RNA–Protein interactions for RNA: ENST00000411938.1

LSM8-202, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

TSL 3

Gene LSM8, Length 290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-202ENST00000411938 ZKSCAN3Q9BRR0 538 aa7.96□□□□□ -1.14
LSM8-202ENST00000411938 LNPKQ9C0E8 428 aa7.96□□□□□ -1.14
LSM8-202ENST00000411938 C1orf112Q9NSG2 853 aa7.96□□□□□ -1.14
LSM8-202ENST00000411938 ERAP1Q9NZ08 941 aa7.96□□□□□ -1.14
LSM8-202ENST00000411938 RTEL1Q9NZ71 1219 aa7.96□□□□□ -1.14
LSM8-202ENST00000411938 IGSF9Q9P2J2 1179 aa7.96□□□□□ -1.14
LSM8-202ENST00000411938 GINS2Q9Y248 185 aa7.96□□□□□ -1.14
LSM8-202ENST00000411938 FANCMQ8IYD8 2048 aa7.96□□□□□ -1.14
LSM8-202ENST00000411938 MYH6P13533 1939 aa7.95□□□□□ -1.14
LSM8-202ENST00000411938 POTEMA6NI47 508 aa7.95□□□□□ -1.14
LSM8-202ENST00000411938 RRN3P2A6NIE6 340 aa7.95□□□□□ -1.14
LSM8-202ENST00000411938 C9IYK1 514 aa7.95□□□□□ -1.14
LSM8-202ENST00000411938 SPTLC1O15269 473 aa7.95□□□□□ -1.14
LSM8-202ENST00000411938 MGEA5O60502 916 aa7.95□□□□□ -1.14
LSM8-202ENST00000411938 PARP1P09874 1014 aaKnown RBP7.95□□□□□ -1.14
LSM8-202ENST00000411938 INSRRP14616 1297 aa7.95□□□□□ -1.14
LSM8-202ENST00000411938 HAND2P61296 217 aa7.95□□□□□ -1.14
LSM8-202ENST00000411938 MRPS9P82933 396 aaKnown RBP7.95□□□□□ -1.14
LSM8-202ENST00000411938 ALX1Q15699 326 aa7.95□□□□□ -1.14
LSM8-202ENST00000411938 POTEGQ6S5H5 508 aa7.95□□□□□ -1.14
LSM8-202ENST00000411938 MFSD6Q6ZSS7 791 aa7.95□□□□□ -1.14
LSM8-202ENST00000411938 DGKHQ86XP1 1220 aa7.95□□□□□ -1.14
LSM8-202ENST00000411938 ABI1Q8IZP0 508 aa7.95□□□□□ -1.14
LSM8-202ENST00000411938 SAMD3Q8N6K7 520 aa7.95□□□□□ -1.14
LSM8-202ENST00000411938 FEZF2Q8TBJ5 459 aa7.95□□□□□ -1.14
LSM8-202ENST00000411938 RSAD2Q8WXG1 361 aa7.95□□□□□ -1.14
LSM8-202ENST00000411938 SNX21Q969T3 373 aa7.95□□□□□ -1.14
LSM8-202ENST00000411938 TMEM117Q9H0C3 514 aa7.95□□□□□ -1.14
LSM8-202ENST00000411938 KAT14Q9H8E8 782 aa7.95□□□□□ -1.14
LSM8-202ENST00000411938 RGS18Q9NS28 235 aa7.95□□□□□ -1.14
LSM8-202ENST00000411938 CHMP5Q9NZZ3 219 aa7.95□□□□□ -1.14
LSM8-202ENST00000411938 DLGAP2Q9P1A6 1054 aa7.95□□□□□ -1.14
LSM8-202ENST00000411938 FNDC1Q4ZHG4 1894 aaPredicted RBP7.95□□□□□ -1.14
LSM8-202ENST00000411938 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.94□□□□□ -1.14
LSM8-202ENST00000411938 LAMTOR5O43504 91 aa7.94□□□□□ -1.14
LSM8-202ENST00000411938 EIF5BO60841 1220 aaKnown RBP7.94□□□□□ -1.14
LSM8-202ENST00000411938 PPP1R11O60927 126 aaPredicted RBP7.94□□□□□ -1.14
LSM8-202ENST00000411938 RPS6KA5O75582 802 aa7.94□□□□□ -1.14
LSM8-202ENST00000411938 STAM2O75886 525 aa7.94□□□□□ -1.14
LSM8-202ENST00000411938 FGAP02671 866 aa7.94□□□□□ -1.14
LSM8-202ENST00000411938 L1TD1Q5T7N2 865 aaKnown RBP7.94□□□□□ -1.14
LSM8-202ENST00000411938 PHLDB3Q6NSJ2 640 aa7.94□□□□□ -1.14
LSM8-202ENST00000411938 LRRC55Q6ZSA7 311 aa7.94□□□□□ -1.14
LSM8-202ENST00000411938 GPR149Q86SP6 731 aa7.94□□□□□ -1.14
LSM8-202ENST00000411938 LRRC43Q8N309 656 aa7.94□□□□□ -1.14
LSM8-202ENST00000411938 SLC44A3Q8N4M1 653 aa7.94□□□□□ -1.14
LSM8-202ENST00000411938 GIMAP8Q8ND71 665 aaPredicted RBP7.94□□□□□ -1.14
LSM8-202ENST00000411938 GPR152Q8TDT2 470 aa7.94□□□□□ -1.14
LSM8-202ENST00000411938 TRAPPC12Q8WVT3 735 aa7.94□□□□□ -1.14
LSM8-202ENST00000411938 AUTS2Q8WXX7 1259 aa7.94□□□□□ -1.14
LSM8-202ENST00000411938 SEPT1Q8WYJ6 367 aa7.94□□□□□ -1.14
LSM8-202ENST00000411938 ESR2Q92731 530 aa7.94□□□□□ -1.14
LSM8-202ENST00000411938 SENP7Q9BQF6 1050 aa7.94□□□□□ -1.14
LSM8-202ENST00000411938 SMARCAD1Q9H4L7 1026 aa7.94□□□□□ -1.14
LSM8-202ENST00000411938 SFXN1Q9H9B4 322 aa7.94□□□□□ -1.14
LSM8-202ENST00000411938 SPATA6Q9NWH7 488 aaPredicted RBP7.94□□□□□ -1.14
LSM8-202ENST00000411938 TMEM161AQ9NX61 479 aa7.94□□□□□ -1.14
LSM8-202ENST00000411938 ANGPTL2Q9UKU9 493 aa7.94□□□□□ -1.14
LSM8-202ENST00000411938 BRPF3Q9ULD4 1205 aa7.94□□□□□ -1.14
LSM8-202ENST00000411938 SMG5Q9UPR3 1016 aaKnown RBP7.94□□□□□ -1.14
LSM8-202ENST00000411938 NOC2LQ9Y3T9 749 aaKnown RBP7.94□□□□□ -1.14
LSM8-202ENST00000411938 PCDHA2Q9Y5H9 948 aa7.94□□□□□ -1.14
LSM8-202ENST00000411938 DOCK5Q9H7D0 1870 aa7.94□□□□□ -1.14
LSM8-202ENST00000411938 GSTTP1A0A1W2PQM5 241 aa7.93□□□□□ -1.14
LSM8-202ENST00000411938 DDX11L8A8MPP1 907 aa7.93□□□□□ -1.14
LSM8-202ENST00000411938 ZBTB5O15062 677 aa7.93□□□□□ -1.14
LSM8-202ENST00000411938 HOXA2O43364 376 aa7.93□□□□□ -1.14
LSM8-202ENST00000411938 CDC45O75419 566 aa7.93□□□□□ -1.14
LSM8-202ENST00000411938 SRFP11831 508 aa7.93□□□□□ -1.14
LSM8-202ENST00000411938 GBP2P32456 591 aaPredicted RBP7.93□□□□□ -1.14
LSM8-202ENST00000411938 CSTF1Q05048 431 aaKnown RBP7.93□□□□□ -1.14
LSM8-202ENST00000411938 LETM2Q2VYF4 491 aa7.93□□□□□ -1.14
LSM8-202ENST00000411938 ZNF528Q3MIS6 628 aa7.93□□□□□ -1.14
LSM8-202ENST00000411938 CCDC178Q5BJE1 867 aa7.93□□□□□ -1.14
LSM8-202ENST00000411938 ODR4Q5SWX8 454 aa7.93□□□□□ -1.14
LSM8-202ENST00000411938 DCLRE1AQ6PJP8 1040 aa7.93□□□□□ -1.14
LSM8-202ENST00000411938 FAM43BQ6ZT52 329 aaPredicted RBP7.93□□□□□ -1.14
LSM8-202ENST00000411938 NLRX1Q86UT6 975 aa7.93□□□□□ -1.14
LSM8-202ENST00000411938 IQCA1Q86XH1 822 aa7.93□□□□□ -1.14
LSM8-202ENST00000411938 HOMER1Q86YM7 354 aa7.93□□□□□ -1.14
LSM8-202ENST00000411938 MAML2Q8IZL2 1156 aaPredicted RBP7.93□□□□□ -1.14
LSM8-202ENST00000411938 VPS52Q8N1B4 723 aa7.93□□□□□ -1.14
LSM8-202ENST00000411938 SLC39A11Q8N1S5 342 aa7.93□□□□□ -1.14
LSM8-202ENST00000411938 NME8Q8N427 588 aa7.93□□□□□ -1.14
LSM8-202ENST00000411938 RNF169Q8NCN4 708 aa7.93□□□□□ -1.14
LSM8-202ENST00000411938 SLC22A17Q8WUG5 538 aa7.93□□□□□ -1.14
LSM8-202ENST00000411938 BORCS6Q96GS4 357 aa7.93□□□□□ -1.14
LSM8-202ENST00000411938 TMEM169Q96HH4 297 aa7.93□□□□□ -1.14
LSM8-202ENST00000411938 CASD1Q96PB1 797 aa7.93□□□□□ -1.14
LSM8-202ENST00000411938 FOXQ1Q9C009 403 aa7.93□□□□□ -1.14
LSM8-202ENST00000411938 ARHGEF3Q9NR81 526 aa7.93□□□□□ -1.14
LSM8-202ENST00000411938 GMEB2Q9UKD1 530 aa7.93□□□□□ -1.14
LSM8-202ENST00000411938 CIZ1Q9ULV3 898 aaPredicted RBP7.93□□□□□ -1.14
LSM8-202ENST00000411938 ST3GAL5Q9UNP4 418 aa7.93□□□□□ -1.14
LSM8-202ENST00000411938 PCDHGA2Q9Y5H1 932 aa7.93□□□□□ -1.14
LSM8-202ENST00000411938 KDM3AQ9Y4C1 1321 aa7.93□□□□□ -1.14
LSM8-202ENST00000411938 LOXHD1Q8IVV2 1947 aa7.93□□□□□ -1.14
LSM8-202ENST00000411938 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.92□□□□□ -1.14
LSM8-202ENST00000411938 NT5C1B-RDH14C9J2C7 533 aa7.92□□□□□ -1.14
LSM8-202ENST00000411938 KLRF2D3W0D1 207 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms