RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 PWWP2AQ96N64 755 aa6.71□□□□□ -1.34
HMGB3P19-201ENST00000403971 CLIC6Q96NY7 704 aa6.71□□□□□ -1.34
HMGB3P19-201ENST00000403971 KCND1Q9NSA2 647 aa6.71□□□□□ -1.34
HMGB3P19-201ENST00000403971 SPATA6Q9NWH7 488 aaPredicted RBP6.71□□□□□ -1.34
HMGB3P19-201ENST00000403971 KLHL42Q9P2K6 505 aa6.71□□□□□ -1.34
HMGB3P19-201ENST00000403971 SMG5Q9UPR3 1016 aaKnown RBP6.71□□□□□ -1.34
HMGB3P19-201ENST00000403971 KCTD3Q9Y597 815 aa6.71□□□□□ -1.34
HMGB3P19-201ENST00000403971 PPP2R3BQ9Y5P8 575 aa6.71□□□□□ -1.34
HMGB3P19-201ENST00000403971 TNKSO95271 1327 aa6.71□□□□□ -1.34
HMGB3P19-201ENST00000403971 PRSS38A1L453 326 aa6.7□□□□□ -1.34
HMGB3P19-201ENST00000403971 TCAF2A6NFQ2 919 aa6.7□□□□□ -1.34
HMGB3P19-201ENST00000403971 H2AFYO75367 372 aaKnown RBP6.7□□□□□ -1.34
HMGB3P19-201ENST00000403971 MYBL2P10244 700 aa6.7□□□□□ -1.34
HMGB3P19-201ENST00000403971 MANFP55145 182 aaKnown RBP6.7□□□□□ -1.34
HMGB3P19-201ENST00000403971 MLLT6P55198 1093 aaPredicted RBP6.7□□□□□ -1.34
HMGB3P19-201ENST00000403971 ROM1Q03395 351 aa6.7□□□□□ -1.34
HMGB3P19-201ENST00000403971 FAPQ12884 760 aa6.7□□□□□ -1.34
HMGB3P19-201ENST00000403971 KLF1Q13351 362 aaPredicted RBP6.7□□□□□ -1.34
HMGB3P19-201ENST00000403971 MOGSQ13724 837 aa6.7□□□□□ -1.34
HMGB3P19-201ENST00000403971 INAVAQ3KP66 663 aa6.7□□□□□ -1.34
HMGB3P19-201ENST00000403971 ESPNLQ6ZVH7 1005 aa6.7□□□□□ -1.34
HMGB3P19-201ENST00000403971 RAVER1Q8IY67 606 aaKnown RBP6.7□□□□□ -1.34
HMGB3P19-201ENST00000403971 E2F7Q96AV8 911 aa6.7□□□□□ -1.34
HMGB3P19-201ENST00000403971 CEP89Q96ST8 783 aa6.7□□□□□ -1.34
HMGB3P19-201ENST00000403971 MENTQ9BUN1 341 aa6.7□□□□□ -1.34
HMGB3P19-201ENST00000403971 BTBD2Q9BX70 525 aa6.7□□□□□ -1.34
HMGB3P19-201ENST00000403971 OR10A5Q9H207 317 aa6.7□□□□□ -1.34
HMGB3P19-201ENST00000403971 PRDM12Q9H4Q4 367 aa6.7□□□□□ -1.34
HMGB3P19-201ENST00000403971 PCDH18Q9HCL0 1135 aa6.7□□□□□ -1.34
HMGB3P19-201ENST00000403971 USP36Q9P275 1121 aaKnown RBP6.7□□□□□ -1.34
HMGB3P19-201ENST00000403971 CNOT6Q9ULM6 557 aaKnown RBP6.7□□□□□ -1.34
HMGB3P19-201ENST00000403971 G3BP2Q9UN86 482 aaKnown RBP6.7□□□□□ -1.34
HMGB3P19-201ENST00000403971 THRAP3Q9Y2W1 955 aaKnown RBP6.7□□□□□ -1.34
HMGB3P19-201ENST00000403971 CUX2O14529 1486 aa6.7□□□□□ -1.34
HMGB3P19-201ENST00000403971 SOGA1O94964 1423 aa6.69□□□□□ -1.34
HMGB3P19-201ENST00000403971 IFT140Q96RY7 1462 aa6.69□□□□□ -1.34
HMGB3P19-201ENST00000403971 LOC100996750A0A140TA64 210 aa6.69□□□□□ -1.34
HMGB3P19-201ENST00000403971 ALDH1L1O75891 902 aa6.69□□□□□ -1.34
HMGB3P19-201ENST00000403971 FBXO21O94952 628 aa6.69□□□□□ -1.34
HMGB3P19-201ENST00000403971 S100BP04271 92 aaPredicted RBP6.69□□□□□ -1.34
HMGB3P19-201ENST00000403971 GPR3P46089 330 aa6.69□□□□□ -1.34
HMGB3P19-201ENST00000403971 CD83Q01151 205 aa6.69□□□□□ -1.34
HMGB3P19-201ENST00000403971 DLX2Q07687 328 aaPredicted RBP6.69□□□□□ -1.34
HMGB3P19-201ENST00000403971 ADCY2Q08462 1091 aa6.69□□□□□ -1.34
HMGB3P19-201ENST00000403971 ODR4Q5SWX8 454 aa6.69□□□□□ -1.34
HMGB3P19-201ENST00000403971 KANK2Q63ZY3 851 aa6.69□□□□□ -1.34
HMGB3P19-201ENST00000403971 TIGD7Q6NT04 549 aaPredicted RBP6.69□□□□□ -1.34
HMGB3P19-201ENST00000403971 CCDC62Q6P9F0 684 aa6.69□□□□□ -1.34
HMGB3P19-201ENST00000403971 KANSL1Q7Z3B3 1105 aa6.69□□□□□ -1.34
HMGB3P19-201ENST00000403971 ADGRG2Q8IZP9 1017 aa6.69□□□□□ -1.34
HMGB3P19-201ENST00000403971 TTLL6Q8N841 843 aa6.69□□□□□ -1.34
HMGB3P19-201ENST00000403971 CALML6Q8TD86 181 aa6.69□□□□□ -1.34
HMGB3P19-201ENST00000403971 ZNF526Q8TF50 670 aaPredicted RBP6.69□□□□□ -1.34
HMGB3P19-201ENST00000403971 ZCCHC14Q8WYQ9 949 aaKnown RBP6.69□□□□□ -1.34
HMGB3P19-201ENST00000403971 FERMT2Q96AC1 680 aa6.69□□□□□ -1.34
HMGB3P19-201ENST00000403971 KRTAP4-6Q9BYQ5 205 aa6.69□□□□□ -1.34
HMGB3P19-201ENST00000403971 CD320Q9NPF0 282 aa6.69□□□□□ -1.34
HMGB3P19-201ENST00000403971 ABCA5Q8WWZ7 1642 aa6.68□□□□□ -1.34
HMGB3P19-201ENST00000403971 A0A1B0GTL3 188 aa6.68□□□□□ -1.34
HMGB3P19-201ENST00000403971 LPLP06858 475 aa6.68□□□□□ -1.34
HMGB3P19-201ENST00000403971 COL6A1P12109 1028 aa6.68□□□□□ -1.34
HMGB3P19-201ENST00000403971 ADCY8P40145 1251 aa6.68□□□□□ -1.34
HMGB3P19-201ENST00000403971 TTF1Q15361 905 aaPredicted RBP6.68□□□□□ -1.34
HMGB3P19-201ENST00000403971 STILQ15468 1287 aa6.68□□□□□ -1.34
HMGB3P19-201ENST00000403971 PRR31Q5SQ13 230 aa6.68□□□□□ -1.34
HMGB3P19-201ENST00000403971 KIAA1841Q6NSI8 718 aa6.68□□□□□ -1.34
HMGB3P19-201ENST00000403971 EAF2Q96CJ1 260 aaPredicted RBP6.68□□□□□ -1.34
HMGB3P19-201ENST00000403971 SLC38A3Q99624 504 aa6.68□□□□□ -1.34
HMGB3P19-201ENST00000403971 MAGEL2Q9UJ55 1249 aa6.68□□□□□ -1.34
HMGB3P19-201ENST00000403971 EDARQ9UNE0 448 aa6.68□□□□□ -1.34
HMGB3P19-201ENST00000403971 WASHC2AQ641Q2 1341 aa6.68□□□□□ -1.34
HMGB3P19-201ENST00000403971 KIF27Q86VH2 1401 aa6.67□□□□□ -1.34
HMGB3P19-201ENST00000403971 RAD54L2Q9Y4B4 1467 aa6.67□□□□□ -1.34
HMGB3P19-201ENST00000403971 PAX4O43316 350 aa6.67□□□□□ -1.34
HMGB3P19-201ENST00000403971 KNG1P01042 644 aa6.67□□□□□ -1.34
HMGB3P19-201ENST00000403971 APEX1P27695 318 aaKnown RBP6.67□□□□□ -1.34
HMGB3P19-201ENST00000403971 LINC00310P59036 64 aa6.67□□□□□ -1.34
HMGB3P19-201ENST00000403971 PCBP2Q15366 365 aaKnown RBP eCLIP6.67□□□□□ -1.34
HMGB3P19-201ENST00000403971 ZNF124Q15973 351 aa6.67□□□□□ -1.34
HMGB3P19-201ENST00000403971 PTPN21Q16825 1174 aa6.67□□□□□ -1.34
HMGB3P19-201ENST00000403971 WDR72Q3MJ13 1102 aa6.67□□□□□ -1.34
HMGB3P19-201ENST00000403971 VWA3BQ502W6 1294 aa6.67□□□□□ -1.34
HMGB3P19-201ENST00000403971 PITRM1Q5JRX3 1037 aa6.67□□□□□ -1.34
HMGB3P19-201ENST00000403971 PGM2L1Q6PCE3 622 aa6.67□□□□□ -1.34
HMGB3P19-201ENST00000403971 TRMT10BQ6PF06 316 aaKnown RBP6.67□□□□□ -1.34
HMGB3P19-201ENST00000403971 POU5F2Q8N7G0 328 aa6.67□□□□□ -1.34
HMGB3P19-201ENST00000403971 C1orf162Q8NEQ5 155 aaPredicted RBP6.67□□□□□ -1.34
HMGB3P19-201ENST00000403971 WDR48Q8TAF3 677 aa6.67□□□□□ -1.34
HMGB3P19-201ENST00000403971 FUBP3Q96I24 572 aaKnown RBP eCLIP6.67□□□□□ -1.34
HMGB3P19-201ENST00000403971 PPP1R16BQ96T49 567 aa6.67□□□□□ -1.34
HMGB3P19-201ENST00000403971 QRSL1Q9H0R6 528 aaKnown RBP6.67□□□□□ -1.34
HMGB3P19-201ENST00000403971 CCM2LQ9NUG4 571 aaPredicted RBP6.67□□□□□ -1.34
HMGB3P19-201ENST00000403971 TMPRSS11EQ9UL52 423 aa6.67□□□□□ -1.34
HMGB3P19-201ENST00000403971 PBRM1Q86U86 1689 aa6.66□□□□□ -1.34
HMGB3P19-201ENST00000403971 NPIPB6E9PJ23 425 aa6.66□□□□□ -1.34
HMGB3P19-201ENST00000403971 FZD9O00144 591 aa6.66□□□□□ -1.34
HMGB3P19-201ENST00000403971 DDX3XO00571 662 aaKnown RBP eCLIP6.66□□□□□ -1.34
HMGB3P19-201ENST00000403971 PCDH8O95206 1070 aa6.66□□□□□ -1.34
HMGB3P19-201ENST00000403971 TSPAN15O95858 294 aa6.66□□□□□ -1.34
HMGB3P19-201ENST00000403971 ENPP1P22413 925 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms