RNA–Protein interactions for RNA: ENST00000405546.7

ATG4B-206, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2 BASIC

Gene ATG4B, Length 3,294 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-206ENST00000405546 STAMBPL1Q96FJ0 436 aa16.36■□□□□ 0.21
ATG4B-206ENST00000405546 ATP6V1G3Q96LB4 118 aa16.36■□□□□ 0.21
ATG4B-206ENST00000405546 RABGAP1Q9Y3P9 1069 aa16.36■□□□□ 0.21
ATG4B-206ENST00000405546 IGKV6D-41A0A0C4DH26 115 aa16.36■□□□□ 0.21
ATG4B-206ENST00000405546 TLDC2A0PJX2 215 aa16.36■□□□□ 0.21
ATG4B-206ENST00000405546 MEIS2O14770 477 aa16.36■□□□□ 0.21
ATG4B-206ENST00000405546 KIF1CO43896 1103 aaKnown RBP16.36■□□□□ 0.21
ATG4B-206ENST00000405546 RASSF9O75901 435 aa16.36■□□□□ 0.21
ATG4B-206ENST00000405546 USP11P51784 963 aa16.36■□□□□ 0.21
ATG4B-206ENST00000405546 CDK17Q00537 523 aa16.36■□□□□ 0.21
ATG4B-206ENST00000405546 FAM133BQ5BKY9 247 aaKnown RBP16.36■□□□□ 0.21
ATG4B-206ENST00000405546 HHIPL2Q6UWX4 724 aa16.36■□□□□ 0.21
ATG4B-206ENST00000405546 MIGA2Q7L4E1 593 aa16.36■□□□□ 0.21
ATG4B-206ENST00000405546 SYCP3Q8IZU3 236 aa16.36■□□□□ 0.21
ATG4B-206ENST00000405546 NAP1L4Q99733 375 aaKnown RBP16.36■□□□□ 0.21
ATG4B-206ENST00000405546 SH2D3AQ9BRG2 576 aa16.36■□□□□ 0.21
ATG4B-206ENST00000405546 ECE2O60344 883 aa16.35■□□□□ 0.21
ATG4B-206ENST00000405546 ABCB4P21439 1286 aa16.35■□□□□ 0.21
ATG4B-206ENST00000405546 NMT1P30419 496 aaKnown RBP16.35■□□□□ 0.21
ATG4B-206ENST00000405546 ECE1P42892 770 aa16.35■□□□□ 0.21
ATG4B-206ENST00000405546 CCNHP51946 323 aaPredicted RBP16.35■□□□□ 0.21
ATG4B-206ENST00000405546 ZC2HC1CQ53FD0 456 aaPredicted RBP16.35■□□□□ 0.21
ATG4B-206ENST00000405546 KDM7AQ6ZMT4 941 aa16.35■□□□□ 0.21
ATG4B-206ENST00000405546 TBC1D1Q86TI0 1168 aaPredicted RBP16.35■□□□□ 0.21
ATG4B-206ENST00000405546 COL23A1Q86Y22 540 aaPredicted RBP16.35■□□□□ 0.21
ATG4B-206ENST00000405546 IQCKQ8N0W5 287 aa16.35■□□□□ 0.21
ATG4B-206ENST00000405546 FAXDC2Q96IV6 333 aa16.35■□□□□ 0.21
ATG4B-206ENST00000405546 GLT8D2Q9H1C3 349 aa16.35■□□□□ 0.21
ATG4B-206ENST00000405546 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.35■□□□□ 0.21
ATG4B-206ENST00000405546 CNOT8Q9UFF9 292 aaKnown RBP16.35■□□□□ 0.21
ATG4B-206ENST00000405546 RAD51CO43502 376 aa16.35■□□□□ 0.21
ATG4B-206ENST00000405546 NOL4O94818 638 aa16.35■□□□□ 0.21
ATG4B-206ENST00000405546 EPB41P11171 864 aaKnown RBP16.35■□□□□ 0.21
ATG4B-206ENST00000405546 GCKP35557 465 aa16.35■□□□□ 0.21
ATG4B-206ENST00000405546 FLT3P36888 993 aa16.35■□□□□ 0.21
ATG4B-206ENST00000405546 PTK2Q05397 1052 aa16.35■□□□□ 0.21
ATG4B-206ENST00000405546 KNOP1Q1ED39 458 aaKnown RBP16.35■□□□□ 0.21
ATG4B-206ENST00000405546 KLHDC7AQ5VTJ3 777 aa16.35■□□□□ 0.21
ATG4B-206ENST00000405546 CLSTN1O94985 981 aa16.34■□□□□ 0.21
ATG4B-206ENST00000405546 AFPP02771 609 aaKnown RBP16.34■□□□□ 0.21
ATG4B-206ENST00000405546 CTNNA1P35221 906 aaKnown RBP16.34■□□□□ 0.21
ATG4B-206ENST00000405546 CLK2P49760 499 aaKnown RBP16.34■□□□□ 0.21
ATG4B-206ENST00000405546 ARHGAP44Q17R89 818 aa16.34■□□□□ 0.21
ATG4B-206ENST00000405546 PODNQ7Z5L7 613 aa16.34■□□□□ 0.21
ATG4B-206ENST00000405546 TRIM59Q8IWR1 403 aa16.34■□□□□ 0.21
ATG4B-206ENST00000405546 U2AF1L4Q8WU68 220 aaKnown RBP16.34■□□□□ 0.21
ATG4B-206ENST00000405546 CEP63Q96MT8 703 aa16.34■□□□□ 0.21
ATG4B-206ENST00000405546 P2RX7Q99572 595 aaKnown RBP16.34■□□□□ 0.21
ATG4B-206ENST00000405546 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.34■□□□□ 0.21
ATG4B-206ENST00000405546 FAM198AQ9UFP1 575 aa16.34■□□□□ 0.21
ATG4B-206ENST00000405546 KIAA1551Q9HCM1 1747 aa16.34■□□□□ 0.21
ATG4B-206ENST00000405546 TNRC6CQ9HCJ0 1690 aaKnown RBP16.34■□□□□ 0.21
ATG4B-206ENST00000405546 CALUO43852 315 aaPredicted RBP16.34■□□□□ 0.21
ATG4B-206ENST00000405546 GFPT2O94808 682 aa16.34■□□□□ 0.21
ATG4B-206ENST00000405546 FAM107AO95990 144 aa16.34■□□□□ 0.21
ATG4B-206ENST00000405546 GIT2Q14161 759 aa16.34■□□□□ 0.21
ATG4B-206ENST00000405546 RPS6KA1Q15418 735 aa16.34■□□□□ 0.21
ATG4B-206ENST00000405546 HGSNATQ68CP4 663 aa16.34■□□□□ 0.21
ATG4B-206ENST00000405546 ZNF526Q8TF50 670 aaPredicted RBP16.34■□□□□ 0.21
ATG4B-206ENST00000405546 NUCKS1Q9H1E3 243 aaKnown RBP16.34■□□□□ 0.21
ATG4B-206ENST00000405546 DPH5Q9H2P9 285 aa16.34■□□□□ 0.21
ATG4B-206ENST00000405546 TMOD2Q9NZR1 351 aa16.34■□□□□ 0.21
ATG4B-206ENST00000405546 EME2A4GXA9 379 aaPredicted RBP16.34■□□□□ 0.21
ATG4B-206ENST00000405546 H0YIN7 160 aa16.34■□□□□ 0.21
ATG4B-206ENST00000405546 MSH4O15457 936 aa16.34■□□□□ 0.21
ATG4B-206ENST00000405546 BUB1BO60566 1050 aaPredicted RBP16.34■□□□□ 0.21
ATG4B-206ENST00000405546 PAK2Q13177 524 aa16.34■□□□□ 0.21
ATG4B-206ENST00000405546 TMEM179Q6ZVK1 233 aa16.34■□□□□ 0.21
ATG4B-206ENST00000405546 SEC16BQ96JE7 1060 aa16.34■□□□□ 0.21
ATG4B-206ENST00000405546 RUSC1Q9BVN2 902 aa16.34■□□□□ 0.21
ATG4B-206ENST00000405546 RPL13P26373 211 aaKnown RBP16.33■□□□□ 0.2
ATG4B-206ENST00000405546 HNRNPH3P31942 346 aaKnown RBP16.33■□□□□ 0.2
ATG4B-206ENST00000405546 SCTRP47872 440 aa16.33■□□□□ 0.2
ATG4B-206ENST00000405546 SATB1Q01826 763 aa16.33■□□□□ 0.2
ATG4B-206ENST00000405546 SLC18A3Q16572 532 aa16.33■□□□□ 0.2
ATG4B-206ENST00000405546 DCAF4Q8WV16 495 aa16.33■□□□□ 0.2
ATG4B-206ENST00000405546 MASTLQ96GX5 879 aa16.33■□□□□ 0.2
ATG4B-206ENST00000405546 EIF2AK1Q9BQI3 630 aaKnown RBP16.33■□□□□ 0.2
ATG4B-206ENST00000405546 TRIM6Q9C030 488 aaPredicted RBP16.33■□□□□ 0.2
ATG4B-206ENST00000405546 GCNT4Q9P109 453 aa16.33■□□□□ 0.2
ATG4B-206ENST00000405546 SUGT1Q9Y2Z0 365 aa16.33■□□□□ 0.2
ATG4B-206ENST00000405546 GMNCA6NCL1 334 aa16.33■□□□□ 0.2
ATG4B-206ENST00000405546 GCOM1H8Y6P7 765 aaPredicted RBP16.33■□□□□ 0.2
ATG4B-206ENST00000405546 AKAP3O75969 853 aa16.33■□□□□ 0.2
ATG4B-206ENST00000405546 NR3C1P04150 777 aa16.33■□□□□ 0.2
ATG4B-206ENST00000405546 MYZAPP0CAP1 466 aa16.33■□□□□ 0.2
ATG4B-206ENST00000405546 UCHL3P15374 230 aa16.33■□□□□ 0.2
ATG4B-206ENST00000405546 MAGOHP61326 146 aaKnown RBP16.33■□□□□ 0.2
ATG4B-206ENST00000405546 ITGB3BPQ13352 177 aaPredicted RBP16.33■□□□□ 0.2
ATG4B-206ENST00000405546 ALKBH5Q6P6C2 394 aaKnown RBP16.33■□□□□ 0.2
ATG4B-206ENST00000405546 VPS36Q86VN1 386 aa16.33■□□□□ 0.2
ATG4B-206ENST00000405546 MAGOHBQ96A72 148 aaKnown RBP16.33■□□□□ 0.2
ATG4B-206ENST00000405546 PRMT6Q96LA8 375 aaPredicted RBP16.33■□□□□ 0.2
ATG4B-206ENST00000405546 SSU72P8A0A1W2PR75 194 aa16.32■□□□□ 0.2
ATG4B-206ENST00000405546 EML1O00423 815 aa16.32■□□□□ 0.2
ATG4B-206ENST00000405546 RAD17O75943 681 aa16.32■□□□□ 0.2
ATG4B-206ENST00000405546 IFNAR2P48551 515 aa16.32■□□□□ 0.2
ATG4B-206ENST00000405546 SH3BP5LQ7L8J4 393 aa16.32■□□□□ 0.2
ATG4B-206ENST00000405546 HVCN1Q96D96 273 aa16.32■□□□□ 0.2
ATG4B-206ENST00000405546 DYDC2Q96IM9 177 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms