RNA–Protein interactions for RNA: ENST00000409543.6

TSPAN4-209, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,031 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-209ENST00000409543 ASB2Q96Q27 587 aa22.07■■□□□ 1.12
TSPAN4-209ENST00000409543 VAV3Q9UKW4 847 aa22.07■■□□□ 1.12
TSPAN4-209ENST00000409543 ADGRA3Q8IWK6 1321 aa22.06■■□□□ 1.12
TSPAN4-209ENST00000409543 STBD1O95210 358 aa22.06■■□□□ 1.12
TSPAN4-209ENST00000409543 MMP1P03956 469 aa22.06■■□□□ 1.12
TSPAN4-209ENST00000409543 ST3GAL1Q11201 340 aa22.06■■□□□ 1.12
TSPAN4-209ENST00000409543 TRIM29Q14134 588 aa22.06■■□□□ 1.12
TSPAN4-209ENST00000409543 SKIV2LQ15477 1246 aaKnown RBP22.06■■□□□ 1.12
TSPAN4-209ENST00000409543 NPAS4Q8IUM7 802 aa22.06■■□□□ 1.12
TSPAN4-209ENST00000409543 MAP7D2Q96T17 732 aa22.06■■□□□ 1.12
TSPAN4-209ENST00000409543 OSMRQ99650 979 aa22.06■■□□□ 1.12
TSPAN4-209ENST00000409543 ST3GAL5Q9UNP4 418 aa22.06■■□□□ 1.12
TSPAN4-209ENST00000409543 AKT3Q9Y243 479 aa22.06■■□□□ 1.12
TSPAN4-209ENST00000409543 H3BNC9 293 aa22.05■■□□□ 1.12
TSPAN4-209ENST00000409543 EML1O00423 815 aa22.05■■□□□ 1.12
TSPAN4-209ENST00000409543 STAG3L1P0CL83 205 aa22.05■■□□□ 1.12
TSPAN4-209ENST00000409543 PSMC5P62195 406 aa22.05■■□□□ 1.12
TSPAN4-209ENST00000409543 TBC1D8BQ0IIM8 1120 aa22.05■■□□□ 1.12
TSPAN4-209ENST00000409543 LRRC71Q8N4P6 559 aa22.05■■□□□ 1.12
TSPAN4-209ENST00000409543 HAS1Q92839 578 aa22.05■■□□□ 1.12
TSPAN4-209ENST00000409543 PPP1R16BQ96T49 567 aa22.05■■□□□ 1.12
TSPAN4-209ENST00000409543 ADAMTS10Q9H324 1103 aa22.05■■□□□ 1.12
TSPAN4-209ENST00000409543 SEPT9Q9UHD8 586 aaPredicted RBP22.05■■□□□ 1.12
TSPAN4-209ENST00000409543 FAM205CA6NFA0 338 aa22.04■■□□□ 1.12
TSPAN4-209ENST00000409543 MARCH6O60337 910 aa22.04■■□□□ 1.12
TSPAN4-209ENST00000409543 NLRP11P59045 1033 aaKnown RBP22.04■■□□□ 1.12
TSPAN4-209ENST00000409543 BTG3Q14201 252 aaPredicted RBP22.04■■□□□ 1.12
TSPAN4-209ENST00000409543 FAM228AQ86W67 206 aa22.04■■□□□ 1.12
TSPAN4-209ENST00000409543 CLP1Q92989 425 aaKnown RBP22.04■■□□□ 1.12
TSPAN4-209ENST00000409543 CEP89Q96ST8 783 aa22.04■■□□□ 1.12
TSPAN4-209ENST00000409543 KIF2CQ99661 725 aa22.04■■□□□ 1.12
TSPAN4-209ENST00000409543 RGS18Q9NS28 235 aa22.04■■□□□ 1.12
TSPAN4-209ENST00000409543 COG5Q9UP83 839 aa22.04■■□□□ 1.12
TSPAN4-209ENST00000409543 RWDD3Q9Y3V2 267 aa22.04■■□□□ 1.12
TSPAN4-209ENST00000409543 RALGAPA2Q2PPJ7 1873 aa22.04■■□□□ 1.12
TSPAN4-209ENST00000409543 NLRC5Q86WI3 1866 aa22.03■■□□□ 1.12
TSPAN4-209ENST00000409543 DDX11L8A8MPP1 907 aa22.03■■□□□ 1.12
TSPAN4-209ENST00000409543 BTBD18B2RXH4 712 aa22.03■■□□□ 1.12
TSPAN4-209ENST00000409543 C5orf67F2Z3F1 127 aa22.03■■□□□ 1.12
TSPAN4-209ENST00000409543 MGEA5O60502 916 aa22.03■■□□□ 1.12
TSPAN4-209ENST00000409543 DKC1O60832 514 aaKnown RBP eCLIP22.03■■□□□ 1.12
TSPAN4-209ENST00000409543 RB1P06400 928 aa22.03■■□□□ 1.12
TSPAN4-209ENST00000409543 LINC00271P0C7V0 271 aa22.03■■□□□ 1.12
TSPAN4-209ENST00000409543 QARSP47897 775 aaKnown RBP22.03■■□□□ 1.12
TSPAN4-209ENST00000409543 SARSP49591 514 aaKnown RBP22.03■■□□□ 1.12
TSPAN4-209ENST00000409543 GPM6BQ13491 265 aa22.03■■□□□ 1.12
TSPAN4-209ENST00000409543 PTPROQ16827 1216 aa22.03■■□□□ 1.12
TSPAN4-209ENST00000409543 MTERF2Q49AM1 385 aa22.03■■□□□ 1.12
TSPAN4-209ENST00000409543 POTEDQ86YR6 584 aa22.03■■□□□ 1.12
TSPAN4-209ENST00000409543 DIS3L2Q8IYB7 885 aaKnown RBP22.03■■□□□ 1.12
TSPAN4-209ENST00000409543 SLFN12Q8IYM2 578 aa22.03■■□□□ 1.12
TSPAN4-209ENST00000409543 CMTR2Q8IYT2 770 aaKnown RBP22.03■■□□□ 1.12
TSPAN4-209ENST00000409543 BANK1Q8NDB2 785 aa22.03■■□□□ 1.12
TSPAN4-209ENST00000409543 MRPL38Q96DV4 380 aaKnown RBP22.03■■□□□ 1.12
TSPAN4-209ENST00000409543 ZSCAN31Q96LW9 406 aaPredicted RBP22.03■■□□□ 1.12
TSPAN4-209ENST00000409543 ADAM2Q99965 735 aa22.03■■□□□ 1.12
TSPAN4-209ENST00000409543 LLPHQ9BRT6 129 aaKnown RBP22.03■■□□□ 1.12
TSPAN4-209ENST00000409543 C1orf112Q9NSG2 853 aa22.03■■□□□ 1.12
TSPAN4-209ENST00000409543 RNF216Q9NWF9 866 aaPredicted RBP22.03■■□□□ 1.12
TSPAN4-209ENST00000409543 VCANP13611 3396 aa22.02■■□□□ 1.12
TSPAN4-209ENST00000409543 DENND3A2RUS2 1198 aa22.02■■□□□ 1.12
TSPAN4-209ENST00000409543 BAG4O95429 457 aaKnown RBP22.02■■□□□ 1.12
TSPAN4-209ENST00000409543 BMPR1AP36894 532 aa22.02■■□□□ 1.12
TSPAN4-209ENST00000409543 AAK1Q2M2I8 961 aa22.02■■□□□ 1.12
TSPAN4-209ENST00000409543 SLC24A5Q71RS6 500 aa22.02■■□□□ 1.12
TSPAN4-209ENST00000409543 LRFN2Q9ULH4 789 aa22.02■■□□□ 1.12
TSPAN4-209ENST00000409543 TTC28Q96AY4 2481 aa22.02■■□□□ 1.12
TSPAN4-209ENST00000409543 IGKV6-21A0A0C4DH24 114 aa22.01■■□□□ 1.11
TSPAN4-209ENST00000409543 TMEM150BA6NC51 233 aa22.01■■□□□ 1.11
TSPAN4-209ENST00000409543 P4HBP07237 508 aaKnown RBP22.01■■□□□ 1.11
TSPAN4-209ENST00000409543 EIF4BP23588 611 aaKnown RBP22.01■■□□□ 1.11
TSPAN4-209ENST00000409543 CTNNB1P35222 781 aa22.01■■□□□ 1.11
TSPAN4-209ENST00000409543 RBM25P49756 843 aaKnown RBP22.01■■□□□ 1.11
TSPAN4-209ENST00000409543 GPC3P51654 580 aa22.01■■□□□ 1.11
TSPAN4-209ENST00000409543 CDC42EP1Q00587 391 aa22.01■■□□□ 1.11
TSPAN4-209ENST00000409543 EPHA7Q15375 998 aa22.01■■□□□ 1.11
TSPAN4-209ENST00000409543 ANO5Q75V66 913 aa22.01■■□□□ 1.11
TSPAN4-209ENST00000409543 CCDC83Q8IWF9 413 aa22.01■■□□□ 1.11
TSPAN4-209ENST00000409543 HLA-CQ95604 372 aa22.01■■□□□ 1.11
TSPAN4-209ENST00000409543 PCDHB7Q9Y5E2 793 aa22.01■■□□□ 1.11
TSPAN4-209ENST00000409543 C9IYK1 514 aa22■■□□□ 1.11
TSPAN4-209ENST00000409543 MAFO75444 373 aaPredicted RBP22■■□□□ 1.11
TSPAN4-209ENST00000409543 DNM2P50570 870 aa22■■□□□ 1.11
TSPAN4-209ENST00000409543 FOSBP53539 338 aa22■■□□□ 1.11
TSPAN4-209ENST00000409543 TFF2Q03403 129 aa22■■□□□ 1.11
TSPAN4-209ENST00000409543 SPIRE1Q08AE8 756 aa22■■□□□ 1.11
TSPAN4-209ENST00000409543 DSC3Q14574 896 aa22■■□□□ 1.11
TSPAN4-209ENST00000409543 SH2D3AQ9BRG2 576 aa22■■□□□ 1.11
TSPAN4-209ENST00000409543 C11orf84Q9BUA3 381 aaPredicted RBP22■■□□□ 1.11
TSPAN4-209ENST00000409543 SH2B1Q9NRF2 756 aaPredicted RBP22■■□□□ 1.11
TSPAN4-209ENST00000409543 DARSP14868 501 aaKnown RBP21.99■■□□□ 1.11
TSPAN4-209ENST00000409543 FAM189BP81408 668 aa21.99■■□□□ 1.11
TSPAN4-209ENST00000409543 DRP2Q13474 957 aa21.99■■□□□ 1.11
TSPAN4-209ENST00000409543 SAFBQ15424 915 aaKnown RBP eCLIP21.99■■□□□ 1.11
TSPAN4-209ENST00000409543 NCAPH2Q6IBW4 605 aa21.99■■□□□ 1.11
TSPAN4-209ENST00000409543 IL27Q8NEV9 243 aa21.99■■□□□ 1.11
TSPAN4-209ENST00000409543 JPH2Q9BR39 696 aaPredicted RBP21.99■■□□□ 1.11
TSPAN4-209ENST00000409543 PLVAPQ9BX97 442 aa21.99■■□□□ 1.11
TSPAN4-209ENST00000409543 CYP26B1Q9NR63 512 aa21.99■■□□□ 1.11
TSPAN4-209ENST00000409543 MRPL42Q9Y6G3 142 aaKnown RBP21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms