RNA–Protein interactions for RNA: ENST00000399973.1

USP16-202, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 3

Gene USP16, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-202ENST00000399973 FNDC1Q4ZHG4 1894 aaPredicted RBP9.45□□□□□ -0.9
USP16-202ENST00000399973 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.44□□□□□ -0.9
USP16-202ENST00000399973 LINC01553A4QN01 128 aa9.44□□□□□ -0.9
USP16-202ENST00000399973 MAGEB2O15479 319 aa9.44□□□□□ -0.9
USP16-202ENST00000399973 DKC1O60832 514 aaKnown RBP eCLIP9.44□□□□□ -0.9
USP16-202ENST00000399973 RPS6KA5O75582 802 aa9.44□□□□□ -0.9
USP16-202ENST00000399973 TMOD1P28289 359 aa9.44□□□□□ -0.9
USP16-202ENST00000399973 TXKP42681 527 aa9.44□□□□□ -0.9
USP16-202ENST00000399973 QARSP47897 775 aaKnown RBP9.44□□□□□ -0.9
USP16-202ENST00000399973 PSMC5P62195 406 aa9.44□□□□□ -0.9
USP16-202ENST00000399973 ADGRE1Q14246 886 aa9.44□□□□□ -0.9
USP16-202ENST00000399973 CCDC85BQ15834 202 aaPredicted RBP9.44□□□□□ -0.9
USP16-202ENST00000399973 B3GNT9Q6UX72 402 aa9.44□□□□□ -0.9
USP16-202ENST00000399973 NME8Q8N427 588 aa9.44□□□□□ -0.9
USP16-202ENST00000399973 USP38Q8NB14 1042 aa9.44□□□□□ -0.9
USP16-202ENST00000399973 SLC17A8Q8NDX2 589 aa9.44□□□□□ -0.9
USP16-202ENST00000399973 GDPD5Q8WTR4 605 aa9.44□□□□□ -0.9
USP16-202ENST00000399973 TMEM40Q8WWA1 233 aa9.44□□□□□ -0.9
USP16-202ENST00000399973 NLRP7Q8WX94 980 aa9.44□□□□□ -0.9
USP16-202ENST00000399973 LINC01599Q8WXQ3 324 aa9.44□□□□□ -0.9
USP16-202ENST00000399973 DYDC2Q96IM9 177 aa9.44□□□□□ -0.9
USP16-202ENST00000399973 TMX3Q96JJ7 454 aa9.44□□□□□ -0.9
USP16-202ENST00000399973 CDHR5Q9HBB8 845 aa9.44□□□□□ -0.9
USP16-202ENST00000399973 PADI3Q9ULW8 664 aa9.44□□□□□ -0.9
USP16-202ENST00000399973 NOL7Q9UMY1 257 aaKnown RBP9.44□□□□□ -0.9
USP16-202ENST00000399973 NOC2LQ9Y3T9 749 aaKnown RBP9.44□□□□□ -0.9
USP16-202ENST00000399973 KDM3AQ9Y4C1 1321 aa9.44□□□□□ -0.9
USP16-202ENST00000399973 TTC3P53804 2025 aa9.44□□□□□ -0.9
USP16-202ENST00000399973 MYH15Q9Y2K3 1946 aa9.43□□□□□ -0.9
USP16-202ENST00000399973 ADGRA3Q8IWK6 1321 aa9.43□□□□□ -0.9
USP16-202ENST00000399973 DENND3A2RUS2 1198 aa9.43□□□□□ -0.9
USP16-202ENST00000399973 EPOPA6NHQ4 379 aa9.43□□□□□ -0.9
USP16-202ENST00000399973 POTEMA6NI47 508 aa9.43□□□□□ -0.9
USP16-202ENST00000399973 GTPBP6O43824 516 aaPredicted RBP9.43□□□□□ -0.9
USP16-202ENST00000399973 MCM2P49736 904 aa9.43□□□□□ -0.9
USP16-202ENST00000399973 POLGP54098 1239 aaPredicted RBP9.43□□□□□ -0.9
USP16-202ENST00000399973 NLRP11P59045 1033 aaKnown RBP9.43□□□□□ -0.9
USP16-202ENST00000399973 CTTNQ14247 550 aaKnown RBP9.43□□□□□ -0.9
USP16-202ENST00000399973 NBR1Q14596 966 aa9.43□□□□□ -0.9
USP16-202ENST00000399973 EPHA7Q15375 998 aa9.43□□□□□ -0.9
USP16-202ENST00000399973 TTC38Q5R3I4 469 aa9.43□□□□□ -0.9
USP16-202ENST00000399973 MCTP1Q6DN14 999 aa9.43□□□□□ -0.9
USP16-202ENST00000399973 ANO5Q75V66 913 aa9.43□□□□□ -0.9
USP16-202ENST00000399973 FAM228AQ86W67 206 aa9.43□□□□□ -0.9
USP16-202ENST00000399973 NOSTRINQ8IVI9 506 aa9.43□□□□□ -0.9
USP16-202ENST00000399973 FBXO18Q8NFZ0 1043 aa9.43□□□□□ -0.9
USP16-202ENST00000399973 CEP170P1Q96L14 293 aa9.43□□□□□ -0.9
USP16-202ENST00000399973 TGS1Q96RS0 853 aaKnown RBP9.43□□□□□ -0.9
USP16-202ENST00000399973 C17orf80Q9BSJ5 609 aa9.43□□□□□ -0.9
USP16-202ENST00000399973 FTHL17Q9BXU8 183 aa9.43□□□□□ -0.9
USP16-202ENST00000399973 FOXP1Q9H334 677 aaPredicted RBP9.43□□□□□ -0.9
USP16-202ENST00000399973 TTC12Q9H892 705 aaPredicted RBP9.43□□□□□ -0.9
USP16-202ENST00000399973 RGL1Q9NZL6 768 aa9.43□□□□□ -0.9
USP16-202ENST00000399973 WRAP73Q9P2S5 460 aaPredicted RBP9.43□□□□□ -0.9
USP16-202ENST00000399973 LRFN2Q9ULH4 789 aa9.43□□□□□ -0.9
USP16-202ENST00000399973 PCDHA12Q9UN75 941 aa9.43□□□□□ -0.9
USP16-202ENST00000399973 SMC3Q9UQE7 1217 aa9.43□□□□□ -0.9
USP16-202ENST00000399973 INSL6Q9Y581 213 aa9.43□□□□□ -0.9
USP16-202ENST00000399973 PLXNA4Q9HCM2 1894 aa9.42□□□□□ -0.9
USP16-202ENST00000399973 COL6A3P12111 3177 aa9.42□□□□□ -0.9
USP16-202ENST00000399973 H3BQV1 296 aa9.42□□□□□ -0.9
USP16-202ENST00000399973 CSPG5O95196 566 aa9.42□□□□□ -0.9
USP16-202ENST00000399973 P4HBP07237 508 aaKnown RBP9.42□□□□□ -0.9
USP16-202ENST00000399973 OR52Z1P0C646 297 aa9.42□□□□□ -0.9
USP16-202ENST00000399973 GJB2P29033 226 aa9.42□□□□□ -0.9
USP16-202ENST00000399973 YWHABP31946 246 aaKnown RBP9.42□□□□□ -0.9
USP16-202ENST00000399973 DNM2P50570 870 aa9.42□□□□□ -0.9
USP16-202ENST00000399973 CRYBB1P53674 252 aaPredicted RBP9.42□□□□□ -0.9
USP16-202ENST00000399973 NPEPPSP55786 919 aa9.42□□□□□ -0.9
USP16-202ENST00000399973 HTRA4P83105 476 aaPredicted RBP9.42□□□□□ -0.9
USP16-202ENST00000399973 SPIRE1Q08AE8 756 aa9.42□□□□□ -0.9
USP16-202ENST00000399973 DRP2Q13474 957 aa9.42□□□□□ -0.9
USP16-202ENST00000399973 SKIV2LQ15477 1246 aaKnown RBP9.42□□□□□ -0.9
USP16-202ENST00000399973 TARBP2Q15633 366 aaKnown RBP9.42□□□□□ -0.9
USP16-202ENST00000399973 ZNF174Q15697 407 aa9.42□□□□□ -0.9
USP16-202ENST00000399973 PAN2Q504Q3 1202 aaKnown RBP9.42□□□□□ -0.9
USP16-202ENST00000399973 XKR9Q5GH70 373 aa9.42□□□□□ -0.9
USP16-202ENST00000399973 ODR4Q5SWX8 454 aa9.42□□□□□ -0.9
USP16-202ENST00000399973 RHPN2Q8IUC4 686 aa9.42□□□□□ -0.9
USP16-202ENST00000399973 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.42□□□□□ -0.9
USP16-202ENST00000399973 TPH2Q8IWU9 490 aa9.42□□□□□ -0.9
USP16-202ENST00000399973 LINC01465Q8N7H1 131 aa9.42□□□□□ -0.9
USP16-202ENST00000399973 FBXO22Q8NEZ5 403 aa9.42□□□□□ -0.9
USP16-202ENST00000399973 SLC7A3Q8WY07 619 aa9.42□□□□□ -0.9
USP16-202ENST00000399973 TOP1MTQ969P6 601 aa9.42□□□□□ -0.9
USP16-202ENST00000399973 NLRP4Q96MN2 994 aa9.42□□□□□ -0.9
USP16-202ENST00000399973 EIF2AK1Q9BQI3 630 aaKnown RBP9.42□□□□□ -0.9
USP16-202ENST00000399973 NIFKQ9BYG3 293 aaKnown RBP9.42□□□□□ -0.9
USP16-202ENST00000399973 TMEM60Q9H2L4 133 aa9.42□□□□□ -0.9
USP16-202ENST00000399973 ERVK-5Q9HDB9 667 aa9.42□□□□□ -0.9
USP16-202ENST00000399973 CYP26B1Q9NR63 512 aa9.42□□□□□ -0.9
USP16-202ENST00000399973 CHD7Q9P2D1 2997 aa9.42□□□□□ -0.9
USP16-202ENST00000399973 ST3GAL5Q9UNP4 418 aa9.42□□□□□ -0.9
USP16-202ENST00000399973 SQORQ9Y6N5 450 aa9.42□□□□□ -0.9
USP16-202ENST00000399973 TRANK1O15050 2925 aa9.42□□□□□ -0.9
USP16-202ENST00000399973 ENPP3O14638 875 aa9.41□□□□□ -0.9
USP16-202ENST00000399973 GPR182O15218 404 aa9.41□□□□□ -0.9
USP16-202ENST00000399973 MGEA5O60502 916 aa9.41□□□□□ -0.9
USP16-202ENST00000399973 GPR32O75388 356 aa9.41□□□□□ -0.9
USP16-202ENST00000399973 STBD1O95210 358 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms