RNA–Protein interactions for RNA: ENST00000402989.5

SMC6-203, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMC6, Length 3,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-203ENST00000402989 UNC45AQ9H3U1 944 aa4.76□□□□□ -1.65
SMC6-203ENST00000402989 PARVGQ9HBI0 331 aa4.76□□□□□ -1.65
SMC6-203ENST00000402989 FAM184BQ9ULE4 1060 aa4.76□□□□□ -1.65
SMC6-203ENST00000402989 SUGT1Q9Y2Z0 365 aa4.76□□□□□ -1.65
SMC6-203ENST00000402989 SCN9AQ15858 1988 aa4.76□□□□□ -1.65
SMC6-203ENST00000402989 RAD51CO43502 376 aa4.75□□□□□ -1.65
SMC6-203ENST00000402989 HIP1RO75146 1068 aa4.75□□□□□ -1.65
SMC6-203ENST00000402989 ITGA4P13612 1032 aa4.75□□□□□ -1.65
SMC6-203ENST00000402989 KRT13P13646 458 aa4.75□□□□□ -1.65
SMC6-203ENST00000402989 MCM3P25205 808 aa4.75□□□□□ -1.65
SMC6-203ENST00000402989 GCLMP48507 274 aa4.75□□□□□ -1.65
SMC6-203ENST00000402989 NOVP48745 357 aa4.75□□□□□ -1.65
SMC6-203ENST00000402989 GNGT1P63211 74 aa4.75□□□□□ -1.65
SMC6-203ENST00000402989 PLA2G4FQ68DD2 849 aa4.75□□□□□ -1.65
SMC6-203ENST00000402989 MIER3Q7Z3K6 550 aa4.75□□□□□ -1.65
SMC6-203ENST00000402989 VPS36Q86VN1 386 aa4.75□□□□□ -1.65
SMC6-203ENST00000402989 NAP1L4Q99733 375 aaKnown RBP4.75□□□□□ -1.65
SMC6-203ENST00000402989 GLT8D2Q9H1C3 349 aa4.75□□□□□ -1.65
SMC6-203ENST00000402989 CWC15Q9P013 229 aaKnown RBP4.75□□□□□ -1.65
SMC6-203ENST00000402989 ZNF70Q9UC06 446 aaPredicted RBP4.75□□□□□ -1.65
SMC6-203ENST00000402989 DNAJC12Q9UKB3 198 aa4.75□□□□□ -1.65
SMC6-203ENST00000402989 VAV3Q9UKW4 847 aa4.75□□□□□ -1.65
SMC6-203ENST00000402989 FRMD4BQ9Y2L6 1034 aa4.75□□□□□ -1.65
SMC6-203ENST00000402989 ARFGEF1Q9Y6D6 1849 aa4.75□□□□□ -1.65
SMC6-203ENST00000402989 VGLL3A8MV65 326 aa4.75□□□□□ -1.65
SMC6-203ENST00000402989 IPO5O00410 1097 aaKnown RBP4.75□□□□□ -1.65
SMC6-203ENST00000402989 KRIT1O00522 736 aa4.75□□□□□ -1.65
SMC6-203ENST00000402989 EVI5O60447 810 aa4.75□□□□□ -1.65
SMC6-203ENST00000402989 SLITRK3O94933 977 aa4.75□□□□□ -1.65
SMC6-203ENST00000402989 EYA4O95677 639 aa4.75□□□□□ -1.65
SMC6-203ENST00000402989 FOSP01100 380 aaPredicted RBP4.75□□□□□ -1.65
SMC6-203ENST00000402989 H2AFZP0C0S5 128 aa4.75□□□□□ -1.65
SMC6-203ENST00000402989 INPP5BP32019 993 aa4.75□□□□□ -1.65
SMC6-203ENST00000402989 STAT1P42224 750 aa4.75□□□□□ -1.65
SMC6-203ENST00000402989 CCT5P48643 541 aa4.75□□□□□ -1.65
SMC6-203ENST00000402989 NT5C2P49902 561 aa4.75□□□□□ -1.65
SMC6-203ENST00000402989 NPEPPSP55786 919 aa4.75□□□□□ -1.65
SMC6-203ENST00000402989 DLG4P78352 724 aa4.75□□□□□ -1.65
SMC6-203ENST00000402989 MYL7Q01449 175 aa4.75□□□□□ -1.65
SMC6-203ENST00000402989 DRAP1Q14919 205 aaPredicted RBP4.75□□□□□ -1.65
SMC6-203ENST00000402989 NAB2Q15742 525 aa4.75□□□□□ -1.65
SMC6-203ENST00000402989 CBWD6Q4V339 395 aa4.75□□□□□ -1.65
SMC6-203ENST00000402989 CBWD3Q5JTY5 395 aa4.75□□□□□ -1.65
SMC6-203ENST00000402989 CBWD5Q5RIA9 395 aa4.75□□□□□ -1.65
SMC6-203ENST00000402989 FAM102BQ5T8I3 360 aa4.75□□□□□ -1.65
SMC6-203ENST00000402989 AADACL2Q6P093 401 aa4.75□□□□□ -1.65
SMC6-203ENST00000402989 H2AFVQ71UI9 128 aa4.75□□□□□ -1.65
SMC6-203ENST00000402989 UBLCP1Q8WVY7 318 aaPredicted RBP4.75□□□□□ -1.65
SMC6-203ENST00000402989 AKT1S1Q96B36 256 aa4.75□□□□□ -1.65
SMC6-203ENST00000402989 SAAL1Q96ER3 474 aa4.75□□□□□ -1.65
SMC6-203ENST00000402989 RPGRIP1Q96KN7 1286 aa4.75□□□□□ -1.65
SMC6-203ENST00000402989 TEKT3Q9BXF9 490 aa4.75□□□□□ -1.65
SMC6-203ENST00000402989 UBXN6Q9BZV1 441 aa4.75□□□□□ -1.65
SMC6-203ENST00000402989 UBE2TQ9NPD8 197 aaPredicted RBP4.75□□□□□ -1.65
SMC6-203ENST00000402989 TYW1Q9NV66 732 aaKnown RBP4.75□□□□□ -1.65
SMC6-203ENST00000402989 TAS2R14Q9NYV8 317 aa4.75□□□□□ -1.65
SMC6-203ENST00000402989 TMOD4Q9NZQ9 345 aa4.75□□□□□ -1.65
SMC6-203ENST00000402989 NAGPAQ9UK23 515 aa4.75□□□□□ -1.65
SMC6-203ENST00000402989 GJA3Q9Y6H8 435 aa4.75□□□□□ -1.65
SMC6-203ENST00000402989 PSME4Q14997 1843 aa4.75□□□□□ -1.65
SMC6-203ENST00000402989 SSU72P8A0A1W2PR75 194 aa4.75□□□□□ -1.65
SMC6-203ENST00000402989 SLC16A4O15374 487 aa4.75□□□□□ -1.65
SMC6-203ENST00000402989 FLOT1O75955 427 aa4.75□□□□□ -1.65
SMC6-203ENST00000402989 HARSP12081 509 aaKnown RBP4.75□□□□□ -1.65
SMC6-203ENST00000402989 TNFAIP3P21580 790 aa4.75□□□□□ -1.65
SMC6-203ENST00000402989 GJC1P36383 396 aa4.75□□□□□ -1.65
SMC6-203ENST00000402989 PRELPP51888 382 aa4.75□□□□□ -1.65
SMC6-203ENST00000402989 GALCP54803 685 aa4.75□□□□□ -1.65
SMC6-203ENST00000402989 CDK17Q00537 523 aa4.75□□□□□ -1.65
SMC6-203ENST00000402989 CEP55Q53EZ4 464 aa4.75□□□□□ -1.65
SMC6-203ENST00000402989 ODF2Q5BJF6 829 aa4.75□□□□□ -1.65
SMC6-203ENST00000402989 LMBRD2Q68DH5 695 aaPredicted RBP4.75□□□□□ -1.65
SMC6-203ENST00000402989 PALB2Q86YC2 1186 aa4.75□□□□□ -1.65
SMC6-203ENST00000402989 IFT20Q8IY31 132 aa4.75□□□□□ -1.65
SMC6-203ENST00000402989 SLC20A1Q8WUM9 679 aa4.75□□□□□ -1.65
SMC6-203ENST00000402989 CASKIN2Q8WXE0 1202 aa4.75□□□□□ -1.65
SMC6-203ENST00000402989 KAT5Q92993 513 aa4.75□□□□□ -1.65
SMC6-203ENST00000402989 CNKSR1Q969H4 720 aa4.75□□□□□ -1.65
SMC6-203ENST00000402989 SLC35C1Q96A29 364 aa4.75□□□□□ -1.65
SMC6-203ENST00000402989 FAM20AQ96MK3 541 aa4.75□□□□□ -1.65
SMC6-203ENST00000402989 ZIM3Q96PE6 472 aa4.75□□□□□ -1.65
SMC6-203ENST00000402989 TRIM51Q9BSJ1 452 aa4.75□□□□□ -1.65
SMC6-203ENST00000402989 IDI2Q9BXS1 227 aa4.75□□□□□ -1.65
SMC6-203ENST00000402989 MED4Q9NPJ6 270 aa4.75□□□□□ -1.65
SMC6-203ENST00000402989 AMACRQ9UHK6 382 aa4.75□□□□□ -1.65
SMC6-203ENST00000402989 SLX4Q8IY92 1834 aa4.75□□□□□ -1.65
SMC6-203ENST00000402989 KLRG2A4D1S0 409 aaPredicted RBP4.74□□□□□ -1.65
SMC6-203ENST00000402989 RBAK-RBAKDNI3L0D1 243 aa4.74□□□□□ -1.65
SMC6-203ENST00000402989 AGPSO00116 658 aa4.74□□□□□ -1.65
SMC6-203ENST00000402989 DDX3XO00571 662 aaKnown RBP eCLIP4.74□□□□□ -1.652e-8■■■■□ 24.4
SMC6-203ENST00000402989 TGFB1I1O43294 461 aa4.74□□□□□ -1.65
SMC6-203ENST00000402989 HNRNPH3P31942 346 aaKnown RBP4.74□□□□□ -1.65
SMC6-203ENST00000402989 PSMC2P35998 433 aaKnown RBP4.74□□□□□ -1.65
SMC6-203ENST00000402989 PEX3P56589 373 aa4.74□□□□□ -1.65
SMC6-203ENST00000402989 TNNC1P63316 161 aa4.74□□□□□ -1.65
SMC6-203ENST00000402989 ASTE1Q2TB18 679 aaPredicted RBP4.74□□□□□ -1.65
SMC6-203ENST00000402989 C2CD6Q53TS8 623 aa4.74□□□□□ -1.65
SMC6-203ENST00000402989 CEP85LQ5SZL2 805 aa4.74□□□□□ -1.65
SMC6-203ENST00000402989 TATDN1Q6P1N9 297 aa4.74□□□□□ -1.65
SMC6-203ENST00000402989 PADI6Q6TGC4 694 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms