RNA–Protein interactions for RNA: ENST00000400911.7

VAMP1-203, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-203ENST00000400911 FAM86B1E9PN63 330 aa16.56■□□□□ 0.24
VAMP1-203ENST00000400911 DHX15O43143 795 aaKnown RBP16.56■□□□□ 0.24
VAMP1-203ENST00000400911 GPR32O75388 356 aa16.56■□□□□ 0.24
VAMP1-203ENST00000400911 VTNP04004 478 aa16.56■□□□□ 0.24
VAMP1-203ENST00000400911 FAM86B2P0C5J1 330 aa16.56■□□□□ 0.24
VAMP1-203ENST00000400911 SRGAP2BP0DMP2 458 aa16.56■□□□□ 0.24
VAMP1-203ENST00000400911 LAG3P18627 525 aa16.56■□□□□ 0.24
VAMP1-203ENST00000400911 SREBF1P36956 1147 aa16.56■□□□□ 0.24
VAMP1-203ENST00000400911 PLCB3Q01970 1234 aa16.56■□□□□ 0.24
VAMP1-203ENST00000400911 DSC3Q14574 896 aa16.56■□□□□ 0.24
VAMP1-203ENST00000400911 CREB3L3Q68CJ9 461 aa16.56■□□□□ 0.24
VAMP1-203ENST00000400911 MIS18BP1Q6P0N0 1132 aa16.56■□□□□ 0.24
VAMP1-203ENST00000400911 SYNE3Q6ZMZ3 975 aa16.56■□□□□ 0.24
VAMP1-203ENST00000400911 LRRC55Q6ZSA7 311 aa16.56■□□□□ 0.24
VAMP1-203ENST00000400911 CKAP2LQ8IYA6 745 aa16.56■□□□□ 0.24
VAMP1-203ENST00000400911 METTL13Q8N6R0 699 aa16.56■□□□□ 0.24
VAMP1-203ENST00000400911 SNX27Q96L92 541 aa16.56■□□□□ 0.24
VAMP1-203ENST00000400911 YTHDC1Q96MU7 727 aaKnown RBP16.56■□□□□ 0.24
VAMP1-203ENST00000400911 CASD1Q96PB1 797 aa16.56■□□□□ 0.24
VAMP1-203ENST00000400911 ELAC1Q9H777 363 aaKnown RBP16.56■□□□□ 0.24
VAMP1-203ENST00000400911 COL1A2P08123 1366 aa16.55■□□□□ 0.24
VAMP1-203ENST00000400911 ATG2AQ2TAZ0 1938 aa16.55■□□□□ 0.24
VAMP1-203ENST00000400911 CNTNAP5Q8WYK1 1306 aa16.55■□□□□ 0.24
VAMP1-203ENST00000400911 GFRA3O60609 400 aa16.55■□□□□ 0.24
VAMP1-203ENST00000400911 C22orf31O95567 290 aa16.55■□□□□ 0.24
VAMP1-203ENST00000400911 PDGFBP01127 241 aaPredicted RBP16.55■□□□□ 0.24
VAMP1-203ENST00000400911 PBX3P40426 434 aa16.55■□□□□ 0.24
VAMP1-203ENST00000400911 FUT2Q10981 343 aa16.55■□□□□ 0.24
VAMP1-203ENST00000400911 NECTIN1Q15223 517 aa16.55■□□□□ 0.24
VAMP1-203ENST00000400911 PPP1R18Q6NYC8 613 aa16.55■□□□□ 0.24
VAMP1-203ENST00000400911 KCNT2Q6UVM3 1135 aa16.55■□□□□ 0.24
VAMP1-203ENST00000400911 NIPA1Q7RTP0 329 aa16.55■□□□□ 0.24
VAMP1-203ENST00000400911 ZBTB33Q86T24 672 aa16.55■□□□□ 0.24
VAMP1-203ENST00000400911 PLA2G4DQ86XP0 818 aa16.55■□□□□ 0.24
VAMP1-203ENST00000400911 RASGRP4Q8TDF6 673 aa16.55■□□□□ 0.24
VAMP1-203ENST00000400911 ATOH1Q92858 354 aaPredicted RBP16.55■□□□□ 0.24
VAMP1-203ENST00000400911 TMEM117Q9H0C3 514 aa16.55■□□□□ 0.24
VAMP1-203ENST00000400911 NGRNQ9NPE2 291 aaKnown RBP16.55■□□□□ 0.24
VAMP1-203ENST00000400911 TSHZ2Q9NRE2 1034 aa16.55■□□□□ 0.24
VAMP1-203ENST00000400911 CDH22Q9UJ99 828 aa16.55■□□□□ 0.24
VAMP1-203ENST00000400911 DMDP11532 3685 aa16.55■□□□□ 0.24
VAMP1-203ENST00000400911 IPO5O00410 1097 aaKnown RBP16.54■□□□□ 0.24
VAMP1-203ENST00000400911 HOXB8P17481 243 aaPredicted RBP16.54■□□□□ 0.24
VAMP1-203ENST00000400911 CLK2P49760 499 aaKnown RBP16.54■□□□□ 0.24
VAMP1-203ENST00000400911 AP3B2Q13367 1082 aa16.54■□□□□ 0.24
VAMP1-203ENST00000400911 TMC7Q7Z402 723 aa16.54■□□□□ 0.24
VAMP1-203ENST00000400911 TEX2Q8IWB9 1127 aa16.54■□□□□ 0.24
VAMP1-203ENST00000400911 RIPOR3Q96MK2 946 aa16.54■□□□□ 0.24
VAMP1-203ENST00000400911 RNF19AQ9NV58 838 aa16.54■□□□□ 0.24
VAMP1-203ENST00000400911 RBM28Q9NW13 759 aaKnown RBP16.54■□□□□ 0.24
VAMP1-203ENST00000400911 BARHL2Q9NY43 387 aa16.54■□□□□ 0.24
VAMP1-203ENST00000400911 MAFBQ9Y5Q3 323 aaPredicted RBP16.54■□□□□ 0.24
VAMP1-203ENST00000400911 H0Y858 1186 aa16.53■□□□□ 0.24
VAMP1-203ENST00000400911 KRT17Q04695 432 aa16.53■□□□□ 0.24
VAMP1-203ENST00000400911 RTN1Q16799 776 aa16.53■□□□□ 0.24
VAMP1-203ENST00000400911 JAKMIP3Q5VZ66 844 aa16.53■□□□□ 0.24
VAMP1-203ENST00000400911 APOA5Q6Q788 366 aa16.53■□□□□ 0.24
VAMP1-203ENST00000400911 KREMEN2Q8NCW0 462 aa16.53■□□□□ 0.24
VAMP1-203ENST00000400911 BBXQ8WY36 941 aaPredicted RBP16.53■□□□□ 0.24
VAMP1-203ENST00000400911 ZNF558Q96NG5 402 aa16.53■□□□□ 0.24
VAMP1-203ENST00000400911 BRPF3Q9ULD4 1205 aa16.53■□□□□ 0.24
VAMP1-203ENST00000400911 NR2E1Q9Y466 385 aa16.53■□□□□ 0.24
VAMP1-203ENST00000400911 IGLV3-22A0A075B6J6 115 aa16.52■□□□□ 0.24
VAMP1-203ENST00000400911 HOXA2O43364 376 aa16.52■□□□□ 0.24
VAMP1-203ENST00000400911 CLCN3P51790 818 aa16.52■□□□□ 0.24
VAMP1-203ENST00000400911 NLRP11P59045 1033 aaKnown RBP16.52■□□□□ 0.24
VAMP1-203ENST00000400911 ECHDC2Q86YB7 292 aa16.52■□□□□ 0.24
VAMP1-203ENST00000400911 ABI1Q8IZP0 508 aa16.52■□□□□ 0.24
VAMP1-203ENST00000400911 LRRC43Q8N309 656 aa16.52■□□□□ 0.24
VAMP1-203ENST00000400911 MRPL43Q8N983 215 aaKnown RBP16.52■□□□□ 0.24
VAMP1-203ENST00000400911 RNF169Q8NCN4 708 aa16.52■□□□□ 0.24
VAMP1-203ENST00000400911 ESYT1Q9BSJ8 1104 aa16.52■□□□□ 0.24
VAMP1-203ENST00000400911 ZNF577Q9BSK1 485 aa16.52■□□□□ 0.24
VAMP1-203ENST00000400911 IRF2BPLQ9H1B7 796 aa16.52■□□□□ 0.24
VAMP1-203ENST00000400911 GLT8D2Q9H1C3 349 aa16.52■□□□□ 0.24
VAMP1-203ENST00000400911 ADAMTS10Q9H324 1103 aa16.52■□□□□ 0.24
VAMP1-203ENST00000400911 SPG21Q9NZD8 308 aa16.52■□□□□ 0.24
VAMP1-203ENST00000400911 ADAMTS3O15072 1205 aa16.51■□□□□ 0.23
VAMP1-203ENST00000400911 ZBTB43O43298 467 aa16.51■□□□□ 0.23
VAMP1-203ENST00000400911 ZSCAN20P17040 1043 aaPredicted RBP16.51■□□□□ 0.23
VAMP1-203ENST00000400911 PPM1AP35813 382 aa16.51■□□□□ 0.23
VAMP1-203ENST00000400911 TPRNQ4KMQ1 711 aa16.51■□□□□ 0.23
VAMP1-203ENST00000400911 EFCAB12Q6NXP0 572 aa16.51■□□□□ 0.23
VAMP1-203ENST00000400911 CRYGNQ8WXF5 182 aa16.51■□□□□ 0.23
VAMP1-203ENST00000400911 CASP10Q92851 521 aa16.51■□□□□ 0.23
VAMP1-203ENST00000400911 ZNF668Q96K58 619 aaPredicted RBP16.51■□□□□ 0.23
VAMP1-203ENST00000400911 TCEANC2Q96MN5 208 aa16.51■□□□□ 0.23
VAMP1-203ENST00000400911 ADAM7Q9H2U9 754 aa16.51■□□□□ 0.23
VAMP1-203ENST00000400911 POMKQ9H5K3 350 aa16.51■□□□□ 0.23
VAMP1-203ENST00000400911 TBC1D22BQ9NU19 505 aa16.51■□□□□ 0.23
VAMP1-203ENST00000400911 GABBR1Q9UBS5 961 aa16.51■□□□□ 0.23
VAMP1-203ENST00000400911 AKT3Q9Y243 479 aa16.51■□□□□ 0.23
VAMP1-203ENST00000400911 HCFC2Q9Y5Z7 792 aa16.51■□□□□ 0.23
VAMP1-203ENST00000400911 C2orf71A6NGG8 1288 aa16.5■□□□□ 0.23
VAMP1-203ENST00000400911 C2CD4DB7Z1M9 353 aa16.5■□□□□ 0.23
VAMP1-203ENST00000400911 hCG_1984214I3L0E3 225 aa16.5■□□□□ 0.23
VAMP1-203ENST00000400911 MAGEB2O15479 319 aa16.5■□□□□ 0.23
VAMP1-203ENST00000400911 BRD1O95696 1058 aa16.5■□□□□ 0.23
VAMP1-203ENST00000400911 PSAPP07602 524 aa16.5■□□□□ 0.23
VAMP1-203ENST00000400911 CYP3A4P08684 503 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms