RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 ANKRD1Q15327 319 aa17.33■□□□□ 0.36
TPM1-207ENST00000403994 MIER3Q7Z3K6 550 aa17.33■□□□□ 0.36
TPM1-207ENST00000403994 FAM228AQ86W67 206 aa17.33■□□□□ 0.36
TPM1-207ENST00000403994 CMTR2Q8IYT2 770 aaKnown RBP17.33■□□□□ 0.36
TPM1-207ENST00000403994 LRRC71Q8N4P6 559 aa17.33■□□□□ 0.36
TPM1-207ENST00000403994 MAP7D2Q96T17 732 aa17.33■□□□□ 0.36
TPM1-207ENST00000403994 GJB4Q9NTQ9 266 aa17.33■□□□□ 0.36
TPM1-207ENST00000403994 DDX25Q9UHL0 483 aaKnown RBP17.33■□□□□ 0.36
TPM1-207ENST00000403994 MRPL42Q9Y6G3 142 aaKnown RBP17.33■□□□□ 0.36
TPM1-207ENST00000403994 CCDC194A0A1B0GVG4 234 aa17.32■□□□□ 0.36
TPM1-207ENST00000403994 MAGEB2O15479 319 aa17.32■□□□□ 0.36
TPM1-207ENST00000403994 STAG3L1P0CL83 205 aa17.32■□□□□ 0.36
TPM1-207ENST00000403994 BMPR1AP36894 532 aa17.32■□□□□ 0.36
TPM1-207ENST00000403994 SARSP49591 514 aaKnown RBP17.32■□□□□ 0.36
TPM1-207ENST00000403994 GATMP50440 423 aa17.32■□□□□ 0.36
TPM1-207ENST00000403994 CRYBB1P53674 252 aaPredicted RBP17.32■□□□□ 0.36
TPM1-207ENST00000403994 PAN2Q504Q3 1202 aaKnown RBP17.32■□□□□ 0.36
TPM1-207ENST00000403994 OXER1Q8TDS5 423 aa17.32■□□□□ 0.36
TPM1-207ENST00000403994 GTF3C6Q969F1 213 aa17.32■□□□□ 0.36
TPM1-207ENST00000403994 ST3GAL5Q9UNP4 418 aa17.32■□□□□ 0.36
TPM1-207ENST00000403994 AKT3Q9Y243 479 aa17.32■□□□□ 0.36
TPM1-207ENST00000403994 DENND3A2RUS2 1198 aa17.31■□□□□ 0.36
TPM1-207ENST00000403994 RB1P06400 928 aa17.31■□□□□ 0.36
TPM1-207ENST00000403994 XBP1P17861 261 aa17.31■□□□□ 0.36
TPM1-207ENST00000403994 IBSPP21815 317 aaPredicted RBP17.31■□□□□ 0.36
TPM1-207ENST00000403994 LETM2Q2VYF4 491 aa17.31■□□□□ 0.36
TPM1-207ENST00000403994 TCEAL5Q5H9L2 206 aa17.31■□□□□ 0.36
TPM1-207ENST00000403994 EFCAB12Q6NXP0 572 aa17.31■□□□□ 0.36
TPM1-207ENST00000403994 FAM43BQ6ZT52 329 aaPredicted RBP17.31■□□□□ 0.36
TPM1-207ENST00000403994 NEK8Q86SG6 692 aa17.31■□□□□ 0.36
TPM1-207ENST00000403994 BANK1Q8NDB2 785 aa17.31■□□□□ 0.36
TPM1-207ENST00000403994 ADAM2Q99965 735 aa17.31■□□□□ 0.36
TPM1-207ENST00000403994 NSUN3Q9H649 340 aaKnown RBP17.31■□□□□ 0.36
TPM1-207ENST00000403994 KCNMB3Q9NPA1 279 aa17.31■□□□□ 0.36
TPM1-207ENST00000403994 ORC3Q9UBD5 711 aaPredicted RBP17.31■□□□□ 0.36
TPM1-207ENST00000403994 SEPT9Q9UHD8 586 aaPredicted RBP17.31■□□□□ 0.36
TPM1-207ENST00000403994 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.3■□□□□ 0.36
TPM1-207ENST00000403994 TMEM150BA6NC51 233 aa17.3■□□□□ 0.36
TPM1-207ENST00000403994 GPR182O15218 404 aa17.3■□□□□ 0.36
TPM1-207ENST00000403994 GRM6O15303 877 aa17.3■□□□□ 0.36
TPM1-207ENST00000403994 GCFC2P16383 781 aaKnown RBP17.3■□□□□ 0.36
TPM1-207ENST00000403994 TMOD1P28289 359 aa17.3■□□□□ 0.36
TPM1-207ENST00000403994 TBC1D8BQ0IIM8 1120 aa17.3■□□□□ 0.36
TPM1-207ENST00000403994 TARBP2Q15633 366 aaKnown RBP17.3■□□□□ 0.36
TPM1-207ENST00000403994 ME3Q16798 604 aa17.3■□□□□ 0.36
TPM1-207ENST00000403994 ODR4Q5SWX8 454 aa17.3■□□□□ 0.36
TPM1-207ENST00000403994 PIK3AP1Q6ZUJ8 805 aa17.3■□□□□ 0.36
TPM1-207ENST00000403994 NECAB1Q8N987 351 aa17.3■□□□□ 0.36
TPM1-207ENST00000403994 PLVAPQ9BX97 442 aa17.3■□□□□ 0.36
TPM1-207ENST00000403994 LMAN2LQ9H0V9 348 aa17.3■□□□□ 0.36
TPM1-207ENST00000403994 ADAMTS10Q9H324 1103 aa17.3■□□□□ 0.36
TPM1-207ENST00000403994 RGS18Q9NS28 235 aa17.3■□□□□ 0.36
TPM1-207ENST00000403994 C1orf112Q9NSG2 853 aa17.3■□□□□ 0.36
TPM1-207ENST00000403994 NRBP2Q9NSY0 501 aa17.3■□□□□ 0.36
TPM1-207ENST00000403994 VAV3Q9UKW4 847 aa17.3■□□□□ 0.36
TPM1-207ENST00000403994 LRFN2Q9ULH4 789 aa17.3■□□□□ 0.36
TPM1-207ENST00000403994 TRIOO75962 3097 aa17.29■□□□□ 0.36
TPM1-207ENST00000403994 FAM205CA6NFA0 338 aa17.29■□□□□ 0.36
TPM1-207ENST00000403994 C9IYK1 514 aa17.29■□□□□ 0.36
TPM1-207ENST00000403994 MMP1P03956 469 aa17.29■□□□□ 0.36
TPM1-207ENST00000403994 FDPSP14324 419 aaKnown RBP17.29■□□□□ 0.36
TPM1-207ENST00000403994 KCNA5P22460 613 aa17.29■□□□□ 0.36
TPM1-207ENST00000403994 NLRP11P59045 1033 aaKnown RBP17.29■□□□□ 0.36
TPM1-207ENST00000403994 DSC3Q14574 896 aa17.29■□□□□ 0.36
TPM1-207ENST00000403994 COL19A1Q14993 1142 aa17.29■□□□□ 0.36
TPM1-207ENST00000403994 XKR3Q5GH77 459 aa17.29■□□□□ 0.36
TPM1-207ENST00000403994 EARS2Q5JPH6 523 aaKnown RBP17.29■□□□□ 0.36
TPM1-207ENST00000403994 PPP4R3AQ6IN85 833 aa17.29■□□□□ 0.36
TPM1-207ENST00000403994 SLC24A5Q71RS6 500 aa17.29■□□□□ 0.36
TPM1-207ENST00000403994 NSUN7Q8NE18 718 aaKnown RBP17.29■□□□□ 0.36
TPM1-207ENST00000403994 WASF1Q92558 559 aa17.29■□□□□ 0.36
TPM1-207ENST00000403994 CEP89Q96ST8 783 aa17.29■□□□□ 0.36
TPM1-207ENST00000403994 EML1O00423 815 aa17.28■□□□□ 0.36
TPM1-207ENST00000403994 CSPG5O95196 566 aa17.28■□□□□ 0.36
TPM1-207ENST00000403994 STBD1O95210 358 aa17.28■□□□□ 0.36
TPM1-207ENST00000403994 SEC24BO95487 1268 aa17.28■□□□□ 0.36
TPM1-207ENST00000403994 GPC3P51654 580 aa17.28■□□□□ 0.36
TPM1-207ENST00000403994 PPP2R5CQ13362 524 aa17.28■□□□□ 0.36
TPM1-207ENST00000403994 DRP2Q13474 957 aa17.28■□□□□ 0.36
TPM1-207ENST00000403994 LEXMQ3ZCV2 418 aa17.28■□□□□ 0.36
TPM1-207ENST00000403994 MTERF2Q49AM1 385 aa17.28■□□□□ 0.36
TPM1-207ENST00000403994 POTEDQ86YR6 584 aa17.28■□□□□ 0.36
TPM1-207ENST00000403994 ZNF710Q8N1W2 664 aa17.28■□□□□ 0.36
TPM1-207ENST00000403994 TNFRSF25Q93038 417 aa17.28■□□□□ 0.36
TPM1-207ENST00000403994 P2RX5Q93086 422 aa17.28■□□□□ 0.36
TPM1-207ENST00000403994 ZNF668Q96K58 619 aaPredicted RBP17.28■□□□□ 0.36
TPM1-207ENST00000403994 SCLT1Q96NL6 688 aa17.28■□□□□ 0.36
TPM1-207ENST00000403994 NIFKQ9BYG3 293 aaKnown RBP17.28■□□□□ 0.36
TPM1-207ENST00000403994 PCDHB7Q9Y5E2 793 aa17.28■□□□□ 0.36
TPM1-207ENST00000403994 CCNT1O60563 726 aaKnown RBP17.27■□□□□ 0.36
TPM1-207ENST00000403994 EIF5BO60841 1220 aaKnown RBP17.27■□□□□ 0.36
TPM1-207ENST00000403994 ITGB1P05556 798 aa17.27■□□□□ 0.36
TPM1-207ENST00000403994 CENPBP07199 599 aaPredicted RBP17.27■□□□□ 0.36
TPM1-207ENST00000403994 EIF4BP23588 611 aaKnown RBP17.27■□□□□ 0.36
TPM1-207ENST00000403994 KRT2P35908 639 aa17.27■□□□□ 0.36
TPM1-207ENST00000403994 NEK4P51957 841 aa17.27■□□□□ 0.36
TPM1-207ENST00000403994 NR5A1Q13285 461 aa17.27■□□□□ 0.36
TPM1-207ENST00000403994 FAM20AQ96MK3 541 aa17.27■□□□□ 0.36
TPM1-207ENST00000403994 SH2D3AQ9BRG2 576 aa17.27■□□□□ 0.36
TPM1-207ENST00000403994 ALG13Q9NP73 1137 aaKnown RBP17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms