RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 TMEM62Q0P6H9 643 aa12.18□□□□□ -0.46
CHMP3-205ENST00000409810 RESTQ13127 1097 aa12.18□□□□□ -0.46
CHMP3-205ENST00000409810 GPNMBQ14956 572 aa12.18□□□□□ -0.46
CHMP3-205ENST00000409810 FBXO47Q5MNV8 452 aa12.18□□□□□ -0.46
CHMP3-205ENST00000409810 PLA2G4FQ68DD2 849 aa12.18□□□□□ -0.46
CHMP3-205ENST00000409810 GPR153Q6NV75 609 aa12.18□□□□□ -0.46
CHMP3-205ENST00000409810 LRRC71Q8N4P6 559 aa12.18□□□□□ -0.46
CHMP3-205ENST00000409810 LINC01465Q8N7H1 131 aa12.18□□□□□ -0.46
CHMP3-205ENST00000409810 IGSF22Q8N9C0 903 aa12.18□□□□□ -0.46
CHMP3-205ENST00000409810 PHOSPHO2Q8TCD6 241 aa12.18□□□□□ -0.46
CHMP3-205ENST00000409810 VWCEQ96DN2 955 aa12.18□□□□□ -0.46
CHMP3-205ENST00000409810 SCLT1Q96NL6 688 aa12.18□□□□□ -0.46
CHMP3-205ENST00000409810 NACC1Q96RE7 527 aa12.18□□□□□ -0.46
CHMP3-205ENST00000409810 ANKEF1Q9NU02 776 aa12.18□□□□□ -0.46
CHMP3-205ENST00000409810 WRAP73Q9P2S5 460 aaPredicted RBP12.18□□□□□ -0.46
CHMP3-205ENST00000409810 LRWD1Q9UFC0 647 aa12.18□□□□□ -0.46
CHMP3-205ENST00000409810 GINS2Q9Y248 185 aa12.18□□□□□ -0.46
CHMP3-205ENST00000409810 TMEM150BA6NC51 233 aa12.17□□□□□ -0.46
CHMP3-205ENST00000409810 VTNP04004 478 aa12.17□□□□□ -0.46
CHMP3-205ENST00000409810 ATP2A2P16615 1042 aaKnown RBP12.17□□□□□ -0.46
CHMP3-205ENST00000409810 CCT6AP40227 531 aaKnown RBP12.17□□□□□ -0.46
CHMP3-205ENST00000409810 CRYBB1P53674 252 aaPredicted RBP12.17□□□□□ -0.46
CHMP3-205ENST00000409810 NPEPPSP55786 919 aa12.17□□□□□ -0.46
CHMP3-205ENST00000409810 PAK2Q13177 524 aa12.17□□□□□ -0.46
CHMP3-205ENST00000409810 RAB30Q15771 203 aa12.17□□□□□ -0.46
CHMP3-205ENST00000409810 KRT79Q5XKE5 535 aa12.17□□□□□ -0.46
CHMP3-205ENST00000409810 CATSPER3Q86XQ3 398 aa12.17□□□□□ -0.46
CHMP3-205ENST00000409810 DBF4BQ8NFT6 615 aa12.17□□□□□ -0.46
CHMP3-205ENST00000409810 SNX29Q8TEQ0 813 aa12.17□□□□□ -0.46
CHMP3-205ENST00000409810 TCP11Q8WWU5 503 aa12.17□□□□□ -0.46
CHMP3-205ENST00000409810 MTRQ99707 1265 aa12.17□□□□□ -0.46
CHMP3-205ENST00000409810 FTHL17Q9BXU8 183 aa12.17□□□□□ -0.46
CHMP3-205ENST00000409810 CXXC1Q9P0U4 656 aaPredicted RBP12.17□□□□□ -0.46
CHMP3-205ENST00000409810 MYH11P35749 1972 aa12.16□□□□□ -0.46
CHMP3-205ENST00000409810 IGKV6-21A0A0C4DH24 114 aa12.16□□□□□ -0.46
CHMP3-205ENST00000409810 VWA3AA6NCI4 1184 aa12.16□□□□□ -0.46
CHMP3-205ENST00000409810 MED24O75448 989 aa12.16□□□□□ -0.46
CHMP3-205ENST00000409810 RPS6KA5O75582 802 aa12.16□□□□□ -0.46
CHMP3-205ENST00000409810 DGAT1O75907 488 aa12.16□□□□□ -0.46
CHMP3-205ENST00000409810 AMHP03971 560 aa12.16□□□□□ -0.46
CHMP3-205ENST00000409810 SPATA31C1P0DKV0 1188 aa12.16□□□□□ -0.46
CHMP3-205ENST00000409810 NLRP11P59045 1033 aaKnown RBP12.16□□□□□ -0.46
CHMP3-205ENST00000409810 WDR5P61964 334 aaKnown RBP12.16□□□□□ -0.46
CHMP3-205ENST00000409810 LPIN1Q14693 890 aa12.16□□□□□ -0.46
CHMP3-205ENST00000409810 EMC2Q15006 297 aa12.16□□□□□ -0.46
CHMP3-205ENST00000409810 SF3A1Q15459 793 aaKnown RBP12.16□□□□□ -0.46
CHMP3-205ENST00000409810 KIZQ2M2Z5 673 aa12.16□□□□□ -0.46
CHMP3-205ENST00000409810 ZNF410Q86VK4 478 aa12.16□□□□□ -0.46
CHMP3-205ENST00000409810 NLRP7Q8WX94 980 aa12.16□□□□□ -0.46
CHMP3-205ENST00000409810 PSPC1Q8WXF1 523 aaKnown RBP12.16□□□□□ -0.46
CHMP3-205ENST00000409810 AK8Q96MA6 479 aa12.16□□□□□ -0.46
CHMP3-205ENST00000409810 CEP89Q96ST8 783 aa12.16□□□□□ -0.46
CHMP3-205ENST00000409810 PPP1R16BQ96T49 567 aa12.16□□□□□ -0.46
CHMP3-205ENST00000409810 OSMRQ99650 979 aa12.16□□□□□ -0.46
CHMP3-205ENST00000409810 SH2D3AQ9BRG2 576 aa12.16□□□□□ -0.46
CHMP3-205ENST00000409810 DHX33Q9H6R0 707 aaKnown RBP12.16□□□□□ -0.46
CHMP3-205ENST00000409810 ATP6V0A4Q9HBG4 840 aa12.16□□□□□ -0.46
CHMP3-205ENST00000409810 SUCLA2Q9P2R7 463 aaPredicted RBP12.16□□□□□ -0.46
CHMP3-205ENST00000409810 MSRAQ9UJ68 235 aa12.16□□□□□ -0.46
CHMP3-205ENST00000409810 DBR1Q9UK59 544 aaKnown RBP12.16□□□□□ -0.46
CHMP3-205ENST00000409810 TTC3P53804 2025 aa12.16□□□□□ -0.46
CHMP3-205ENST00000409810 TMEM265A0A087WTH1 108 aa12.15□□□□□ -0.46
CHMP3-205ENST00000409810 ARHGEF35A5YM69 484 aa12.15□□□□□ -0.46
CHMP3-205ENST00000409810 SOX1O00570 391 aaPredicted RBP12.15□□□□□ -0.46
CHMP3-205ENST00000409810 GPR182O15218 404 aa12.15□□□□□ -0.46
CHMP3-205ENST00000409810 SLC26A4O43511 780 aa12.15□□□□□ -0.46
CHMP3-205ENST00000409810 GPR32O75388 356 aa12.15□□□□□ -0.46
CHMP3-205ENST00000409810 RARRES1P49788 294 aa12.15□□□□□ -0.46
CHMP3-205ENST00000409810 GPC3P51654 580 aa12.15□□□□□ -0.46
CHMP3-205ENST00000409810 ZNF697Q5TEC3 545 aa12.15□□□□□ -0.46
CHMP3-205ENST00000409810 POTEGQ6S5H5 508 aa12.15□□□□□ -0.46
CHMP3-205ENST00000409810 KCTD17Q8N5Z5 321 aa12.15□□□□□ -0.46
CHMP3-205ENST00000409810 SPRYD3Q8NCJ5 442 aa12.15□□□□□ -0.46
CHMP3-205ENST00000409810 PIGOQ8TEQ8 1089 aa12.15□□□□□ -0.46
CHMP3-205ENST00000409810 LRCH3Q96II8 777 aa12.15□□□□□ -0.46
CHMP3-205ENST00000409810 CDK5RAP3Q96JB5 506 aa12.15□□□□□ -0.46
CHMP3-205ENST00000409810 ZNF396Q96N95 335 aaPredicted RBP12.15□□□□□ -0.46
CHMP3-205ENST00000409810 GCOM2Q9BZD3 368 aaPredicted RBP12.15□□□□□ -0.46
CHMP3-205ENST00000409810 INO80BQ9C086 356 aaPredicted RBP12.15□□□□□ -0.46
CHMP3-205ENST00000409810 NT5C3AQ9H0P0 336 aa12.15□□□□□ -0.46
CHMP3-205ENST00000409810 ASAP2O43150 1006 aa12.14□□□□□ -0.47
CHMP3-205ENST00000409810 USO1O60763 962 aaKnown RBP12.14□□□□□ -0.47
CHMP3-205ENST00000409810 F13A1P00488 732 aa12.14□□□□□ -0.47
CHMP3-205ENST00000409810 ZSCAN22P10073 491 aaPredicted RBP12.14□□□□□ -0.47
CHMP3-205ENST00000409810 DNAJB2P25686 324 aa12.14□□□□□ -0.47
CHMP3-205ENST00000409810 CD52P31358 61 aa12.14□□□□□ -0.47
CHMP3-205ENST00000409810 LONP1P36776 959 aaKnown RBP12.14□□□□□ -0.47
CHMP3-205ENST00000409810 NFX1Q12986 1120 aaKnown RBP12.14□□□□□ -0.47
CHMP3-205ENST00000409810 MXD4Q14582 209 aaPredicted RBP12.14□□□□□ -0.47
CHMP3-205ENST00000409810 IL17AQ16552 155 aa12.14□□□□□ -0.47
CHMP3-205ENST00000409810 RHPN2Q8IUC4 686 aa12.14□□□□□ -0.47
CHMP3-205ENST00000409810 MYOCDQ8IZQ8 938 aa12.14□□□□□ -0.47
CHMP3-205ENST00000409810 MCPH1Q8NEM0 835 aa12.14□□□□□ -0.47
CHMP3-205ENST00000409810 TIFAQ96CG3 184 aa12.14□□□□□ -0.47
CHMP3-205ENST00000409810 ADAMTS10Q9H324 1103 aa12.14□□□□□ -0.47
CHMP3-205ENST00000409810 AGO3Q9H9G7 860 aaKnown RBP12.14□□□□□ -0.47
CHMP3-205ENST00000409810 RNF216Q9NWF9 866 aaPredicted RBP12.14□□□□□ -0.47
CHMP3-205ENST00000409810 PADI3Q9ULW8 664 aa12.14□□□□□ -0.47
CHMP3-205ENST00000409810 KIAA1024Q9UPX6 916 aa12.14□□□□□ -0.47
CHMP3-205ENST00000409810 DNM3Q9UQ16 869 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms