RNA–Protein interactions for RNA: ENST00000411934.6

RPE-204, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 1 (best) BASIC

Gene RPE, Length 792 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-204ENST00000411934 CCL23P55773 120 aa9.17□□□□□ -0.94
RPE-204ENST00000411934 NUCB2P80303 420 aa9.17□□□□□ -0.94
RPE-204ENST00000411934 CYP4A11Q02928 519 aa9.17□□□□□ -0.94
RPE-204ENST00000411934 POU5F1BQ06416 359 aa9.17□□□□□ -0.94
RPE-204ENST00000411934 CTTNQ14247 550 aaKnown RBP9.17□□□□□ -0.94
RPE-204ENST00000411934 SLC39A14Q15043 492 aa9.17□□□□□ -0.94
RPE-204ENST00000411934 PTPAQ15257 358 aa9.17□□□□□ -0.94
RPE-204ENST00000411934 MTERF2Q49AM1 385 aa9.17□□□□□ -0.94
RPE-204ENST00000411934 PLEKHG4Q58EX7 1191 aa9.17□□□□□ -0.94
RPE-204ENST00000411934 TMEM240Q5SV17 173 aa9.17□□□□□ -0.94
RPE-204ENST00000411934 GPR153Q6NV75 609 aa9.17□□□□□ -0.94
RPE-204ENST00000411934 EFCAB12Q6NXP0 572 aa9.17□□□□□ -0.94
RPE-204ENST00000411934 RUFY4Q6ZNE9 571 aa9.17□□□□□ -0.94
RPE-204ENST00000411934 TSHZ1Q6ZSZ6 1077 aa9.17□□□□□ -0.94
RPE-204ENST00000411934 CATSPER3Q86XQ3 398 aa9.17□□□□□ -0.94
RPE-204ENST00000411934 TPH2Q8IWU9 490 aa9.17□□□□□ -0.94
RPE-204ENST00000411934 KIAA0319LQ8IZA0 1049 aa9.17□□□□□ -0.94
RPE-204ENST00000411934 MCPH1Q8NEM0 835 aa9.17□□□□□ -0.94
RPE-204ENST00000411934 PHOSPHO2Q8TCD6 241 aa9.17□□□□□ -0.94
RPE-204ENST00000411934 SNX29Q8TEQ0 813 aa9.17□□□□□ -0.94
RPE-204ENST00000411934 TRAPPC12Q8WVT3 735 aa9.17□□□□□ -0.94
RPE-204ENST00000411934 DNAJB3Q8WWF6 145 aa9.17□□□□□ -0.94
RPE-204ENST00000411934 SCLYQ96I15 445 aa9.17□□□□□ -0.94
RPE-204ENST00000411934 CEP170P1Q96L14 293 aa9.17□□□□□ -0.94
RPE-204ENST00000411934 SLC9A7Q96T83 725 aa9.17□□□□□ -0.94
RPE-204ENST00000411934 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.17□□□□□ -0.94
RPE-204ENST00000411934 TIPINQ9BVW5 301 aa9.17□□□□□ -0.94
RPE-204ENST00000411934 FTHL17Q9BXU8 183 aa9.17□□□□□ -0.94
RPE-204ENST00000411934 ATP6V0A4Q9HBG4 840 aa9.17□□□□□ -0.94
RPE-204ENST00000411934 RGL1Q9NZL6 768 aa9.17□□□□□ -0.94
RPE-204ENST00000411934 KCND2Q9NZV8 630 aa9.17□□□□□ -0.94
RPE-204ENST00000411934 WRAP73Q9P2S5 460 aaPredicted RBP9.17□□□□□ -0.94
RPE-204ENST00000411934 CFAP45Q9UL16 551 aa9.17□□□□□ -0.94
RPE-204ENST00000411934 COLQQ9Y215 455 aaPredicted RBP9.17□□□□□ -0.94
RPE-204ENST00000411934 SRPRBQ9Y5M8 271 aaKnown RBP9.17□□□□□ -0.94
RPE-204ENST00000411934 CDY2AQ9Y6F7 541 aa9.17□□□□□ -0.94
RPE-204ENST00000411934 TMEM265A0A087WTH1 108 aa9.16□□□□□ -0.94
RPE-204ENST00000411934 VWA3AA6NCI4 1184 aa9.16□□□□□ -0.94
RPE-204ENST00000411934 ASAP2O43150 1006 aa9.16□□□□□ -0.94
RPE-204ENST00000411934 NBNO60934 754 aa9.16□□□□□ -0.94
RPE-204ENST00000411934 MED24O75448 989 aa9.16□□□□□ -0.94
RPE-204ENST00000411934 CHRNA1P02708 482 aa9.16□□□□□ -0.94
RPE-204ENST00000411934 TXLNAP40222 546 aa9.16□□□□□ -0.94
RPE-204ENST00000411934 CCT6AP40227 531 aaKnown RBP9.16□□□□□ -0.94
RPE-204ENST00000411934 CRYBB1P53674 252 aaPredicted RBP9.16□□□□□ -0.94
RPE-204ENST00000411934 MKRN4PQ13434 485 aaPredicted RBP9.16□□□□□ -0.94
RPE-204ENST00000411934 MXD4Q14582 209 aaPredicted RBP9.16□□□□□ -0.94
RPE-204ENST00000411934 MBTPS1Q14703 1052 aa9.16□□□□□ -0.94
RPE-204ENST00000411934 EMC2Q15006 297 aa9.16□□□□□ -0.94
RPE-204ENST00000411934 XKR9Q5GH70 373 aa9.16□□□□□ -0.94
RPE-204ENST00000411934 FBXO47Q5MNV8 452 aa9.16□□□□□ -0.94
RPE-204ENST00000411934 LINC00301Q8NCQ3 95 aa9.16□□□□□ -0.94
RPE-204ENST00000411934 KCNG4Q8TDN1 519 aa9.16□□□□□ -0.94
RPE-204ENST00000411934 PPP1R13LQ8WUF5 828 aa9.16□□□□□ -0.94
RPE-204ENST00000411934 SEPT8Q92599 483 aa9.16□□□□□ -0.94
RPE-204ENST00000411934 VWCEQ96DN2 955 aa9.16□□□□□ -0.94
RPE-204ENST00000411934 CALML4Q96GE6 196 aa9.16□□□□□ -0.94
RPE-204ENST00000411934 RNPC3Q96LT9 517 aaKnown RBP9.16□□□□□ -0.94
RPE-204ENST00000411934 USP28Q96RU2 1077 aa9.16□□□□□ -0.94
RPE-204ENST00000411934 MTRQ99707 1265 aa9.16□□□□□ -0.94
RPE-204ENST00000411934 NFKBIZQ9BYH8 718 aa9.16□□□□□ -0.94
RPE-204ENST00000411934 CELF4Q9BZC1 486 aaKnown RBP9.16□□□□□ -0.94
RPE-204ENST00000411934 INO80BQ9C086 356 aaPredicted RBP9.16□□□□□ -0.94
RPE-204ENST00000411934 CCSER1Q9C0I3 900 aa9.16□□□□□ -0.94
RPE-204ENST00000411934 CIZ1Q9ULV3 898 aaPredicted RBP9.16□□□□□ -0.94
RPE-204ENST00000411934 SCN5AQ14524 2016 aa9.15□□□□□ -0.94
RPE-204ENST00000411934 MICAL3Q7RTP6 2002 aa9.15□□□□□ -0.94
RPE-204ENST00000411934 EVPLQ92817 2033 aa9.15□□□□□ -0.94
RPE-204ENST00000411934 PHLPP2Q6ZVD8 1323 aa9.15□□□□□ -0.94
RPE-204ENST00000411934 GPR32O75388 356 aa9.15□□□□□ -0.94
RPE-204ENST00000411934 EYA4O95677 639 aa9.15□□□□□ -0.94
RPE-204ENST00000411934 CTSHP09668 335 aa9.15□□□□□ -0.94
RPE-204ENST00000411934 DDIT3P35638 169 aa9.15□□□□□ -0.94
RPE-204ENST00000411934 UBA7P41226 1012 aa9.15□□□□□ -0.94
RPE-204ENST00000411934 GPC3P51654 580 aa9.15□□□□□ -0.94
RPE-204ENST00000411934 CLCN3P51790 818 aa9.15□□□□□ -0.94
RPE-204ENST00000411934 SMAD3P84022 425 aaKnown RBP9.15□□□□□ -0.94
RPE-204ENST00000411934 IKBKEQ14164 716 aa9.15□□□□□ -0.94
RPE-204ENST00000411934 GPNMBQ14956 572 aa9.15□□□□□ -0.94
RPE-204ENST00000411934 IL17AQ16552 155 aa9.15□□□□□ -0.94
RPE-204ENST00000411934 TMEM119Q4V9L6 283 aa9.15□□□□□ -0.94
RPE-204ENST00000411934 PLA2G4FQ68DD2 849 aa9.15□□□□□ -0.94
RPE-204ENST00000411934 ZNF365Q70YC5 407 aa9.15□□□□□ -0.94
RPE-204ENST00000411934 C16orf59Q7L2K0 433 aa9.15□□□□□ -0.94
RPE-204ENST00000411934 IFNLR1Q8IU57 520 aaPredicted RBP9.15□□□□□ -0.94
RPE-204ENST00000411934 METTL13Q8N6R0 699 aa9.15□□□□□ -0.94
RPE-204ENST00000411934 KRI1Q8N9T8 703 aaKnown RBP9.15□□□□□ -0.94
RPE-204ENST00000411934 PSPC1Q8WXF1 523 aaKnown RBP9.15□□□□□ -0.94
RPE-204ENST00000411934 RSPH1Q8WYR4 309 aa9.15□□□□□ -0.94
RPE-204ENST00000411934 CDK5RAP3Q96JB5 506 aa9.15□□□□□ -0.94
RPE-204ENST00000411934 MMTAG2Q9BU76 263 aaKnown RBP9.15□□□□□ -0.94
RPE-204ENST00000411934 IFIH1Q9BYX4 1025 aaKnown RBP9.15□□□□□ -0.94
RPE-204ENST00000411934 FAM49AQ9H0Q0 323 aaPredicted RBP9.15□□□□□ -0.94
RPE-204ENST00000411934 STK17AQ9UEE5 414 aa9.15□□□□□ -0.94
RPE-204ENST00000411934 FBXO2Q9UK22 296 aaPredicted RBP9.15□□□□□ -0.94
RPE-204ENST00000411934 DNM3Q9UQ16 869 aa9.15□□□□□ -0.94
RPE-204ENST00000411934 AKT3Q9Y243 479 aa9.15□□□□□ -0.94
RPE-204ENST00000411934 CLIC4Q9Y696 253 aa9.15□□□□□ -0.94
RPE-204ENST00000411934 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.14□□□□□ -0.95
RPE-204ENST00000411934 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms