RNA–Protein interactions for RNA: ENST00000404583.5

CDPF1-203, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CDPF1, Length 1,439 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-203ENST00000404583 POTEGQ6S5H5 508 aa16.29■□□□□ 0.2
CDPF1-203ENST00000404583 SNX29Q8TEQ0 813 aa16.29■□□□□ 0.2
CDPF1-203ENST00000404583 HERVK_113Q902F9 699 aa16.29■□□□□ 0.2
CDPF1-203ENST00000404583 USP28Q96RU2 1077 aa16.29■□□□□ 0.2
CDPF1-203ENST00000404583 CELF4Q9BZC1 486 aaKnown RBP16.29■□□□□ 0.2
CDPF1-203ENST00000404583 CDHR5Q9HBB8 845 aa16.29■□□□□ 0.2
CDPF1-203ENST00000404583 CXXC1Q9P0U4 656 aaPredicted RBP16.29■□□□□ 0.2
CDPF1-203ENST00000404583 AKT3Q9Y243 479 aa16.29■□□□□ 0.2
CDPF1-203ENST00000404583 GINS2Q9Y248 185 aa16.29■□□□□ 0.2
CDPF1-203ENST00000404583 TRPV2Q9Y5S1 764 aa16.29■□□□□ 0.2
CDPF1-203ENST00000404583 IGKV6-21A0A0C4DH24 114 aa16.28■□□□□ 0.2
CDPF1-203ENST00000404583 GHRP10912 638 aa16.28■□□□□ 0.2
CDPF1-203ENST00000404583 GRIN1Q05586 938 aa16.28■□□□□ 0.2
CDPF1-203ENST00000404583 MKRN4PQ13434 485 aaPredicted RBP16.28■□□□□ 0.2
CDPF1-203ENST00000404583 FOXD4L6Q3SYB3 417 aaPredicted RBP16.28■□□□□ 0.2
CDPF1-203ENST00000404583 RASIP1Q5U651 963 aa16.28■□□□□ 0.2
CDPF1-203ENST00000404583 CNKSR3Q6P9H4 555 aa16.28■□□□□ 0.2
CDPF1-203ENST00000404583 FOXD4L3Q6VB84 417 aaPredicted RBP16.28■□□□□ 0.2
CDPF1-203ENST00000404583 DBF4BQ8NFT6 615 aa16.28■□□□□ 0.2
CDPF1-203ENST00000404583 BMP2KQ9NSY1 1161 aaPredicted RBP16.28■□□□□ 0.2
CDPF1-203ENST00000404583 ANKEF1Q9NU02 776 aa16.28■□□□□ 0.2
CDPF1-203ENST00000404583 ZBBXA8MT70 800 aa16.28■□□□□ 0.2
CDPF1-203ENST00000404583 GPR32O75388 356 aa16.28■□□□□ 0.2
CDPF1-203ENST00000404583 ACTN1P12814 892 aa16.28■□□□□ 0.2
CDPF1-203ENST00000404583 XRCC6P12956 609 aaKnown RBP eCLIP16.28■□□□□ 0.2
CDPF1-203ENST00000404583 MARCKSP29966 332 aaPredicted RBP16.28■□□□□ 0.2
CDPF1-203ENST00000404583 RARRES1P49788 294 aa16.28■□□□□ 0.2
CDPF1-203ENST00000404583 POLGP54098 1239 aaPredicted RBP16.28■□□□□ 0.2
CDPF1-203ENST00000404583 LPIN1Q14693 890 aa16.28■□□□□ 0.2
CDPF1-203ENST00000404583 KIZQ2M2Z5 673 aa16.28■□□□□ 0.2
CDPF1-203ENST00000404583 PLEKHG4Q58EX7 1191 aa16.28■□□□□ 0.2
CDPF1-203ENST00000404583 FBXO47Q5MNV8 452 aa16.28■□□□□ 0.2
CDPF1-203ENST00000404583 KRT79Q5XKE5 535 aa16.28■□□□□ 0.2
CDPF1-203ENST00000404583 PIAS4Q8N2W9 510 aaPredicted RBP16.28■□□□□ 0.2
CDPF1-203ENST00000404583 ZNF668Q96K58 619 aaPredicted RBP16.28■□□□□ 0.2
CDPF1-203ENST00000404583 NACC1Q96RE7 527 aa16.28■□□□□ 0.2
CDPF1-203ENST00000404583 MAP7D2Q96T17 732 aa16.28■□□□□ 0.2
CDPF1-203ENST00000404583 MMTAG2Q9BU76 263 aaKnown RBP16.28■□□□□ 0.2
CDPF1-203ENST00000404583 DHX33Q9H6R0 707 aaKnown RBP16.28■□□□□ 0.2
CDPF1-203ENST00000404583 TFIP11Q9UBB9 837 aaKnown RBP16.28■□□□□ 0.2
CDPF1-203ENST00000404583 STK24Q9Y6E0 443 aa16.28■□□□□ 0.2
CDPF1-203ENST00000404583 MUTP22033 750 aa16.27■□□□□ 0.19
CDPF1-203ENST00000404583 DNM2P50570 870 aa16.27■□□□□ 0.19
CDPF1-203ENST00000404583 NLRP11P59045 1033 aaKnown RBP16.27■□□□□ 0.19
CDPF1-203ENST00000404583 LRIT3Q3SXY7 679 aa16.27■□□□□ 0.19
CDPF1-203ENST00000404583 SLC7A3Q8WY07 619 aa16.27■□□□□ 0.19
CDPF1-203ENST00000404583 CCDC43Q96MW1 224 aaKnown RBP16.27■□□□□ 0.19
CDPF1-203ENST00000404583 AGO3Q9H9G7 860 aaKnown RBP16.27■□□□□ 0.19
CDPF1-203ENST00000404583 DDX19AQ9NUU7 478 aaKnown RBP16.27■□□□□ 0.19
CDPF1-203ENST00000404583 DAXXQ9UER7 740 aaPredicted RBP16.27■□□□□ 0.19
CDPF1-203ENST00000404583 KIAA1024Q9UPX6 916 aa16.27■□□□□ 0.19
CDPF1-203ENST00000404583 ZDHHC9Q9Y397 364 aa16.27■□□□□ 0.19
CDPF1-203ENST00000404583 PPME1Q9Y570 386 aa16.27■□□□□ 0.19
CDPF1-203ENST00000404583 MICAL3Q7RTP6 2002 aa16.26■□□□□ 0.19
CDPF1-203ENST00000404583 KDM3AQ9Y4C1 1321 aa16.26■□□□□ 0.19
CDPF1-203ENST00000404583 RFC5P40937 340 aa16.26■□□□□ 0.19
CDPF1-203ENST00000404583 ZRSR1Q15695 479 aaKnown RBP16.26■□□□□ 0.19
CDPF1-203ENST00000404583 EXOC8Q8IYI6 725 aa16.26■□□□□ 0.19
CDPF1-203ENST00000404583 DEFB123Q8N688 67 aa16.26■□□□□ 0.19
CDPF1-203ENST00000404583 TMEM40Q8WWA1 233 aa16.26■□□□□ 0.19
CDPF1-203ENST00000404583 SEPT8Q92599 483 aa16.26■□□□□ 0.19
CDPF1-203ENST00000404583 TMEM143Q96AN5 459 aa16.26■□□□□ 0.19
CDPF1-203ENST00000404583 ZNF396Q96N95 335 aaPredicted RBP16.26■□□□□ 0.19
CDPF1-203ENST00000404583 OSMRQ99650 979 aa16.26■□□□□ 0.19
CDPF1-203ENST00000404583 JPH2Q9BR39 696 aaPredicted RBP16.26■□□□□ 0.19
CDPF1-203ENST00000404583 IFIH1Q9BYX4 1025 aaKnown RBP16.26■□□□□ 0.19
CDPF1-203ENST00000404583 MTIF3Q9H2K0 278 aaKnown RBP16.26■□□□□ 0.19
CDPF1-203ENST00000404583 SUCLA2Q9P2R7 463 aaPredicted RBP16.26■□□□□ 0.19
CDPF1-203ENST00000404583 DBR1Q9UK59 544 aaKnown RBP16.26■□□□□ 0.19
CDPF1-203ENST00000404583 PTPRSQ13332 1948 aa16.25■□□□□ 0.19
CDPF1-203ENST00000404583 BRD1O95696 1058 aa16.25■□□□□ 0.19
CDPF1-203ENST00000404583 CD52P31358 61 aa16.25■□□□□ 0.19
CDPF1-203ENST00000404583 NASPP49321 788 aaPredicted RBP16.25■□□□□ 0.19
CDPF1-203ENST00000404583 GPC3P51654 580 aa16.25■□□□□ 0.19
CDPF1-203ENST00000404583 CRYBB1P53674 252 aaPredicted RBP16.25■□□□□ 0.19
CDPF1-203ENST00000404583 IKBKEQ14164 716 aa16.25■□□□□ 0.19
CDPF1-203ENST00000404583 EMC2Q15006 297 aa16.25■□□□□ 0.19
CDPF1-203ENST00000404583 SLC39A14Q15043 492 aa16.25■□□□□ 0.19
CDPF1-203ENST00000404583 FAM109BQ6ICB4 259 aaPredicted RBP16.25■□□□□ 0.19
CDPF1-203ENST00000404583 TSHZ1Q6ZSZ6 1077 aa16.25■□□□□ 0.19
CDPF1-203ENST00000404583 RHPN2Q8IUC4 686 aa16.25■□□□□ 0.19
CDPF1-203ENST00000404583 KSR1Q8IVT5 923 aa16.25■□□□□ 0.19
CDPF1-203ENST00000404583 AK8Q96MA6 479 aa16.25■□□□□ 0.19
CDPF1-203ENST00000404583 CLIC6Q96NY7 704 aa16.25■□□□□ 0.19
CDPF1-203ENST00000404583 PLIN2Q99541 437 aa16.25■□□□□ 0.19
CDPF1-203ENST00000404583 MTRQ99707 1265 aa16.25■□□□□ 0.19
CDPF1-203ENST00000404583 ADAMTS10Q9H324 1103 aa16.25■□□□□ 0.19
CDPF1-203ENST00000404583 XPNPEP1Q9NQW7 623 aa16.25■□□□□ 0.19
CDPF1-203ENST00000404583 FBXO2Q9UK22 296 aaPredicted RBP16.25■□□□□ 0.19
CDPF1-203ENST00000404583 SRPRBQ9Y5M8 271 aaKnown RBP16.25■□□□□ 0.19
CDPF1-203ENST00000404583 SLC4A7Q9Y6M7 1214 aa16.25■□□□□ 0.19
CDPF1-203ENST00000404583 GRXCR1A8MXD5 290 aa16.24■□□□□ 0.19
CDPF1-203ENST00000404583 E9PMD0 336 aa16.24■□□□□ 0.19
CDPF1-203ENST00000404583 USO1O60763 962 aaKnown RBP16.24■□□□□ 0.19
CDPF1-203ENST00000404583 DGAT1O75907 488 aa16.24■□□□□ 0.19
CDPF1-203ENST00000404583 BAIAP3O94812 1187 aa16.24■□□□□ 0.19
CDPF1-203ENST00000404583 LONP1P36776 959 aaKnown RBP16.24■□□□□ 0.19
CDPF1-203ENST00000404583 STK38Q15208 465 aa16.24■□□□□ 0.19
CDPF1-203ENST00000404583 SPECC1Q5M775 1068 aa16.24■□□□□ 0.19
CDPF1-203ENST00000404583 CABP7Q86V35 215 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms