RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 AKT3Q9Y243 479 aa16.64■□□□□ 0.25
CBX3-203ENST00000409747 CYP3A7-CYP3A51PA0A087WV96 503 aa16.63■□□□□ 0.25
CBX3-203ENST00000409747 VTNP04004 478 aa16.63■□□□□ 0.25
CBX3-203ENST00000409747 XBP1P17861 261 aa16.63■□□□□ 0.25
CBX3-203ENST00000409747 CYP3A7P24462 503 aa16.63■□□□□ 0.25
CBX3-203ENST00000409747 EFCAB12Q6NXP0 572 aa16.63■□□□□ 0.25
CBX3-203ENST00000409747 EP400NLQ6ZTU2 488 aa16.63■□□□□ 0.25
CBX3-203ENST00000409747 PPP1R16BQ96T49 567 aa16.63■□□□□ 0.25
CBX3-203ENST00000409747 UNC45AQ9H3U1 944 aa16.63■□□□□ 0.25
CBX3-203ENST00000409747 CDHR5Q9HBB8 845 aa16.63■□□□□ 0.25
CBX3-203ENST00000409747 AAASQ9NRG9 546 aa16.63■□□□□ 0.25
CBX3-203ENST00000409747 CLDND1Q9NY35 253 aa16.63■□□□□ 0.25
CBX3-203ENST00000409747 PLAGL2Q9UPG8 496 aa16.63■□□□□ 0.25
CBX3-203ENST00000409747 ATG2AQ2TAZ0 1938 aa16.63■□□□□ 0.25
CBX3-203ENST00000409747 GRXCR2A6NFK2 248 aa16.62■□□□□ 0.25
CBX3-203ENST00000409747 GPR32O75388 356 aa16.62■□□□□ 0.25
CBX3-203ENST00000409747 CLCN3P51790 818 aa16.62■□□□□ 0.25
CBX3-203ENST00000409747 NONOQ15233 471 aaKnown RBP eCLIP16.62■□□□□ 0.25
CBX3-203ENST00000409747 MIER3Q7Z3K6 550 aa16.62■□□□□ 0.25
CBX3-203ENST00000409747 KRT25Q7Z3Z0 450 aa16.62■□□□□ 0.25
CBX3-203ENST00000409747 FAM228AQ86W67 206 aa16.62■□□□□ 0.25
CBX3-203ENST00000409747 ALG13Q9NP73 1137 aaKnown RBP16.62■□□□□ 0.25
CBX3-203ENST00000409747 H3BQ06 376 aaPredicted RBP16.62■□□□□ 0.25
CBX3-203ENST00000409747 M0R2N6 131 aa16.62■□□□□ 0.25
CBX3-203ENST00000409747 EDIL3O43854 480 aa16.62■□□□□ 0.25
CBX3-203ENST00000409747 ZNF862O60290 1169 aa16.62■□□□□ 0.25
CBX3-203ENST00000409747 MGEA5O60502 916 aa16.62■□□□□ 0.25
CBX3-203ENST00000409747 COL9A1P20849 921 aa16.62■□□□□ 0.25
CBX3-203ENST00000409747 IBSPP21815 317 aaPredicted RBP16.62■□□□□ 0.25
CBX3-203ENST00000409747 TBC1D8BQ0IIM8 1120 aa16.62■□□□□ 0.25
CBX3-203ENST00000409747 FAM178BQ8IXR5 827 aa16.62■□□□□ 0.25
CBX3-203ENST00000409747 SLKQ9H2G2 1235 aaPredicted RBP16.62■□□□□ 0.25
CBX3-203ENST00000409747 ELAC1Q9H777 363 aaKnown RBP16.62■□□□□ 0.25
CBX3-203ENST00000409747 TMEM161AQ9NX61 479 aa16.62■□□□□ 0.25
CBX3-203ENST00000409747 PCDHB12Q9Y5F1 795 aa16.62■□□□□ 0.25
CBX3-203ENST00000409747 STK36Q9NRP7 1315 aa16.61■□□□□ 0.25
CBX3-203ENST00000409747 C9IYK1 514 aa16.61■□□□□ 0.25
CBX3-203ENST00000409747 HOXA2O43364 376 aa16.61■□□□□ 0.25
CBX3-203ENST00000409747 PSMD10O75832 226 aa16.61■□□□□ 0.25
CBX3-203ENST00000409747 TDP2O95551 362 aa16.61■□□□□ 0.25
CBX3-203ENST00000409747 IL9P15248 144 aa16.61■□□□□ 0.25
CBX3-203ENST00000409747 NLRP11P59045 1033 aaKnown RBP16.61■□□□□ 0.25
CBX3-203ENST00000409747 ANAPC15P60006 121 aa16.61■□□□□ 0.25
CBX3-203ENST00000409747 CSPP1Q1MSJ5 1256 aa16.61■□□□□ 0.25
CBX3-203ENST00000409747 SPOUT1Q5T280 376 aaKnown RBP16.61■□□□□ 0.25
CBX3-203ENST00000409747 LINC01465Q8N7H1 131 aa16.61■□□□□ 0.25
CBX3-203ENST00000409747 KLHL23Q8NBE8 558 aa16.61■□□□□ 0.25
CBX3-203ENST00000409747 MBOAT7Q96N66 472 aa16.61■□□□□ 0.25
CBX3-203ENST00000409747 SCLT1Q96NL6 688 aa16.61■□□□□ 0.25
CBX3-203ENST00000409747 LARP6Q9BRS8 491 aaKnown RBP16.61■□□□□ 0.25
CBX3-203ENST00000409747 ATP6V0A4Q9HBG4 840 aa16.61■□□□□ 0.25
CBX3-203ENST00000409747 DDX25Q9UHL0 483 aaKnown RBP16.61■□□□□ 0.25
CBX3-203ENST00000409747 FNDC1Q4ZHG4 1894 aaPredicted RBP16.6■□□□□ 0.25
CBX3-203ENST00000409747 CCDC194A0A1B0GVG4 234 aa16.6■□□□□ 0.25
CBX3-203ENST00000409747 TBKBP1A7MCY6 615 aa16.6■□□□□ 0.25
CBX3-203ENST00000409747 EIF5BO60841 1220 aaKnown RBP16.6■□□□□ 0.25
CBX3-203ENST00000409747 ITGB1P05556 798 aa16.6■□□□□ 0.25
CBX3-203ENST00000409747 ZSCAN20P17040 1043 aaPredicted RBP16.6■□□□□ 0.25
CBX3-203ENST00000409747 EIF4BP23588 611 aaKnown RBP16.6■□□□□ 0.25
CBX3-203ENST00000409747 CDC42EP1Q00587 391 aa16.6■□□□□ 0.25
CBX3-203ENST00000409747 HYAL1Q12794 435 aa16.6■□□□□ 0.25
CBX3-203ENST00000409747 ANKRD1Q15327 319 aa16.6■□□□□ 0.25
CBX3-203ENST00000409747 UGCGQ16739 394 aa16.6■□□□□ 0.25
CBX3-203ENST00000409747 CTC1Q2NKJ3 1217 aa16.6■□□□□ 0.25
CBX3-203ENST00000409747 XKR3Q5GH77 459 aa16.6■□□□□ 0.25
CBX3-203ENST00000409747 GJD3Q8N144 294 aa16.6■□□□□ 0.25
CBX3-203ENST00000409747 LRRC71Q8N4P6 559 aa16.6■□□□□ 0.25
CBX3-203ENST00000409747 ADAMTS10Q9H324 1103 aa16.6■□□□□ 0.25
CBX3-203ENST00000409747 PRKAG3Q9UGI9 489 aa16.6■□□□□ 0.25
CBX3-203ENST00000409747 SEPT9Q9UHD8 586 aaPredicted RBP16.6■□□□□ 0.25
CBX3-203ENST00000409747 SSTR3P32745 418 aaPredicted RBP16.59■□□□□ 0.25
CBX3-203ENST00000409747 GATMP50440 423 aa16.59■□□□□ 0.25
CBX3-203ENST00000409747 UBE3AQ05086 875 aa16.59■□□□□ 0.25
CBX3-203ENST00000409747 SCRN1Q12765 414 aa16.59■□□□□ 0.25
CBX3-203ENST00000409747 NPY5RQ15761 445 aa16.59■□□□□ 0.25
CBX3-203ENST00000409747 ETNPPLQ8TBG4 499 aa16.59■□□□□ 0.25
CBX3-203ENST00000409747 SPPL3Q8TCT6 385 aa16.59■□□□□ 0.25
CBX3-203ENST00000409747 POF1BQ8WVV4 589 aa16.59■□□□□ 0.25
CBX3-203ENST00000409747 AIFM3Q96NN9 605 aa16.59■□□□□ 0.25
CBX3-203ENST00000409747 NAP1L4Q99733 375 aaKnown RBP16.59■□□□□ 0.25
CBX3-203ENST00000409747 CSPG5O95196 566 aa16.59■□□□□ 0.25
CBX3-203ENST00000409747 GCFC2P16383 781 aaKnown RBP16.59■□□□□ 0.25
CBX3-203ENST00000409747 DNM2P50570 870 aa16.59■□□□□ 0.25
CBX3-203ENST00000409747 GPC3P51654 580 aa16.59■□□□□ 0.25
CBX3-203ENST00000409747 FAM189BP81408 668 aa16.59■□□□□ 0.25
CBX3-203ENST00000409747 DSC3Q14574 896 aa16.59■□□□□ 0.25
CBX3-203ENST00000409747 INF2Q27J81 1249 aa16.59■□□□□ 0.25
CBX3-203ENST00000409747 ERICH6BQ5W0A0 696 aa16.59■□□□□ 0.25
CBX3-203ENST00000409747 B3GNT9Q6UX72 402 aa16.59■□□□□ 0.25
CBX3-203ENST00000409747 WASF1Q92558 559 aa16.59■□□□□ 0.25
CBX3-203ENST00000409747 PHF20Q9BVI0 1012 aa16.59■□□□□ 0.25
CBX3-203ENST00000409747 NIFKQ9BYG3 293 aaKnown RBP16.59■□□□□ 0.25
CBX3-203ENST00000409747 PPP4R2Q9NY27 417 aa16.59■□□□□ 0.25
CBX3-203ENST00000409747 FSD2A1L4K1 749 aa16.58■□□□□ 0.24
CBX3-203ENST00000409747 PFKFB2O60825 505 aa16.58■□□□□ 0.24
CBX3-203ENST00000409747 DKC1O60832 514 aaKnown RBP eCLIP16.58■□□□□ 0.24
CBX3-203ENST00000409747 LAG3P18627 525 aa16.58■□□□□ 0.24
CBX3-203ENST00000409747 CAMK1Q14012 370 aa16.58■□□□□ 0.24
CBX3-203ENST00000409747 TARBP2Q15633 366 aaKnown RBP16.58■□□□□ 0.24
CBX3-203ENST00000409747 LETM2Q2VYF4 491 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 114.3 ms