RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 NME8Q8N427 588 aa13.62□□□□□ -0.23
SPTLC1P3-201ENST00000403408 RRP36Q96EU6 259 aaKnown RBP13.62□□□□□ -0.23
SPTLC1P3-201ENST00000403408 PGBD1Q96JS3 809 aa13.62□□□□□ -0.23
SPTLC1P3-201ENST00000403408 OSMRQ99650 979 aa13.62□□□□□ -0.23
SPTLC1P3-201ENST00000403408 ADAM7Q9H2U9 754 aa13.62□□□□□ -0.23
SPTLC1P3-201ENST00000403408 CACNA1IQ9P0X4 2223 aa13.62□□□□□ -0.23
SPTLC1P3-201ENST00000403408 DENND4AQ7Z401 1863 aa13.61□□□□□ -0.23
SPTLC1P3-201ENST00000403408 CFAP47Q6ZTR5 3102 aa13.61□□□□□ -0.23
SPTLC1P3-201ENST00000403408 C2orf71A6NGG8 1288 aa13.61□□□□□ -0.23
SPTLC1P3-201ENST00000403408 GPR32O75388 356 aa13.61□□□□□ -0.23
SPTLC1P3-201ENST00000403408 HOXB8P17481 243 aaPredicted RBP13.61□□□□□ -0.23
SPTLC1P3-201ENST00000403408 MTMR3Q13615 1198 aa13.61□□□□□ -0.23
SPTLC1P3-201ENST00000403408 CLLU1OSQ5K130 101 aa13.61□□□□□ -0.23
SPTLC1P3-201ENST00000403408 CATIPQ7Z7H3 387 aa13.61□□□□□ -0.23
SPTLC1P3-201ENST00000403408 RAB11FIP4Q86YS3 637 aa13.61□□□□□ -0.23
SPTLC1P3-201ENST00000403408 UBALD2Q8IYN6 164 aa13.61□□□□□ -0.23
SPTLC1P3-201ENST00000403408 MXRA8Q9BRK3 442 aa13.61□□□□□ -0.23
SPTLC1P3-201ENST00000403408 ENTPD7Q9NQZ7 604 aa13.61□□□□□ -0.23
SPTLC1P3-201ENST00000403408 C1orf112Q9NSG2 853 aa13.61□□□□□ -0.23
SPTLC1P3-201ENST00000403408 TMEM161AQ9NX61 479 aa13.61□□□□□ -0.23
SPTLC1P3-201ENST00000403408 LIMD1Q9UGP4 676 aa13.61□□□□□ -0.23
SPTLC1P3-201ENST00000403408 CHD6Q8TD26 2715 aa13.61□□□□□ -0.23
SPTLC1P3-201ENST00000403408 DENND3A2RUS2 1198 aa13.6□□□□□ -0.23
SPTLC1P3-201ENST00000403408 HIP1O00291 1037 aa13.6□□□□□ -0.23
SPTLC1P3-201ENST00000403408 RPLP2P05387 115 aaKnown RBP13.6□□□□□ -0.23
SPTLC1P3-201ENST00000403408 LAG3P18627 525 aa13.6□□□□□ -0.23
SPTLC1P3-201ENST00000403408 SMARCA1P28370 1054 aa13.6□□□□□ -0.23
SPTLC1P3-201ENST00000403408 ID4P47928 161 aa13.6□□□□□ -0.23
SPTLC1P3-201ENST00000403408 ABHD15Q6UXT9 468 aa13.6□□□□□ -0.23
SPTLC1P3-201ENST00000403408 TMEM173Q86WV6 379 aaPredicted RBP13.6□□□□□ -0.23
SPTLC1P3-201ENST00000403408 CCDC60Q8IWA6 550 aaPredicted RBP13.6□□□□□ -0.23
SPTLC1P3-201ENST00000403408 SLC39A11Q8N1S5 342 aa13.6□□□□□ -0.23
SPTLC1P3-201ENST00000403408 MRPL43Q8N983 215 aaKnown RBP13.6□□□□□ -0.23
SPTLC1P3-201ENST00000403408 AUTS2Q8WXX7 1259 aa13.6□□□□□ -0.23
SPTLC1P3-201ENST00000403408 MAP3K14Q99558 947 aa13.6□□□□□ -0.23
SPTLC1P3-201ENST00000403408 TMEM117Q9H0C3 514 aa13.6□□□□□ -0.23
SPTLC1P3-201ENST00000403408 AZI2Q9H6S1 392 aa13.6□□□□□ -0.23
SPTLC1P3-201ENST00000403408 ATP6V0A4Q9HBG4 840 aa13.6□□□□□ -0.23
SPTLC1P3-201ENST00000403408 AGO4Q9HCK5 861 aaKnown RBP13.6□□□□□ -0.23
SPTLC1P3-201ENST00000403408 NGRNQ9NPE2 291 aaKnown RBP13.6□□□□□ -0.23
SPTLC1P3-201ENST00000403408 WDR81Q562E7 1941 aa13.6□□□□□ -0.23
SPTLC1P3-201ENST00000403408 NFASCO94856 1347 aa13.6□□□□□ -0.23
SPTLC1P3-201ENST00000403408 C2orf16Q68DN1 1984 aa13.6□□□□□ -0.23
SPTLC1P3-201ENST00000403408 CACNA1GO43497 2377 aa13.59□□□□□ -0.23
SPTLC1P3-201ENST00000403408 MED19A0JLT2 244 aaPredicted RBP13.59□□□□□ -0.23
SPTLC1P3-201ENST00000403408 NT5C1B-RDH14C9J2C7 533 aa13.59□□□□□ -0.23
SPTLC1P3-201ENST00000403408 ADAMTS3O15072 1205 aa13.59□□□□□ -0.23
SPTLC1P3-201ENST00000403408 MAFGO15525 162 aa13.59□□□□□ -0.23
SPTLC1P3-201ENST00000403408 DHX15O43143 795 aaKnown RBP13.59□□□□□ -0.23
SPTLC1P3-201ENST00000403408 C22orf31O95567 290 aa13.59□□□□□ -0.23
SPTLC1P3-201ENST00000403408 VTNP04004 478 aa13.59□□□□□ -0.23
SPTLC1P3-201ENST00000403408 EPCAMP16422 314 aa13.59□□□□□ -0.23
SPTLC1P3-201ENST00000403408 TRDNQ13061 729 aa13.59□□□□□ -0.23
SPTLC1P3-201ENST00000403408 RARS2Q5T160 578 aaKnown RBP13.59□□□□□ -0.23
SPTLC1P3-201ENST00000403408 ERMP1Q7Z2K6 904 aa13.59□□□□□ -0.23
SPTLC1P3-201ENST00000403408 TMC7Q7Z402 723 aa13.59□□□□□ -0.23
SPTLC1P3-201ENST00000403408 ZDHHC14Q8IZN3 488 aa13.59□□□□□ -0.23
SPTLC1P3-201ENST00000403408 CASP10Q92851 521 aa13.59□□□□□ -0.23
SPTLC1P3-201ENST00000403408 NKD2Q969F2 451 aaPredicted RBP13.59□□□□□ -0.23
SPTLC1P3-201ENST00000403408 ELAC1Q9H777 363 aaKnown RBP13.59□□□□□ -0.23
SPTLC1P3-201ENST00000403408 NR2E1Q9Y466 385 aa13.59□□□□□ -0.23
SPTLC1P3-201ENST00000403408 MAP1BP46821 2468 aaKnown RBP13.58□□□□□ -0.23
SPTLC1P3-201ENST00000403408 MYH9P35579 1960 aaKnown RBP13.58□□□□□ -0.24
SPTLC1P3-201ENST00000403408 ERICH2A1L162 156 aa13.58□□□□□ -0.24
SPTLC1P3-201ENST00000403408 FSD2A1L4K1 749 aa13.58□□□□□ -0.24
SPTLC1P3-201ENST00000403408 DDAH1O94760 285 aa13.58□□□□□ -0.24
SPTLC1P3-201ENST00000403408 CLCN5P51795 746 aa13.58□□□□□ -0.24
SPTLC1P3-201ENST00000403408 CRYBB1P53674 252 aaPredicted RBP13.58□□□□□ -0.24
SPTLC1P3-201ENST00000403408 ZNF598Q86UK7 904 aaKnown RBP13.58□□□□□ -0.24
SPTLC1P3-201ENST00000403408 CCDC82Q8N4S0 544 aa13.58□□□□□ -0.24
SPTLC1P3-201ENST00000403408 LINC01465Q8N7H1 131 aa13.58□□□□□ -0.24
SPTLC1P3-201ENST00000403408 NCOA7Q8NI08 942 aa13.58□□□□□ -0.24
SPTLC1P3-201ENST00000403408 BCL7CQ8WUZ0 217 aaPredicted RBP13.58□□□□□ -0.24
SPTLC1P3-201ENST00000403408 RMDN1Q96DB5 314 aa13.58□□□□□ -0.24
SPTLC1P3-201ENST00000403408 ZNF668Q96K58 619 aaPredicted RBP13.58□□□□□ -0.24
SPTLC1P3-201ENST00000403408 ZNF558Q96NG5 402 aa13.58□□□□□ -0.24
SPTLC1P3-201ENST00000403408 ADAMTS10Q9H324 1103 aa13.58□□□□□ -0.24
SPTLC1P3-201ENST00000403408 DOCK8Q8NF50 2099 aa13.58□□□□□ -0.24
SPTLC1P3-201ENST00000403408 DDX39AO00148 427 aaKnown RBP13.57□□□□□ -0.24
SPTLC1P3-201ENST00000403408 MEIS1O00470 390 aa13.57□□□□□ -0.24
SPTLC1P3-201ENST00000403408 SH2B2O14492 632 aaPredicted RBP13.57□□□□□ -0.24
SPTLC1P3-201ENST00000403408 GPR182O15218 404 aa13.57□□□□□ -0.24
SPTLC1P3-201ENST00000403408 HBP1O60381 514 aa13.57□□□□□ -0.24
SPTLC1P3-201ENST00000403408 ITIH3Q06033 890 aa13.57□□□□□ -0.24
SPTLC1P3-201ENST00000403408 TPRNQ4KMQ1 711 aa13.57□□□□□ -0.24
SPTLC1P3-201ENST00000403408 WWC2Q6AWC2 1192 aa13.57□□□□□ -0.24
SPTLC1P3-201ENST00000403408 KIAA1841Q6NSI8 718 aa13.57□□□□□ -0.24
SPTLC1P3-201ENST00000403408 ECHDC2Q86YB7 292 aa13.57□□□□□ -0.24
SPTLC1P3-201ENST00000403408 FLCNQ8NFG4 579 aa13.57□□□□□ -0.24
SPTLC1P3-201ENST00000403408 CTCFLQ8NI51 663 aaPredicted RBP13.57□□□□□ -0.24
SPTLC1P3-201ENST00000403408 SLC22A17Q8WUG5 538 aa13.57□□□□□ -0.24
SPTLC1P3-201ENST00000403408 NECTIN4Q96NY8 510 aa13.57□□□□□ -0.24
SPTLC1P3-201ENST00000403408 VN1R3Q9BXE9 311 aa13.57□□□□□ -0.24
SPTLC1P3-201ENST00000403408 SPG21Q9NZD8 308 aa13.57□□□□□ -0.24
SPTLC1P3-201ENST00000403408 SEC63Q9UGP8 760 aaKnown RBP13.57□□□□□ -0.24
SPTLC1P3-201ENST00000403408 PUF60Q9UHX1 559 aaKnown RBP13.57□□□□□ -0.24
SPTLC1P3-201ENST00000403408 SPDYE3A6NKU9 549 aa13.56□□□□□ -0.24
SPTLC1P3-201ENST00000403408 B4GALT3O60512 393 aa13.56□□□□□ -0.24
SPTLC1P3-201ENST00000403408 EOMESO95936 686 aa13.56□□□□□ -0.24
SPTLC1P3-201ENST00000403408 SRGAP2BP0DMP2 458 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms