RNA–Protein interactions for RNA: ENST00000405240.5

RTN4-209, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,061 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-209ENST00000405240 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.22□□□□□ -1.73
RTN4-209ENST00000405240 CAPS2Q9BXY5 557 aa4.22□□□□□ -1.73
RTN4-209ENST00000405240 ST6GALNAC4Q9H4F1 302 aa4.22□□□□□ -1.73
RTN4-209ENST00000405240 SLITRK6Q9H5Y7 841 aa4.22□□□□□ -1.73
RTN4-209ENST00000405240 BCAS3Q9H6U6 928 aa4.22□□□□□ -1.73
RTN4-209ENST00000405240 TBC1D7Q9P0N9 293 aa4.22□□□□□ -1.73
RTN4-209ENST00000405240 ADAMTS1Q9UHI8 967 aa4.22□□□□□ -1.73
RTN4-209ENST00000405240 PCDHA3Q9Y5H8 950 aa4.22□□□□□ -1.73
RTN4-209ENST00000405240 PAPPA2Q9BXP8 1791 aa4.22□□□□□ -1.73
RTN4-209ENST00000405240 KIAA1217Q5T5P2 1943 aa4.22□□□□□ -1.73
RTN4-209ENST00000405240 WDR90Q96KV7 1748 aa4.22□□□□□ -1.73
RTN4-209ENST00000405240 F8VZ95 297 aa4.22□□□□□ -1.73
RTN4-209ENST00000405240 RIMBP2O15034 1052 aa4.22□□□□□ -1.73
RTN4-209ENST00000405240 PLSCR1O15162 318 aa4.22□□□□□ -1.73
RTN4-209ENST00000405240 TBC1D12O60347 775 aa4.22□□□□□ -1.73
RTN4-209ENST00000405240 HEXIM1O94992 359 aaKnown RBP4.22□□□□□ -1.73
RTN4-209ENST00000405240 FTCDO95954 541 aa4.22□□□□□ -1.73
RTN4-209ENST00000405240 MYCNP04198 464 aaPredicted RBP4.22□□□□□ -1.73
RTN4-209ENST00000405240 BCRP11274 1271 aa4.22□□□□□ -1.73
RTN4-209ENST00000405240 RPL13P26373 211 aaKnown RBP4.22□□□□□ -1.73
RTN4-209ENST00000405240 NOP2P46087 812 aaKnown RBP4.22□□□□□ -1.73
RTN4-209ENST00000405240 CASP4P49662 377 aa4.22□□□□□ -1.73
RTN4-209ENST00000405240 SCNN1DP51172 638 aa4.22□□□□□ -1.73
RTN4-209ENST00000405240 CACNB1Q02641 598 aaPredicted RBP4.22□□□□□ -1.73
RTN4-209ENST00000405240 ENPEPQ07075 957 aa4.22□□□□□ -1.73
RTN4-209ENST00000405240 TRADDQ15628 312 aa4.22□□□□□ -1.73
RTN4-209ENST00000405240 IFI16Q16666 785 aaKnown RBP4.22□□□□□ -1.73
RTN4-209ENST00000405240 PRR16Q569H4 304 aa4.22□□□□□ -1.73
RTN4-209ENST00000405240 DCAF12L1Q5VU92 463 aa4.22□□□□□ -1.73
RTN4-209ENST00000405240 NIPA1Q7RTP0 329 aa4.22□□□□□ -1.73
RTN4-209ENST00000405240 COL23A1Q86Y22 540 aaPredicted RBP4.22□□□□□ -1.73
RTN4-209ENST00000405240 NLGN1Q8N2Q7 840 aa4.22□□□□□ -1.73
RTN4-209ENST00000405240 METTL13Q8N6R0 699 aa4.22□□□□□ -1.73
RTN4-209ENST00000405240 ATP8B4Q8TF62 1192 aa4.22□□□□□ -1.73
RTN4-209ENST00000405240 WRAP73Q9P2S5 460 aaPredicted RBP4.22□□□□□ -1.73
RTN4-209ENST00000405240 TRPC5Q9UL62 973 aaPredicted RBP4.22□□□□□ -1.73
RTN4-209ENST00000405240 PRR12Q9ULL5 1215 aa4.22□□□□□ -1.73
RTN4-209ENST00000405240 TMX2Q9Y320 296 aa4.22□□□□□ -1.73
RTN4-209ENST00000405240 A0A0G2JMZ2 1700 aa4.22□□□□□ -1.73
RTN4-209ENST00000405240 LRRC37A2A6NM11 1700 aa4.22□□□□□ -1.73
RTN4-209ENST00000405240 AFF2P51816 1311 aa4.22□□□□□ -1.73
RTN4-209ENST00000405240 ZSCAN5CA6NGD5 496 aaPredicted RBP4.21□□□□□ -1.73
RTN4-209ENST00000405240 MEIS1O00470 390 aa4.21□□□□□ -1.73
RTN4-209ENST00000405240 TRIM66O15016 1216 aa4.21□□□□□ -1.73
RTN4-209ENST00000405240 P4HA2O15460 535 aa4.21□□□□□ -1.73
RTN4-209ENST00000405240 PHACTR2O75167 634 aa4.21□□□□□ -1.73
RTN4-209ENST00000405240 LYPLA2O95372 231 aa4.21□□□□□ -1.73
RTN4-209ENST00000405240 BMP3P12645 472 aa4.21□□□□□ -1.73
RTN4-209ENST00000405240 XRCC5P13010 732 aaKnown RBP4.21□□□□□ -1.73
RTN4-209ENST00000405240 ALAS1P13196 640 aa4.21□□□□□ -1.73
RTN4-209ENST00000405240 SOX5P35711 763 aa4.21□□□□□ -1.73
RTN4-209ENST00000405240 HSD17B4P51659 736 aa4.21□□□□□ -1.73
RTN4-209ENST00000405240 DRG2P55039 364 aaKnown RBP4.21□□□□□ -1.73
RTN4-209ENST00000405240 SNRPFP62306 86 aaKnown RBP4.21□□□□□ -1.73
RTN4-209ENST00000405240 ICA1Q05084 483 aa4.21□□□□□ -1.73
RTN4-209ENST00000405240 KCNA1Q09470 495 aa4.21□□□□□ -1.73
RTN4-209ENST00000405240 RAPGEF1Q13905 1077 aa4.21□□□□□ -1.73
RTN4-209ENST00000405240 PLS1Q14651 629 aa4.21□□□□□ -1.73
RTN4-209ENST00000405240 DOK7Q18PE1 504 aa4.21□□□□□ -1.73
RTN4-209ENST00000405240 ABCB5Q2M3G0 1257 aa4.21□□□□□ -1.73
RTN4-209ENST00000405240 TNFAIP8L3Q5GJ75 292 aa4.21□□□□□ -1.73
RTN4-209ENST00000405240 C1orf220Q5T0J3 134 aa4.21□□□□□ -1.73
RTN4-209ENST00000405240 ALKBH5Q6P6C2 394 aaKnown RBP4.21□□□□□ -1.73
RTN4-209ENST00000405240 C6orf89Q6UWU4 347 aa4.21□□□□□ -1.73
RTN4-209ENST00000405240 FMNL3Q8IVF7 1028 aa4.21□□□□□ -1.73
RTN4-209ENST00000405240 CYP2W1Q8TAV3 490 aa4.21□□□□□ -1.73
RTN4-209ENST00000405240 ATP6V1G3Q96LB4 118 aa4.21□□□□□ -1.73
RTN4-209ENST00000405240 NEUROG2Q9H2A3 272 aa4.21□□□□□ -1.73
RTN4-209ENST00000405240 RASSF4Q9H2L5 321 aa4.21□□□□□ -1.73
RTN4-209ENST00000405240 EPB41L4BQ9H329 900 aa4.21□□□□□ -1.73
RTN4-209ENST00000405240 EPB41L5Q9HCM4 733 aa4.21□□□□□ -1.73
RTN4-209ENST00000405240 NFU1Q9UMS0 254 aa4.21□□□□□ -1.73
RTN4-209ENST00000405240 RABGAP1Q9Y3P9 1069 aa4.21□□□□□ -1.73
RTN4-209ENST00000405240 C5orf60A6NFR6 353 aa4.21□□□□□ -1.74
RTN4-209ENST00000405240 HMGB1P1B2RPK0 211 aaPredicted RBP4.21□□□□□ -1.74
RTN4-209ENST00000405240 HSF2BPO75031 334 aa4.21□□□□□ -1.74
RTN4-209ENST00000405240 PPFIA2O75334 1257 aa4.21□□□□□ -1.74
RTN4-209ENST00000405240 PSMC2P35998 433 aaKnown RBP4.21□□□□□ -1.74
RTN4-209ENST00000405240 FMO5P49326 533 aa4.21□□□□□ -1.74
RTN4-209ENST00000405240 TNNC1P63316 161 aa4.21□□□□□ -1.74
RTN4-209ENST00000405240 TRAF1Q13077 416 aa4.21□□□□□ -1.74
RTN4-209ENST00000405240 PABPC4Q13310 644 aaKnown RBP eCLIP4.21□□□□□ -1.742e-7■■■□□ 16.8
RTN4-209ENST00000405240 RPS6KA1Q15418 735 aa4.21□□□□□ -1.74
RTN4-209ENST00000405240 CCDC181Q5TID7 509 aa4.21□□□□□ -1.74
RTN4-209ENST00000405240 AGBL2Q5U5Z8 902 aa4.21□□□□□ -1.74
RTN4-209ENST00000405240 SPATS2Q86XZ4 545 aaKnown RBP4.21□□□□□ -1.74
RTN4-209ENST00000405240 SYCE1Q8N0S2 351 aa4.21□□□□□ -1.74
RTN4-209ENST00000405240 DAW1Q8N136 415 aa4.21□□□□□ -1.74
RTN4-209ENST00000405240 VTI1AQ96AJ9 217 aa4.21□□□□□ -1.74
RTN4-209ENST00000405240 ZBED3Q96IU2 234 aaPredicted RBP4.21□□□□□ -1.74
RTN4-209ENST00000405240 GMLQ99445 158 aa4.21□□□□□ -1.74
RTN4-209ENST00000405240 KRT12Q99456 494 aa4.21□□□□□ -1.74
RTN4-209ENST00000405240 TANGO6Q9C0B7 1094 aa4.21□□□□□ -1.74
RTN4-209ENST00000405240 ZDHHC18Q9NUE0 388 aa4.21□□□□□ -1.74
RTN4-209ENST00000405240 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.21□□□□□ -1.74
RTN4-209ENST00000405240 SLC12A6Q9UHW9 1150 aa4.21□□□□□ -1.74
RTN4-209ENST00000405240 HERC5Q9UII4 1024 aaKnown RBP4.21□□□□□ -1.74
RTN4-209ENST00000405240 DBR1Q9UK59 544 aaKnown RBP4.21□□□□□ -1.74
RTN4-209ENST00000405240 SHTN1A0MZ66 631 aa4.21□□□□□ -1.74
RTN4-209ENST00000405240 DHX15O43143 795 aaKnown RBP4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms