RNA–Protein interactions for RNA: ENST00000408684.1

SNORD88.1-201, humanhuman

BASIC

Gene SNORD88, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88.1-201ENST00000408684 LTKP29376 864 aa3.06□□□□□ -1.92
SNORD88.1-201ENST00000408684 CXCR5P32302 372 aa3.06□□□□□ -1.92
SNORD88.1-201ENST00000408684 GUCY1A2P33402 732 aa3.06□□□□□ -1.92
SNORD88.1-201ENST00000408684 PHBP35232 272 aa3.06□□□□□ -1.92
SNORD88.1-201ENST00000408684 PEX19P40855 299 aa3.06□□□□□ -1.92
SNORD88.1-201ENST00000408684 SLC1A4P43007 532 aa3.06□□□□□ -1.92
SNORD88.1-201ENST00000408684 CTCFP49711 727 aaPredicted RBP3.06□□□□□ -1.92
SNORD88.1-201ENST00000408684 CCNHP51946 323 aaPredicted RBP3.06□□□□□ -1.92
SNORD88.1-201ENST00000408684 POLGP54098 1239 aaPredicted RBP3.06□□□□□ -1.92
SNORD88.1-201ENST00000408684 POLR2FP61218 127 aaKnown RBP3.06□□□□□ -1.92
SNORD88.1-201ENST00000408684 SNRPFP62306 86 aaKnown RBP3.06□□□□□ -1.92
SNORD88.1-201ENST00000408684 ERVK-9P63128 1117 aa3.06□□□□□ -1.92
SNORD88.1-201ENST00000408684 OCRLQ01968 901 aa3.06□□□□□ -1.92
SNORD88.1-201ENST00000408684 FUT2Q10981 343 aa3.06□□□□□ -1.92
SNORD88.1-201ENST00000408684 MAPK7Q13164 816 aa3.06□□□□□ -1.92
SNORD88.1-201ENST00000408684 ADAM9Q13443 819 aa3.06□□□□□ -1.92
SNORD88.1-201ENST00000408684 LAMB3Q13751 1172 aa3.06□□□□□ -1.92
SNORD88.1-201ENST00000408684 MLECQ14165 292 aa3.06□□□□□ -1.92
SNORD88.1-201ENST00000408684 MYBPC2Q14324 1141 aa3.06□□□□□ -1.92
SNORD88.1-201ENST00000408684 SPARCL1Q14515 664 aa3.06□□□□□ -1.92
SNORD88.1-201ENST00000408684 FRMPD4Q14CM0 1322 aa3.06□□□□□ -1.92
SNORD88.1-201ENST00000408684 NKX1-1Q15270 411 aaPredicted RBP3.06□□□□□ -1.92
SNORD88.1-201ENST00000408684 MTFR1Q15390 333 aa3.06□□□□□ -1.92
SNORD88.1-201ENST00000408684 ENOX2Q16206 610 aaKnown RBP3.06□□□□□ -1.92
SNORD88.1-201ENST00000408684 CNGA2Q16280 664 aa3.06□□□□□ -1.92
SNORD88.1-201ENST00000408684 DBN1Q16643 649 aa3.06□□□□□ -1.92
SNORD88.1-201ENST00000408684 NFIL3Q16649 462 aa3.06□□□□□ -1.92
SNORD88.1-201ENST00000408684 PTPN21Q16825 1174 aa3.06□□□□□ -1.92
SNORD88.1-201ENST00000408684 EXOC3L4Q17RC7 722 aa3.06□□□□□ -1.92
SNORD88.1-201ENST00000408684 FAM153CQ494X1 144 aa3.06□□□□□ -1.92
SNORD88.1-201ENST00000408684 TMEM259Q4ZIN3 620 aa3.06□□□□□ -1.92
SNORD88.1-201ENST00000408684 ZC3H12AQ5D1E8 599 aaKnown RBP3.06□□□□□ -1.92
SNORD88.1-201ENST00000408684 FAM26FQ5R3K3 315 aa3.06□□□□□ -1.92
SNORD88.1-201ENST00000408684 WDR78Q5VTH9 848 aa3.06□□□□□ -1.92
SNORD88.1-201ENST00000408684 HGSNATQ68CP4 663 aa3.06□□□□□ -1.92
SNORD88.1-201ENST00000408684 TNS3Q68CZ2 1445 aa3.06□□□□□ -1.92
SNORD88.1-201ENST00000408684 DUPD1Q68J44 220 aa3.06□□□□□ -1.92
SNORD88.1-201ENST00000408684 KLC3Q6P597 504 aa3.06□□□□□ -1.92
SNORD88.1-201ENST00000408684 CCDC62Q6P9F0 684 aa3.06□□□□□ -1.92
SNORD88.1-201ENST00000408684 USP49Q70CQ1 688 aa3.06□□□□□ -1.92
SNORD88.1-201ENST00000408684 CENPUQ71F23 418 aa3.06□□□□□ -1.92
SNORD88.1-201ENST00000408684 ASRGL1Q7L266 308 aa3.06□□□□□ -1.92
SNORD88.1-201ENST00000408684 PODNQ7Z5L7 613 aa3.06□□□□□ -1.92
SNORD88.1-201ENST00000408684 USP37Q86T82 979 aa3.06□□□□□ -1.92
SNORD88.1-201ENST00000408684 CASZ1Q86V15 1759 aa3.06□□□□□ -1.92
SNORD88.1-201ENST00000408684 FAM228AQ86W67 206 aa3.06□□□□□ -1.92
SNORD88.1-201ENST00000408684 RELL1Q8IUW5 271 aa3.06□□□□□ -1.92
SNORD88.1-201ENST00000408684 PASD1Q8IV76 773 aa3.06□□□□□ -1.92
SNORD88.1-201ENST00000408684 CROCCP3Q8IVE0 287 aa3.06□□□□□ -1.92
SNORD88.1-201ENST00000408684 TRIM59Q8IWR1 403 aa3.06□□□□□ -1.92
SNORD88.1-201ENST00000408684 HOMEZQ8IX15 550 aa3.06□□□□□ -1.92
SNORD88.1-201ENST00000408684 SLF2Q8IX21 1173 aa3.06□□□□□ -1.92
SNORD88.1-201ENST00000408684 CCDC105Q8IYK2 499 aa3.06□□□□□ -1.92
SNORD88.1-201ENST00000408684 SLFN12Q8IYM2 578 aa3.06□□□□□ -1.92
SNORD88.1-201ENST00000408684 RNF168Q8IYW5 571 aaPredicted RBP3.06□□□□□ -1.92
SNORD88.1-201ENST00000408684 ST13P4Q8IZP2 240 aaPredicted RBP3.06□□□□□ -1.92
SNORD88.1-201ENST00000408684 ZNF444Q8N0Y2 327 aaPredicted RBP3.06□□□□□ -1.92
SNORD88.1-201ENST00000408684 LARGE2Q8N3Y3 721 aa3.06□□□□□ -1.92
SNORD88.1-201ENST00000408684 CCDC82Q8N4S0 544 aa3.06□□□□□ -1.92
SNORD88.1-201ENST00000408684 C4orf32Q8N8J7 132 aa3.06□□□□□ -1.92
SNORD88.1-201ENST00000408684 ENAHQ8N8S7 591 aaPredicted RBP3.06□□□□□ -1.92
SNORD88.1-201ENST00000408684 CCDC89Q8N998 374 aa3.06□□□□□ -1.92
SNORD88.1-201ENST00000408684 SPDYE1Q8NFV5 336 aaPredicted RBP3.06□□□□□ -1.92
SNORD88.1-201ENST00000408684 TTLL11Q8NHH1 800 aa3.06□□□□□ -1.92
SNORD88.1-201ENST00000408684 ATL2Q8NHH9 583 aa3.06□□□□□ -1.92
SNORD88.1-201ENST00000408684 TPCN2Q8NHX9 752 aa3.06□□□□□ -1.92
SNORD88.1-201ENST00000408684 FAM81AQ8TBF8 368 aa3.06□□□□□ -1.92
SNORD88.1-201ENST00000408684 TBC1D16Q8TBP0 767 aa3.06□□□□□ -1.92
SNORD88.1-201ENST00000408684 RNF217Q8TC41 542 aa3.06□□□□□ -1.92
SNORD88.1-201ENST00000408684 OXER1Q8TDS5 423 aa3.06□□□□□ -1.92
SNORD88.1-201ENST00000408684 LRRC8CQ8TDW0 803 aa3.06□□□□□ -1.92
SNORD88.1-201ENST00000408684 AGAP11Q8TF27 550 aa3.06□□□□□ -1.92
SNORD88.1-201ENST00000408684 TEKT4Q8WW24 435 aa3.06□□□□□ -1.92
SNORD88.1-201ENST00000408684 CKAP2Q8WWK9 683 aa3.06□□□□□ -1.92
SNORD88.1-201ENST00000408684 CNTNAP5Q8WYK1 1306 aa3.06□□□□□ -1.92
SNORD88.1-201ENST00000408684 IRGQQ8WZA9 623 aa3.06□□□□□ -1.92
SNORD88.1-201ENST00000408684 BAP1Q92560 729 aa3.06□□□□□ -1.92
SNORD88.1-201ENST00000408684 SLCO2A1Q92959 643 aa3.06□□□□□ -1.92
SNORD88.1-201ENST00000408684 ARHGEF2Q92974 986 aaKnown RBP3.06□□□□□ -1.92
SNORD88.1-201ENST00000408684 TEKT1Q969V4 418 aa3.06□□□□□ -1.92
SNORD88.1-201ENST00000408684 OPTNQ96CV9 577 aa3.06□□□□□ -1.92
SNORD88.1-201ENST00000408684 MTMR8Q96EF0 704 aa3.06□□□□□ -1.92
SNORD88.1-201ENST00000408684 FAM212AQ96EL1 285 aa3.06□□□□□ -1.92
SNORD88.1-201ENST00000408684 TRIM11Q96F44 468 aa3.06□□□□□ -1.92
SNORD88.1-201ENST00000408684 HES6Q96HZ4 224 aa3.06□□□□□ -1.92
SNORD88.1-201ENST00000408684 CFAP57Q96MR6 1250 aa3.06□□□□□ -1.92
SNORD88.1-201ENST00000408684 ROBO3Q96MS0 1386 aa3.06□□□□□ -1.92
SNORD88.1-201ENST00000408684 SMC6Q96SB8 1091 aa3.06□□□□□ -1.92
SNORD88.1-201ENST00000408684 PRMT1Q99873 361 aaKnown RBP3.06□□□□□ -1.92
SNORD88.1-201ENST00000408684 SIKE1Q9BRV8 207 aa3.06□□□□□ -1.92
SNORD88.1-201ENST00000408684 MYL10Q9BUA6 226 aa3.06□□□□□ -1.92
SNORD88.1-201ENST00000408684 MKNK1Q9BUB5 465 aa3.06□□□□□ -1.92
SNORD88.1-201ENST00000408684 LSM14BQ9BX40 385 aaKnown RBP3.06□□□□□ -1.92
SNORD88.1-201ENST00000408684 ANKRD2Q9GZV1 360 aa3.06□□□□□ -1.92
SNORD88.1-201ENST00000408684 SENP3Q9H4L4 574 aaPredicted RBP3.06□□□□□ -1.92
SNORD88.1-201ENST00000408684 Q9H521 79 aa3.06□□□□□ -1.92
SNORD88.1-201ENST00000408684 SYNCQ9H7C4 482 aa3.06□□□□□ -1.92
SNORD88.1-201ENST00000408684 ARMT1Q9H993 441 aa3.06□□□□□ -1.92
SNORD88.1-201ENST00000408684 ETNK1Q9HBU6 452 aa3.06□□□□□ -1.92
SNORD88.1-201ENST00000408684 SLC24A3Q9HC58 644 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms