□□ -1.32
HDAC9-205ENST00000411993 VPS11Q9H270 941 aa6.81□□□□□ -1.32
HDAC9-205ENST00000411993 TOMM22Q9NS69 142 aa6.81□□□□□ -1.32
HDAC9-205ENST00000411993 FANCLQ9NW38 375 aa6.81□□□□□ -1.32
HDAC9-205ENST00000411993 SLC26A4O43511 780 aa6.8□□□□□ -1.32
HDAC9-205ENST00000411993 GAS7O60861 476 aa6.8□□□□□ -1.32
HDAC9-205ENST00000411993 H2AFYO75367 372 aaKnown RBP6.8□□□□□ -1.32
HDAC9-205ENST00000411993 TACR2P21452 398 aa6.8□□□□□ -1.32
HDAC9-205ENST00000411993 PTX3P26022 381 aaPredicted RBP6.8□□□□□ -1.32
HDAC9-205ENST00000411993 MSX2P35548 267 aaPredicted RBP6.8□□□□□ -1.32
HDAC9-205ENST00000411993 HGFACQ04756 655 aa6.8□□□□□ -1.32
HDAC9-205ENST00000411993 DUSP8Q13202 625 aa6.8□□□□□ -1.32
HDAC9-205ENST00000411993 CNNM4Q6P4Q7 775 aa6.8□□□□□ -1.32
HDAC9-205ENST00000411993 C16orf86Q6ZW13 317 aa6.8□□□□□ -1.32
HDAC9-205ENST00000411993 C7orf31Q8N865 590 aa6.8□□□□□ -1.32
HDAC9-205ENST00000411993 SHCBP1Q8NEM2 672 aa6.8□□□□□ -1.32
HDAC9-205ENST00000411993 EDAQ92838 391 aa6.8□□□□□ -1.32
HDAC9-205ENST00000411993 GFM2Q969S9 779 aaKnown RBP6.8□□□□□ -1.32
HDAC9-205ENST00000411993 C16orf92Q96LL3 132 aa6.8□□□□□ -1.32
HDAC9-205ENST00000411993 ELF4Q99607 663 aaPredicted RBP6.8□□□□□ -1.32
HDAC9-205ENST00000411993 NELFAQ9H3P2 528 aa6.8□□□□□ -1.32
HDAC9-205ENST00000411993 DENND2AQ9ULE3 1009 aa6.8□□□□□ -1.32
HDAC9-205ENST00000411993 CDC45O75419 566 aa6.79□□□□□ -1.32
HDAC9-205ENST00000411993 ADCY1Q08828 1119 aa6.79□□□□□ -1.32
HDAC9-205ENST00000411993 BCL6BQ8N143 479 aaPredicted RBP6.79□□□□□ -1.32
HDAC9-205ENST00000411993 GCDHQ92947 438 aaPredicted RBP6.79□□□□□ -1.32
HDAC9-205ENST00000411993 LPPQ93052 612 aa6.79□□□□□ -1.32
HDAC9-205ENST00000411993 IFT57Q9NWB7 429 aa6.79□□□□□ -1.32
HDAC9-205ENST00000411993 OXSMQ9NWU1 459 aa6.79□□□□□ -1.32
HDAC9-205ENST00000411993 KCMF1Q9P0J7 381 aa6.79□□□□□ -1.32
HDAC9-205ENST00000411993 SRRDQ9UH36 339 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms