RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 USP33Q8TEY7 942 aa9.01□□□□□ -0.97
SCN9A-203ENST00000409672 TRAF3IP3Q9Y228 551 aa9.01□□□□□ -0.97
SCN9A-203ENST00000409672 KIF21AQ7Z4S6 1674 aa9□□□□□ -0.97
SCN9A-203ENST00000409672 CHEK2O96017 543 aa9□□□□□ -0.97
SCN9A-203ENST00000409672 RARBP10826 455 aa9□□□□□ -0.97
SCN9A-203ENST00000409672 APOBEC3FQ8IUX4 373 aaKnown RBP9□□□□□ -0.97
SCN9A-203ENST00000409672 SLC13A1Q9BZW2 595 aa9□□□□□ -0.97
SCN9A-203ENST00000409672 SLC25A13Q9UJS0 675 aa9□□□□□ -0.97
SCN9A-203ENST00000409672 ATP9BO43861 1147 aa9□□□□□ -0.97
SCN9A-203ENST00000409672 H2AFZP0C0S5 128 aa9□□□□□ -0.97
SCN9A-203ENST00000409672 PBLDP30039 288 aaPredicted RBP9□□□□□ -0.97
SCN9A-203ENST00000409672 SYTL3Q4VX76 610 aa9□□□□□ -0.97
SCN9A-203ENST00000409672 ZNF667Q5HYK9 610 aa9□□□□□ -0.97
SCN9A-203ENST00000409672 FOXR1Q6PIV2 292 aa9□□□□□ -0.97
SCN9A-203ENST00000409672 TMEM270Q6UE05 265 aa9□□□□□ -0.97
SCN9A-203ENST00000409672 H2AFVQ71UI9 128 aa9□□□□□ -0.97
SCN9A-203ENST00000409672 ATP11CQ8NB49 1132 aa9□□□□□ -0.97
SCN9A-203ENST00000409672 PIGBQ92521 554 aa9□□□□□ -0.97
SCN9A-203ENST00000409672 DCUN1D1Q96GG9 259 aa9□□□□□ -0.97
SCN9A-203ENST00000409672 PUS7LQ9H0K6 701 aaKnown RBP9□□□□□ -0.97
SCN9A-203ENST00000409672 LRRC53A6NM62 1247 aa9□□□□□ -0.97
SCN9A-203ENST00000409672 USP17L10C9JJH3 530 aa9□□□□□ -0.97
SCN9A-203ENST00000409672 ASNSP08243 561 aa9□□□□□ -0.97
SCN9A-203ENST00000409672 ATL3Q6DD88 541 aa9□□□□□ -0.97
SCN9A-203ENST00000409672 TRIM58Q8NG06 486 aa9□□□□□ -0.97
SCN9A-203ENST00000409672 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9□□□□□ -0.97
SCN9A-203ENST00000409672 RRAGCQ9HB90 399 aa9□□□□□ -0.97
SCN9A-203ENST00000409672 CNOT7Q9UIV1 285 aaKnown RBP9□□□□□ -0.97
SCN9A-203ENST00000409672 FBXL21Q9UKT6 434 aa9□□□□□ -0.97
SCN9A-203ENST00000409672 TBX22Q9Y458 520 aa9□□□□□ -0.97
SCN9A-203ENST00000409672 SPDYE5A6NIY4 337 aa9□□□□□ -0.97
SCN9A-203ENST00000409672 APOA4P06727 396 aa9□□□□□ -0.97
SCN9A-203ENST00000409672 PLCG1P19174 1290 aa9□□□□□ -0.97
SCN9A-203ENST00000409672 HUNKP57058 714 aa9□□□□□ -0.97
SCN9A-203ENST00000409672 SPDYE7PQ495Y7 208 aa9□□□□□ -0.97
SCN9A-203ENST00000409672 TRIM48Q8IWZ4 208 aa9□□□□□ -0.97
SCN9A-203ENST00000409672 WDR11Q9BZH6 1224 aa9□□□□□ -0.97
SCN9A-203ENST00000409672 TMEM260Q9NX78 707 aa9□□□□□ -0.97
SCN9A-203ENST00000409672 PHKA2P46019 1235 aa9□□□□□ -0.97
SCN9A-203ENST00000409672 PDCD2Q16342 344 aaPredicted RBP9□□□□□ -0.97
SCN9A-203ENST00000409672 BTBD8Q5XKL5 378 aa9□□□□□ -0.97
SCN9A-203ENST00000409672 BHMT2Q9H2M3 363 aa9□□□□□ -0.97
SCN9A-203ENST00000409672 KLHL11Q9NVR0 708 aa9□□□□□ -0.97
SCN9A-203ENST00000409672 CPSF2Q9P2I0 782 aaKnown RBP9□□□□□ -0.97
SCN9A-203ENST00000409672 EFCAB8A8MWE9 144 aa9□□□□□ -0.97
SCN9A-203ENST00000409672 F8W8V4 182 aa9□□□□□ -0.97
SCN9A-203ENST00000409672 MKRN4PQ13434 485 aaPredicted RBP9□□□□□ -0.97
SCN9A-203ENST00000409672 SH3BP1Q9Y3L3 701 aa9□□□□□ -0.97
SCN9A-203ENST00000409672 PCCAP05165 728 aaPredicted RBP9□□□□□ -0.97
SCN9A-203ENST00000409672 PEX19P40855 299 aa9□□□□□ -0.97
SCN9A-203ENST00000409672 AMHR2Q16671 573 aa9□□□□□ -0.97
SCN9A-203ENST00000409672 MFSD1Q9H3U5 465 aa9□□□□□ -0.97
SCN9A-203ENST00000409672 SPTLC3Q9NUV7 552 aa9□□□□□ -0.97
SCN9A-203ENST00000409672 KCNQ2O43526 872 aa8.99□□□□□ -0.97
SCN9A-203ENST00000409672 CYBBP04839 570 aa8.99□□□□□ -0.97
SCN9A-203ENST00000409672 CAPZA2P47755 286 aa8.99□□□□□ -0.97
SCN9A-203ENST00000409672 TADA2BQ86TJ2 420 aa8.99□□□□□ -0.97
SCN9A-203ENST00000409672 RASSF3Q86WH2 238 aa8.99□□□□□ -0.97
SCN9A-203ENST00000409672 TCP11Q8WWU5 503 aa8.99□□□□□ -0.97
SCN9A-203ENST00000409672 ZNF512Q96ME7 567 aaPredicted RBP8.99□□□□□ -0.97
SCN9A-203ENST00000409672 UNC45AQ9H3U1 944 aa8.99□□□□□ -0.97
SCN9A-203ENST00000409672 A8MXQ7 604 aa8.99□□□□□ -0.97
SCN9A-203ENST00000409672 ENDOD1O94919 500 aa8.99□□□□□ -0.97
SCN9A-203ENST00000409672 PLEKHA8P1O95397 391 aa8.99□□□□□ -0.97
SCN9A-203ENST00000409672 BRD2P25440 801 aaKnown RBP8.99□□□□□ -0.97
SCN9A-203ENST00000409672 ETFBP38117 255 aa8.99□□□□□ -0.97
SCN9A-203ENST00000409672 DDIASQ8IXT1 998 aa8.99□□□□□ -0.97
SCN9A-203ENST00000409672 TTC17Q96AE7 1141 aa8.99□□□□□ -0.97
SCN9A-203ENST00000409672 CCDC90BQ9GZT6 254 aa8.99□□□□□ -0.97
SCN9A-203ENST00000409672 VPS11Q9H270 941 aa8.99□□□□□ -0.97
SCN9A-203ENST00000409672 CAPN7Q9Y6W3 813 aa8.99□□□□□ -0.97
SCN9A-203ENST00000409672 PALLDQ8WX93 1383 aa8.99□□□□□ -0.97
SCN9A-203ENST00000409672 BPIFB4P59827 614 aa8.99□□□□□ -0.97
SCN9A-203ENST00000409672 GRAPQ13588 217 aa8.99□□□□□ -0.97
SCN9A-203ENST00000409672 GTF2H3Q13889 308 aa8.99□□□□□ -0.97
SCN9A-203ENST00000409672 NBPF20Q3BBV1 942 aa8.99□□□□□ -0.97
SCN9A-203ENST00000409672 NBPF10Q6P3W6 841 aaKnown RBP8.99□□□□□ -0.97
SCN9A-203ENST00000409672 GRAPLQ8TC17 118 aaPredicted RBP8.99□□□□□ -0.97
SCN9A-203ENST00000409672 PYROXD1Q8WU10 500 aa8.99□□□□□ -0.97
SCN9A-203ENST00000409672 EPB41L5Q9HCM4 733 aa8.99□□□□□ -0.97
SCN9A-203ENST00000409672 TSKSQ9UJT2 592 aa8.99□□□□□ -0.97
SCN9A-203ENST00000409672 MT-ND3P03897 115 aa8.99□□□□□ -0.97
SCN9A-203ENST00000409672 CHMP1BQ7LBR1 199 aa8.99□□□□□ -0.97
SCN9A-203ENST00000409672 MICALL2Q8IY33 904 aa8.99□□□□□ -0.97
SCN9A-203ENST00000409672 ZFYVE28Q9HCC9 887 aa8.99□□□□□ -0.97
SCN9A-203ENST00000409672 SCUBE2Q9NQ36 999 aa8.99□□□□□ -0.97
SCN9A-203ENST00000409672 HYOU1Q9Y4L1 999 aa8.99□□□□□ -0.97
SCN9A-203ENST00000409672 KIF1BO60333 1816 aa8.99□□□□□ -0.97
SCN9A-203ENST00000409672 FOSP01100 380 aaPredicted RBP8.99□□□□□ -0.97
SCN9A-203ENST00000409672 ERFP50548 548 aa8.99□□□□□ -0.97
SCN9A-203ENST00000409672 WASHC5Q12768 1159 aa8.99□□□□□ -0.97
SCN9A-203ENST00000409672 C8orf34Q49A92 452 aa8.99□□□□□ -0.97
SCN9A-203ENST00000409672 EFHBQ8N7U6 833 aa8.99□□□□□ -0.97
SCN9A-203ENST00000409672 RNF146Q9NTX7 359 aa8.99□□□□□ -0.97
SCN9A-203ENST00000409672 ATP11BQ9Y2G3 1177 aa8.99□□□□□ -0.97
SCN9A-203ENST00000409672 DDX5P17844 614 aaKnown RBP8.99□□□□□ -0.97
SCN9A-203ENST00000409672 MAP4P27816 1152 aaKnown RBP8.99□□□□□ -0.97
SCN9A-203ENST00000409672 PWP1Q13610 501 aa8.99□□□□□ -0.97
SCN9A-203ENST00000409672 TOMM20Q15388 145 aa8.99□□□□□ -0.97
SCN9A-203ENST00000409672 DYDC2Q96IM9 177 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms