RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 GTF3C6Q969F1 213 aa21.74■■□□□ 1.07
SMARCB1-204ENST00000407422 MRPL38Q96DV4 380 aaKnown RBP21.74■■□□□ 1.07
SMARCB1-204ENST00000407422 ST3GAL5Q9UNP4 418 aa21.74■■□□□ 1.07
SMARCB1-204ENST00000407422 TMEM150BA6NC51 233 aa21.73■■□□□ 1.07
SMARCB1-204ENST00000407422 IBSPP21815 317 aaPredicted RBP21.73■■□□□ 1.07
SMARCB1-204ENST00000407422 CRYBB1P53674 252 aaPredicted RBP21.73■■□□□ 1.07
SMARCB1-204ENST00000407422 AAK1Q2M2I8 961 aa21.73■■□□□ 1.07
SMARCB1-204ENST00000407422 EARS2Q5JPH6 523 aaKnown RBP21.73■■□□□ 1.07
SMARCB1-204ENST00000407422 PIK3AP1Q6ZUJ8 805 aa21.73■■□□□ 1.07
SMARCB1-204ENST00000407422 NPAS4Q8IUM7 802 aa21.73■■□□□ 1.07
SMARCB1-204ENST00000407422 IL27Q8NEV9 243 aa21.73■■□□□ 1.07
SMARCB1-204ENST00000407422 NECAB3Q96P71 396 aaPredicted RBP21.73■■□□□ 1.07
SMARCB1-204ENST00000407422 BMPR1AP36894 532 aa21.73■■□□□ 1.07
SMARCB1-204ENST00000407422 GATMP50440 423 aa21.73■■□□□ 1.07
SMARCB1-204ENST00000407422 NEK8Q86SG6 692 aa21.73■■□□□ 1.07
SMARCB1-204ENST00000407422 FAM228AQ86W67 206 aa21.73■■□□□ 1.07
SMARCB1-204ENST00000407422 RDM1Q8NG50 284 aa21.73■■□□□ 1.07
SMARCB1-204ENST00000407422 CLP1Q92989 425 aaKnown RBP21.73■■□□□ 1.07
SMARCB1-204ENST00000407422 UHRF1Q96T88 793 aaPredicted RBP21.73■■□□□ 1.07
SMARCB1-204ENST00000407422 AKT3Q9Y243 479 aa21.73■■□□□ 1.07
SMARCB1-204ENST00000407422 FAM205CA6NFA0 338 aa21.72■■□□□ 1.07
SMARCB1-204ENST00000407422 STBD1O95210 358 aa21.72■■□□□ 1.07
SMARCB1-204ENST00000407422 NLRP11P59045 1033 aaKnown RBP21.72■■□□□ 1.07
SMARCB1-204ENST00000407422 PTPROQ16827 1216 aa21.72■■□□□ 1.07
SMARCB1-204ENST00000407422 ZNF668Q96K58 619 aaPredicted RBP21.72■■□□□ 1.07
SMARCB1-204ENST00000407422 ADAM2Q99965 735 aa21.72■■□□□ 1.07
SMARCB1-204ENST00000407422 SH2D3AQ9BRG2 576 aa21.72■■□□□ 1.07
SMARCB1-204ENST00000407422 MRPL42Q9Y6G3 142 aaKnown RBP21.72■■□□□ 1.07
SMARCB1-204ENST00000407422 C5orf67F2Z3F1 127 aa21.71■■□□□ 1.07
SMARCB1-204ENST00000407422 EML1O00423 815 aa21.71■■□□□ 1.07
SMARCB1-204ENST00000407422 GPR182O15218 404 aa21.71■■□□□ 1.07
SMARCB1-204ENST00000407422 CCNT1O60563 726 aaKnown RBP21.71■■□□□ 1.07
SMARCB1-204ENST00000407422 NR5A1Q13285 461 aa21.71■■□□□ 1.07
SMARCB1-204ENST00000407422 TARBP2Q15633 366 aaKnown RBP21.71■■□□□ 1.07
SMARCB1-204ENST00000407422 PAN2Q504Q3 1202 aaKnown RBP21.71■■□□□ 1.07
SMARCB1-204ENST00000407422 PPP4R3AQ6IN85 833 aa21.71■■□□□ 1.07
SMARCB1-204ENST00000407422 BANK1Q8NDB2 785 aa21.71■■□□□ 1.07
SMARCB1-204ENST00000407422 NSUN7Q8NE18 718 aaKnown RBP21.71■■□□□ 1.07
SMARCB1-204ENST00000407422 WASF1Q92558 559 aa21.71■■□□□ 1.07
SMARCB1-204ENST00000407422 ADAMTS10Q9H324 1103 aa21.71■■□□□ 1.07
SMARCB1-204ENST00000407422 KCNMB3Q9NPA1 279 aa21.71■■□□□ 1.07
SMARCB1-204ENST00000407422 SEPT9Q9UHD8 586 aaPredicted RBP21.71■■□□□ 1.07
SMARCB1-204ENST00000407422 FNDC1Q4ZHG4 1894 aaPredicted RBP21.71■■□□□ 1.07
SMARCB1-204ENST00000407422 DENND3A2RUS2 1198 aa21.7■■□□□ 1.06
SMARCB1-204ENST00000407422 TNFRSF10AO00220 468 aa21.7■■□□□ 1.06
SMARCB1-204ENST00000407422 GRM6O15303 877 aa21.7■■□□□ 1.06
SMARCB1-204ENST00000407422 JAK2O60674 1132 aa21.7■■□□□ 1.06
SMARCB1-204ENST00000407422 STAG3L1P0CL83 205 aa21.7■■□□□ 1.06
SMARCB1-204ENST00000407422 TMOD1P28289 359 aa21.7■■□□□ 1.06
SMARCB1-204ENST00000407422 SARSP49591 514 aaKnown RBP21.7■■□□□ 1.06
SMARCB1-204ENST00000407422 TBC1D8BQ0IIM8 1120 aa21.7■■□□□ 1.06
SMARCB1-204ENST00000407422 MAP7D2Q96T17 732 aa21.7■■□□□ 1.06
SMARCB1-204ENST00000407422 RGS18Q9NS28 235 aa21.7■■□□□ 1.06
SMARCB1-204ENST00000407422 VAV3Q9UKW4 847 aa21.7■■□□□ 1.06
SMARCB1-204ENST00000407422 LRFN2Q9ULH4 789 aa21.7■■□□□ 1.06
SMARCB1-204ENST00000407422 C5orf42Q9H799 3197 aa21.7■■□□□ 1.06
SMARCB1-204ENST00000407422 RB1P06400 928 aa21.69■■□□□ 1.06
SMARCB1-204ENST00000407422 ST3GAL1Q11201 340 aa21.69■■□□□ 1.06
SMARCB1-204ENST00000407422 DRP2Q13474 957 aa21.69■■□□□ 1.06
SMARCB1-204ENST00000407422 MTERF2Q49AM1 385 aa21.69■■□□□ 1.06
SMARCB1-204ENST00000407422 XKR3Q5GH77 459 aa21.69■■□□□ 1.06
SMARCB1-204ENST00000407422 CMTR2Q8IYT2 770 aaKnown RBP21.69■■□□□ 1.06
SMARCB1-204ENST00000407422 HAS1Q92839 578 aa21.69■■□□□ 1.06
SMARCB1-204ENST00000407422 CEP89Q96ST8 783 aa21.69■■□□□ 1.06
SMARCB1-204ENST00000407422 NIFKQ9BYG3 293 aaKnown RBP21.69■■□□□ 1.06
SMARCB1-204ENST00000407422 RWDD3Q9Y3V2 267 aa21.69■■□□□ 1.06
SMARCB1-204ENST00000407422 C9IYK1 514 aa21.69■■□□□ 1.06
SMARCB1-204ENST00000407422 EIF5BO60841 1220 aaKnown RBP21.69■■□□□ 1.06
SMARCB1-204ENST00000407422 GCFC2P16383 781 aaKnown RBP21.69■■□□□ 1.06
SMARCB1-204ENST00000407422 FOSBP53539 338 aa21.69■■□□□ 1.06
SMARCB1-204ENST00000407422 PPP2R5CQ13362 524 aa21.69■■□□□ 1.06
SMARCB1-204ENST00000407422 ODR4Q5SWX8 454 aa21.69■■□□□ 1.06
SMARCB1-204ENST00000407422 SLC24A5Q71RS6 500 aa21.69■■□□□ 1.06
SMARCB1-204ENST00000407422 TNFRSF25Q93038 417 aa21.69■■□□□ 1.06
SMARCB1-204ENST00000407422 FAM20AQ96MK3 541 aa21.69■■□□□ 1.06
SMARCB1-204ENST00000407422 C11orf84Q9BUA3 381 aaPredicted RBP21.69■■□□□ 1.06
SMARCB1-204ENST00000407422 UBE2ZQ9H832 354 aaPredicted RBP21.69■■□□□ 1.06
SMARCB1-204ENST00000407422 PCDHB7Q9Y5E2 793 aa21.69■■□□□ 1.06
SMARCB1-204ENST00000407422 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.68■■□□□ 1.06
SMARCB1-204ENST00000407422 KRT2P35908 639 aa21.68■■□□□ 1.06
SMARCB1-204ENST00000407422 TIGD5Q53EQ6 642 aa21.68■■□□□ 1.06
SMARCB1-204ENST00000407422 TCEAL5Q5H9L2 206 aa21.68■■□□□ 1.06
SMARCB1-204ENST00000407422 POTEDQ86YR6 584 aa21.68■■□□□ 1.06
SMARCB1-204ENST00000407422 ALG13Q9NP73 1137 aaKnown RBP21.68■■□□□ 1.06
SMARCB1-204ENST00000407422 DDX11L8A8MPP1 907 aa21.67■■□□□ 1.06
SMARCB1-204ENST00000407422 CSPG5O95196 566 aa21.67■■□□□ 1.06
SMARCB1-204ENST00000407422 EIF4BP23588 611 aaKnown RBP21.67■■□□□ 1.06
SMARCB1-204ENST00000407422 GPC3P51654 580 aa21.67■■□□□ 1.06
SMARCB1-204ENST00000407422 DSC3Q14574 896 aa21.67■■□□□ 1.06
SMARCB1-204ENST00000407422 FAM102BQ5T8I3 360 aa21.67■■□□□ 1.06
SMARCB1-204ENST00000407422 ANO5Q75V66 913 aa21.67■■□□□ 1.06
SMARCB1-204ENST00000407422 C1orf112Q9NSG2 853 aa21.67■■□□□ 1.06
SMARCB1-204ENST00000407422 KCNA5P22460 613 aa21.66■■□□□ 1.06
SMARCB1-204ENST00000407422 PSMC5P62195 406 aa21.66■■□□□ 1.06
SMARCB1-204ENST00000407422 PLA2G4FQ68DD2 849 aa21.66■■□□□ 1.06
SMARCB1-204ENST00000407422 NSUN3Q9H649 340 aaKnown RBP21.66■■□□□ 1.06
SMARCB1-204ENST00000407422 WRAP73Q9P2S5 460 aaPredicted RBP21.66■■□□□ 1.06
SMARCB1-204ENST00000407422 BTBD18B2RXH4 712 aa21.66■■□□□ 1.06
SMARCB1-204ENST00000407422 CSDE1O75534 798 aaKnown RBP21.66■■□□□ 1.06
SMARCB1-204ENST00000407422 FGFR4P22455 802 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms