RNA–Protein interactions for RNA: ENST00000399644.5

CACNA1C-218, Transcript of calcium voltage-gated channel subunit alpha1 C, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,511 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-218	ENST00000399644	ALDH1A1	P00352	501 aa		11.89	□□□□□ -0.51
CACNA1C-218	ENST00000399644	IL9R	Q01113	521 aa		11.89	□□□□□ -0.51
CACNA1C-218	ENST00000399644	BCAS4	Q8TDM0	211 aa		11.89	□□□□□ -0.51
CACNA1C-218	ENST00000399644	CCDC127	Q96BQ5	260 aa		11.89	□□□□□ -0.51
CACNA1C-218	ENST00000399644	TYW1	Q9NV66	732 aa	Known RBP	11.89	□□□□□ -0.51
CACNA1C-218	ENST00000399644	N6AMT1	Q9Y5N5	214 aa		11.89	□□□□□ -0.51
CACNA1C-218	ENST00000399644	GOLGA8K	D6RF30	607 aa		11.89	□□□□□ -0.51
CACNA1C-218	ENST00000399644	ST8SIA6	P61647	398 aa		11.89	□□□□□ -0.51
CACNA1C-218	ENST00000399644	TTLL4	Q14679	1199 aa		11.89	□□□□□ -0.51
CACNA1C-218	ENST00000399644	KRT72	Q14CN4	511 aa		11.89	□□□□□ -0.51
CACNA1C-218	ENST00000399644	TMEM154	Q6P9G4	183 aa		11.89	□□□□□ -0.51
CACNA1C-218	ENST00000399644	FAM178B	Q8IXR5	827 aa		11.89	□□□□□ -0.51
CACNA1C-218	ENST00000399644	RPF1	Q9H9Y2	349 aa	Known RBP	11.89	□□□□□ -0.51
CACNA1C-218	ENST00000399644	TFAM	Q00059	246 aa	Known RBP	11.89	□□□□□ -0.51
CACNA1C-218	ENST00000399644	MESD	Q14696	234 aa		11.89	□□□□□ -0.51
CACNA1C-218	ENST00000399644	TXNRD1	Q16881	649 aa		11.89	□□□□□ -0.51
CACNA1C-218	ENST00000399644	IYD	Q6PHW0	289 aa		11.89	□□□□□ -0.51
CACNA1C-218	ENST00000399644	BRAP	Q7Z569	592 aa		11.89	□□□□□ -0.51
CACNA1C-218	ENST00000399644	LUZP2	Q86TE4	346 aa		11.89	□□□□□ -0.51
CACNA1C-218	ENST00000399644	SDR42E1	Q8WUS8	393 aa		11.89	□□□□□ -0.51
CACNA1C-218	ENST00000399644	MAIP1	Q8WWC4	291 aa		11.89	□□□□□ -0.51
CACNA1C-218	ENST00000399644	DEPDC7	Q96QD5	511 aa		11.89	□□□□□ -0.51
CACNA1C-218	ENST00000399644	GOLGA8R	I6L899	631 aa		11.89	□□□□□ -0.51
CACNA1C-218	ENST00000399644	TRIP4	Q15650	581 aa	Predicted RBP	11.89	□□□□□ -0.51
CACNA1C-218	ENST00000399644	DDI2	Q5TDH0	399 aa		11.89	□□□□□ -0.51
CACNA1C-218	ENST00000399644	PLD3	Q8IV08	490 aa		11.89	□□□□□ -0.51
CACNA1C-218	ENST00000399644	KCTD6	Q8NC69	237 aa		11.89	□□□□□ -0.51
CACNA1C-218	ENST00000399644	TRIM11	Q96F44	468 aa		11.89	□□□□□ -0.51
CACNA1C-218	ENST00000399644	UPF3A	Q9H1J1	476 aa	Known RBP	11.89	□□□□□ -0.51
CACNA1C-218	ENST00000399644	KMT5A	Q9NQR1	393 aa		11.89	□□□□□ -0.51
CACNA1C-218	ENST00000399644	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	11.89	□□□□□ -0.51
CACNA1C-218	ENST00000399644	ADA2	Q9NZK5	511 aa		11.89	□□□□□ -0.51
CACNA1C-218	ENST00000399644	PCDHA12	Q9UN75	941 aa		11.89	□□□□□ -0.51
CACNA1C-218	ENST00000399644	PTPN23	Q9H3S7	1636 aa		11.89	□□□□□ -0.51
CACNA1C-218	ENST00000399644	SCARA5	Q6ZMJ2	495 aa		11.89	□□□□□ -0.51
CACNA1C-218	ENST00000399644	DNAJC5	Q9H3Z4	198 aa		11.89	□□□□□ -0.51
CACNA1C-218	ENST00000399644	UTP6	Q9NYH9	597 aa	Known RBP	11.89	□□□□□ -0.51
CACNA1C-218	ENST00000399644	ARHGAP10	A1A4S6	786 aa		11.88	□□□□□ -0.51
CACNA1C-218	ENST00000399644	HSPA4L	O95757	839 aa		11.88	□□□□□ -0.51
CACNA1C-218	ENST00000399644	TTLL1	O95922	423 aa		11.88	□□□□□ -0.51
CACNA1C-218	ENST00000399644	FOS	P01100	380 aa	Predicted RBP	11.88	□□□□□ -0.51
CACNA1C-218	ENST00000399644	PPP3CC	P48454	512 aa		11.88	□□□□□ -0.51
CACNA1C-218	ENST00000399644	C20orf194	Q5TEA3	1177 aa		11.88	□□□□□ -0.51
CACNA1C-218	ENST00000399644	NIPSNAP3A	Q9UFN0	247 aa	Predicted RBP	11.88	□□□□□ -0.51
CACNA1C-218	ENST00000399644	UBE4B	O95155	1302 aa		11.88	□□□□□ -0.51
CACNA1C-218	ENST00000399644	GOLGA8IP	A6NC78	632 aa		11.88	□□□□□ -0.51
CACNA1C-218	ENST00000399644	NR5A1	Q13285	461 aa		11.88	□□□□□ -0.51
CACNA1C-218	ENST00000399644	SNAPC2	Q13487	334 aa		11.88	□□□□□ -0.51
CACNA1C-218	ENST00000399644	CYTH1	Q15438	398 aa		11.88	□□□□□ -0.51
CACNA1C-218	ENST00000399644	USP17L2	Q6R6M4	530 aa		11.88	□□□□□ -0.51
CACNA1C-218	ENST00000399644	ADCK2	Q7Z695	626 aa		11.88	□□□□□ -0.51
CACNA1C-218	ENST00000399644	PHKB	Q93100	1093 aa		11.88	□□□□□ -0.51
CACNA1C-218	ENST00000399644	ERO1A	Q96HE7	468 aa		11.88	□□□□□ -0.51
CACNA1C-218	ENST00000399644	DESI2	Q9BSY9	194 aa		11.88	□□□□□ -0.51
CACNA1C-218	ENST00000399644	USP17L5	A8MUK1	530 aa		11.88	□□□□□ -0.51
CACNA1C-218	ENST00000399644	PDE1A	P54750	535 aa		11.88	□□□□□ -0.51
CACNA1C-218	ENST00000399644	SHROOM1	Q2M3G4	852 aa	Predicted RBP	11.88	□□□□□ -0.51
CACNA1C-218	ENST00000399644	PMM1	Q92871	262 aa		11.88	□□□□□ -0.51
CACNA1C-218	ENST00000399644	TRIM45	Q9H8W5	580 aa	Predicted RBP	11.88	□□□□□ -0.51
CACNA1C-218	ENST00000399644	RRAGC	Q9HB90	399 aa		11.88	□□□□□ -0.51
CACNA1C-218	ENST00000399644	HOMER3	Q9NSC5	361 aa		11.88	□□□□□ -0.51
CACNA1C-218	ENST00000399644	BLM	P54132	1417 aa	Predicted RBP	11.88	□□□□□ -0.51
CACNA1C-218	ENST00000399644	RSPH10B2	B2RC85	870 aa		11.88	□□□□□ -0.51
CACNA1C-218	ENST00000399644	RSPH10B	P0C881	870 aa		11.88	□□□□□ -0.51
CACNA1C-218	ENST00000399644	RARB	P10826	455 aa		11.88	□□□□□ -0.51
CACNA1C-218	ENST00000399644	PPM1K	Q8N3J5	372 aa		11.88	□□□□□ -0.51
CACNA1C-218	ENST00000399644	TSC1	Q92574	1164 aa		11.88	□□□□□ -0.51
CACNA1C-218	ENST00000399644	COA1	Q9GZY4	146 aa		11.88	□□□□□ -0.51
CACNA1C-218	ENST00000399644	ZFYVE16	Q7Z3T8	1539 aa		11.88	□□□□□ -0.51
CACNA1C-218	ENST00000399644	SYCP2	Q9BX26	1530 aa		11.88	□□□□□ -0.51
CACNA1C-218	ENST00000399644		A0A1B0GW55	424 aa		11.88	□□□□□ -0.51
CACNA1C-218	ENST00000399644	PEX1	O43933	1283 aa		11.88	□□□□□ -0.51
CACNA1C-218	ENST00000399644	APOA1	P02647	267 aa		11.88	□□□□□ -0.51
CACNA1C-218	ENST00000399644	CYBB	P04839	570 aa		11.88	□□□□□ -0.51
CACNA1C-218	ENST00000399644	DUX4L2	P0CJ85	424 aa		11.88	□□□□□ -0.51
CACNA1C-218	ENST00000399644	DUX4L3	P0CJ86	424 aa		11.88	□□□□□ -0.51
CACNA1C-218	ENST00000399644	DUX4L4	P0CJ87	422 aa		11.88	□□□□□ -0.51
CACNA1C-218	ENST00000399644	DUX4L5	P0CJ88	424 aa		11.88	□□□□□ -0.51
CACNA1C-218	ENST00000399644	DUX4L6	P0CJ89	424 aa		11.88	□□□□□ -0.51
CACNA1C-218	ENST00000399644	DUX4L7	P0CJ90	424 aa		11.88	□□□□□ -0.51
CACNA1C-218	ENST00000399644	KRT24	Q2M2I5	525 aa		11.88	□□□□□ -0.51
CACNA1C-218	ENST00000399644	SYDE2	Q5VT97	1194 aa		11.88	□□□□□ -0.51
CACNA1C-218	ENST00000399644	PKN3	Q6P5Z2	889 aa		11.88	□□□□□ -0.51
CACNA1C-218	ENST00000399644	RIN3	Q8TB24	985 aa		11.88	□□□□□ -0.51
CACNA1C-218	ENST00000399644	TESK2	Q96S53	571 aa		11.88	□□□□□ -0.51
CACNA1C-218	ENST00000399644	RUBCNL	Q9H714	662 aa		11.88	□□□□□ -0.51
CACNA1C-218	ENST00000399644	ZWILCH	Q9H900	591 aa		11.88	□□□□□ -0.51
CACNA1C-218	ENST00000399644	KANSL2	Q9H9L4	492 aa		11.88	□□□□□ -0.51
CACNA1C-218	ENST00000399644	AAAS	Q9NRG9	546 aa		11.88	□□□□□ -0.51
CACNA1C-218	ENST00000399644	DUX4	Q9UBX2	424 aa		11.88	□□□□□ -0.51
CACNA1C-218	ENST00000399644	TSPOAP1	O95153	1857 aa		11.88	□□□□□ -0.51
CACNA1C-218	ENST00000399644	TMEM191C	A6NGB0	347 aa		11.87	□□□□□ -0.51
CACNA1C-218	ENST00000399644	SPAG7	O75391	227 aa		11.87	□□□□□ -0.51
CACNA1C-218	ENST00000399644	ASNS	P08243	561 aa		11.87	□□□□□ -0.51
CACNA1C-218	ENST00000399644	PPARG	P37231	505 aa	Predicted RBP	11.87	□□□□□ -0.51
CACNA1C-218	ENST00000399644	MYL5	Q02045	173 aa		11.87	□□□□□ -0.51
CACNA1C-218	ENST00000399644	FAM160B2	Q86V87	743 aa		11.87	□□□□□ -0.51
CACNA1C-218	ENST00000399644	OR6J1	Q8NGC5	347 aa		11.87	□□□□□ -0.51
CACNA1C-218	ENST00000399644	EGFL8	Q99944	293 aa		11.87	□□□□□ -0.51
CACNA1C-218	ENST00000399644	KLRF2	D3W0D1	207 aa		11.87	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms