RNA–Protein interactions for RNA: ENST00000406256.7

GDPD3-202, Transcript of glycerophosphodiester phosphodiesterase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GDPD3, Length 1,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD3-202ENST00000406256 FBXO47Q5MNV8 452 aa17.76■□□□□ 0.43
GDPD3-202ENST00000406256 EFCAB12Q6NXP0 572 aa17.76■□□□□ 0.43
GDPD3-202ENST00000406256 PSRC1Q6PGN9 363 aaPredicted RBP17.76■□□□□ 0.43
GDPD3-202ENST00000406256 LRRC15Q8TF66 581 aa17.76■□□□□ 0.43
GDPD3-202ENST00000406256 HERVK_113Q902F9 699 aa17.76■□□□□ 0.43
GDPD3-202ENST00000406256 ANKEF1Q9NU02 776 aa17.76■□□□□ 0.43
GDPD3-202ENST00000406256 TTC3P53804 2025 aa17.75■□□□□ 0.43
GDPD3-202ENST00000406256 VTNP04004 478 aa17.75■□□□□ 0.43
GDPD3-202ENST00000406256 MUTP22033 750 aa17.75■□□□□ 0.43
GDPD3-202ENST00000406256 HYIQ5T013 277 aa17.75■□□□□ 0.43
GDPD3-202ENST00000406256 KCNK18Q7Z418 384 aa17.75■□□□□ 0.43
GDPD3-202ENST00000406256 NME8Q8N427 588 aa17.75■□□□□ 0.43
GDPD3-202ENST00000406256 SNX29Q8TEQ0 813 aa17.75■□□□□ 0.43
GDPD3-202ENST00000406256 TMEM40Q8WWA1 233 aa17.75■□□□□ 0.43
GDPD3-202ENST00000406256 CEP170P1Q96L14 293 aa17.75■□□□□ 0.43
GDPD3-202ENST00000406256 PNMA5Q96PV4 448 aa17.75■□□□□ 0.43
GDPD3-202ENST00000406256 AGO3Q9H9G7 860 aaKnown RBP17.75■□□□□ 0.43
GDPD3-202ENST00000406256 PPME1Q9Y570 386 aa17.75■□□□□ 0.43
GDPD3-202ENST00000406256 TRPV2Q9Y5S1 764 aa17.75■□□□□ 0.43
GDPD3-202ENST00000406256 MYH11P35749 1972 aa17.74■□□□□ 0.43
GDPD3-202ENST00000406256 SOX1O00570 391 aaPredicted RBP17.74■□□□□ 0.43
GDPD3-202ENST00000406256 FGBP02675 491 aa17.74■□□□□ 0.43
GDPD3-202ENST00000406256 RPLP2P05387 115 aaKnown RBP17.74■□□□□ 0.43
GDPD3-202ENST00000406256 XRCC6P12956 609 aaKnown RBP eCLIP17.74■□□□□ 0.43
GDPD3-202ENST00000406256 MARCKSP29966 332 aaPredicted RBP17.74■□□□□ 0.43
GDPD3-202ENST00000406256 CCT6AP40227 531 aaKnown RBP17.74■□□□□ 0.43
GDPD3-202ENST00000406256 CEBPZQ03701 1054 aaKnown RBP17.74■□□□□ 0.43
GDPD3-202ENST00000406256 GRB10Q13322 594 aa17.74■□□□□ 0.43
GDPD3-202ENST00000406256 SLC39A14Q15043 492 aa17.74■□□□□ 0.43
GDPD3-202ENST00000406256 XKR9Q5GH70 373 aa17.74■□□□□ 0.43
GDPD3-202ENST00000406256 HAUS3Q68CZ6 603 aa17.74■□□□□ 0.43
GDPD3-202ENST00000406256 FAM109BQ6ICB4 259 aaPredicted RBP17.74■□□□□ 0.43
GDPD3-202ENST00000406256 RSPH3Q86UC2 560 aa17.74■□□□□ 0.43
GDPD3-202ENST00000406256 RPUSD2Q8IZ73 545 aaKnown RBP17.74■□□□□ 0.43
GDPD3-202ENST00000406256 METTL13Q8N6R0 699 aa17.74■□□□□ 0.43
GDPD3-202ENST00000406256 LINC00301Q8NCQ3 95 aa17.74■□□□□ 0.43
GDPD3-202ENST00000406256 DBF4BQ8NFT6 615 aa17.74■□□□□ 0.43
GDPD3-202ENST00000406256 ERMNQ8TAM6 284 aa17.74■□□□□ 0.43
GDPD3-202ENST00000406256 CHAMP1Q96JM3 812 aa17.74■□□□□ 0.43
GDPD3-202ENST00000406256 CELF4Q9BZC1 486 aaKnown RBP17.74■□□□□ 0.43
GDPD3-202ENST00000406256 ADAMTS10Q9H324 1103 aa17.74■□□□□ 0.43
GDPD3-202ENST00000406256 DBR1Q9UK59 544 aaKnown RBP17.74■□□□□ 0.43
GDPD3-202ENST00000406256 GHRP10912 638 aa17.73■□□□□ 0.43
GDPD3-202ENST00000406256 EMC2Q15006 297 aa17.73■□□□□ 0.43
GDPD3-202ENST00000406256 LRIT3Q3SXY7 679 aa17.73■□□□□ 0.43
GDPD3-202ENST00000406256 CNKSR3Q6P9H4 555 aa17.73■□□□□ 0.43
GDPD3-202ENST00000406256 USP49Q70CQ1 688 aa17.73■□□□□ 0.43
GDPD3-202ENST00000406256 OTUD6AQ7L8S5 288 aa17.73■□□□□ 0.43
GDPD3-202ENST00000406256 OTOP2Q7RTS6 562 aa17.73■□□□□ 0.43
GDPD3-202ENST00000406256 CLIC6Q96NY7 704 aa17.73■□□□□ 0.43
GDPD3-202ENST00000406256 PPP1R16BQ96T49 567 aa17.73■□□□□ 0.43
GDPD3-202ENST00000406256 RAB34Q9BZG1 259 aa17.73■□□□□ 0.43
GDPD3-202ENST00000406256 SUGCTQ9HAC7 445 aa17.73■□□□□ 0.43
GDPD3-202ENST00000406256 BMP2KQ9NSY1 1161 aaPredicted RBP17.73■□□□□ 0.43
GDPD3-202ENST00000406256 TFIP11Q9UBB9 837 aaKnown RBP17.73■□□□□ 0.43
GDPD3-202ENST00000406256 SRPRBQ9Y5M8 271 aaKnown RBP17.73■□□□□ 0.43
GDPD3-202ENST00000406256 RFC5P40937 340 aa17.72■□□□□ 0.43
GDPD3-202ENST00000406256 GPC3P51654 580 aa17.72■□□□□ 0.43
GDPD3-202ENST00000406256 KIZQ2M2Z5 673 aa17.72■□□□□ 0.43
GDPD3-202ENST00000406256 TMEM119Q4V9L6 283 aa17.72■□□□□ 0.43
GDPD3-202ENST00000406256 IER5Q5VY09 327 aa17.72■□□□□ 0.43
GDPD3-202ENST00000406256 RNPC3Q96LT9 517 aaKnown RBP17.72■□□□□ 0.43
GDPD3-202ENST00000406256 AK8Q96MA6 479 aa17.72■□□□□ 0.43
GDPD3-202ENST00000406256 NACC1Q96RE7 527 aa17.72■□□□□ 0.43
GDPD3-202ENST00000406256 DDX19AQ9NUU7 478 aaKnown RBP17.72■□□□□ 0.43
GDPD3-202ENST00000406256 KIAA1024Q9UPX6 916 aa17.72■□□□□ 0.43
GDPD3-202ENST00000406256 SQORQ9Y6N5 450 aa17.72■□□□□ 0.43
GDPD3-202ENST00000406256 COL4A6Q14031 1691 aa17.72■□□□□ 0.43
GDPD3-202ENST00000406256 TRANK1O15050 2925 aa17.72■□□□□ 0.43
GDPD3-202ENST00000406256 E9PMD0 336 aa17.71■□□□□ 0.43
GDPD3-202ENST00000406256 LONP1P36776 959 aaKnown RBP17.71■□□□□ 0.43
GDPD3-202ENST00000406256 NLRP11P59045 1033 aaKnown RBP17.71■□□□□ 0.43
GDPD3-202ENST00000406256 FOXD4L6Q3SYB3 417 aaPredicted RBP17.71■□□□□ 0.43
GDPD3-202ENST00000406256 KRT79Q5XKE5 535 aa17.71■□□□□ 0.43
GDPD3-202ENST00000406256 FOXD4L3Q6VB84 417 aaPredicted RBP17.71■□□□□ 0.43
GDPD3-202ENST00000406256 TSHZ1Q6ZSZ6 1077 aa17.71■□□□□ 0.43
GDPD3-202ENST00000406256 LINC01599Q8WXQ3 324 aa17.71■□□□□ 0.43
GDPD3-202ENST00000406256 TMEM143Q96AN5 459 aa17.71■□□□□ 0.43
GDPD3-202ENST00000406256 ZNF668Q96K58 619 aaPredicted RBP17.71■□□□□ 0.43
GDPD3-202ENST00000406256 OSMRQ99650 979 aa17.71■□□□□ 0.43
GDPD3-202ENST00000406256 CSRNP2Q9H175 543 aa17.71■□□□□ 0.43
GDPD3-202ENST00000406256 AKT3Q9Y243 479 aa17.71■□□□□ 0.43
GDPD3-202ENST00000406256 YEATS4O95619 227 aa17.7■□□□□ 0.42
GDPD3-202ENST00000406256 CD52P31358 61 aa17.7■□□□□ 0.42
GDPD3-202ENST00000406256 POLGP54098 1239 aaPredicted RBP17.7■□□□□ 0.42
GDPD3-202ENST00000406256 WDR5P61964 334 aaKnown RBP17.7■□□□□ 0.42
GDPD3-202ENST00000406256 DNM1Q05193 864 aaKnown RBP17.7■□□□□ 0.42
GDPD3-202ENST00000406256 SPECC1Q5M775 1068 aa17.7■□□□□ 0.42
GDPD3-202ENST00000406256 KSR1Q8IVT5 923 aa17.7■□□□□ 0.42
GDPD3-202ENST00000406256 SLC7A3Q8WY07 619 aa17.7■□□□□ 0.42
GDPD3-202ENST00000406256 MAP7D2Q96T17 732 aa17.7■□□□□ 0.42
GDPD3-202ENST00000406256 IFIH1Q9BYX4 1025 aaKnown RBP17.7■□□□□ 0.42
GDPD3-202ENST00000406256 TMX1Q9H3N1 280 aa17.7■□□□□ 0.42
GDPD3-202ENST00000406256 SUCLA2Q9P2R7 463 aaPredicted RBP17.7■□□□□ 0.42
GDPD3-202ENST00000406256 NOC2LQ9Y3T9 749 aaKnown RBP17.7■□□□□ 0.42
GDPD3-202ENST00000406256 STK24Q9Y6E0 443 aa17.7■□□□□ 0.42
GDPD3-202ENST00000406256 MYO9BQ13459 2157 aa17.7■□□□□ 0.42
GDPD3-202ENST00000406256 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.69■□□□□ 0.42
GDPD3-202ENST00000406256 DGAT1O75907 488 aa17.69■□□□□ 0.42
GDPD3-202ENST00000406256 BAIAP3O94812 1187 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms