RNA–Protein interactions for RNA: ENST00000399606.5

CACNA1C-210, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-210ENST00000399606 ADAM9Q13443 819 aa11.75□□□□□ -0.53
CACNA1C-210ENST00000399606 SPOPLQ6IQ16 392 aa11.75□□□□□ -0.53
CACNA1C-210ENST00000399606 UHMK1Q8TAS1 419 aaKnown RBP11.75□□□□□ -0.53
CACNA1C-210ENST00000399606 TMC2Q8TDI7 906 aa11.75□□□□□ -0.53
CACNA1C-210ENST00000399606 TYW1Q9NV66 732 aaKnown RBP11.75□□□□□ -0.53
CACNA1C-210ENST00000399606 FEM1BQ9UK73 627 aa11.75□□□□□ -0.53
CACNA1C-210ENST00000399606 PCDHB8Q9UN66 801 aa11.75□□□□□ -0.53
CACNA1C-210ENST00000399606 TNKSO95271 1327 aa11.75□□□□□ -0.53
CACNA1C-210ENST00000399606 MCF2LO15068 1137 aa11.75□□□□□ -0.53
CACNA1C-210ENST00000399606 ALDH1A3P47895 512 aa11.75□□□□□ -0.53
CACNA1C-210ENST00000399606 CENPAP49450 140 aa11.75□□□□□ -0.53
CACNA1C-210ENST00000399606 C9orf131Q5VYM1 1079 aa11.75□□□□□ -0.53
CACNA1C-210ENST00000399606 SLC25A13Q9UJS0 675 aa11.75□□□□□ -0.53
CACNA1C-210ENST00000399606 TLK1Q9UKI8 766 aa11.75□□□□□ -0.53
CACNA1C-210ENST00000399606 GOLGA8IPA6NC78 632 aa11.75□□□□□ -0.53
CACNA1C-210ENST00000399606 GOLGA8JA6NMD2 632 aa11.75□□□□□ -0.53
CACNA1C-210ENST00000399606 SFSWAPQ12872 951 aaKnown RBP11.75□□□□□ -0.53
CACNA1C-210ENST00000399606 RCN2Q14257 317 aa11.75□□□□□ -0.53
CACNA1C-210ENST00000399606 CAPRIN1Q14444 709 aaKnown RBP11.75□□□□□ -0.53
CACNA1C-210ENST00000399606 UBE2SQ16763 222 aa11.75□□□□□ -0.53
CACNA1C-210ENST00000399606 FOXR1Q6PIV2 292 aa11.75□□□□□ -0.53
CACNA1C-210ENST00000399606 PBRM1Q86U86 1689 aa11.75□□□□□ -0.53
CACNA1C-210ENST00000399606 CLIC2O15247 247 aa11.75□□□□□ -0.53
CACNA1C-210ENST00000399606 ARHGAP6O43182 974 aa11.75□□□□□ -0.53
CACNA1C-210ENST00000399606 ATF2P15336 505 aa11.75□□□□□ -0.53
CACNA1C-210ENST00000399606 DNAJC24Q6P3W2 148 aa11.75□□□□□ -0.53
CACNA1C-210ENST00000399606 PHACTR3Q96KR7 559 aa11.75□□□□□ -0.53
CACNA1C-210ENST00000399606 CENPKQ9BS16 269 aa11.75□□□□□ -0.53
CACNA1C-210ENST00000399606 CAPN10Q9HC96 672 aa11.75□□□□□ -0.53
CACNA1C-210ENST00000399606 HOMER3Q9NSC5 361 aa11.75□□□□□ -0.53
CACNA1C-210ENST00000399606 IPPQ9Y573 584 aa11.75□□□□□ -0.53
CACNA1C-210ENST00000399606 hCG_2014768A0A024R1R8 64 aa11.75□□□□□ -0.53
CACNA1C-210ENST00000399606 KRT1P04264 644 aa11.75□□□□□ -0.53
CACNA1C-210ENST00000399606 CETPP11597 493 aa11.75□□□□□ -0.53
CACNA1C-210ENST00000399606 SCG2P13521 617 aa11.75□□□□□ -0.53
CACNA1C-210ENST00000399606 NME3Q13232 169 aa11.75□□□□□ -0.53
CACNA1C-210ENST00000399606 PAMP19021 973 aa11.74□□□□□ -0.53
CACNA1C-210ENST00000399606 TBL3Q12788 808 aaKnown RBP11.74□□□□□ -0.53
CACNA1C-210ENST00000399606 KRT40Q6A162 431 aa11.74□□□□□ -0.53
CACNA1C-210ENST00000399606 LRRC8CQ8TDW0 803 aa11.74□□□□□ -0.53
CACNA1C-210ENST00000399606 POLR3CQ9BUI4 534 aaPredicted RBP11.74□□□□□ -0.53
CACNA1C-210ENST00000399606 AKAP7Q9P0M2 348 aaPredicted RBP11.74□□□□□ -0.53
CACNA1C-210ENST00000399606 ARHGAP10A1A4S6 786 aa11.74□□□□□ -0.53
CACNA1C-210ENST00000399606 ANP32DO95626 131 aa11.74□□□□□ -0.53
CACNA1C-210ENST00000399606 MTMR1Q13613 665 aa11.74□□□□□ -0.53
CACNA1C-210ENST00000399606 LRRC24Q50LG9 513 aa11.74□□□□□ -0.53
CACNA1C-210ENST00000399606 DEFB128Q7Z7B8 93 aa11.74□□□□□ -0.53
CACNA1C-210ENST00000399606 TAGAPQ8N103 731 aa11.74□□□□□ -0.53
CACNA1C-210ENST00000399606 RNF146Q9NTX7 359 aa11.74□□□□□ -0.53
CACNA1C-210ENST00000399606 A0A1W2PP64 1363 aa11.74□□□□□ -0.53
CACNA1C-210ENST00000399606 USP17L15C9J2P7 530 aa11.74□□□□□ -0.53
CACNA1C-210ENST00000399606 USP17L13C9JLJ4 530 aa11.74□□□□□ -0.53
CACNA1C-210ENST00000399606 USP17L11C9JVI0 530 aa11.74□□□□□ -0.53
CACNA1C-210ENST00000399606 USP17L18D6R9N7 530 aa11.74□□□□□ -0.53
CACNA1C-210ENST00000399606 USP17L22D6RA61 530 aa11.74□□□□□ -0.53
CACNA1C-210ENST00000399606 USP17L17D6RBQ6 530 aa11.74□□□□□ -0.53
CACNA1C-210ENST00000399606 USP17L19D6RCP7 530 aa11.74□□□□□ -0.53
CACNA1C-210ENST00000399606 USP17L20D6RJB6 530 aa11.74□□□□□ -0.53
CACNA1C-210ENST00000399606 PDIA3P30101 505 aaKnown RBP11.74□□□□□ -0.53
CACNA1C-210ENST00000399606 ESRRGP62508 458 aa11.74□□□□□ -0.53
CACNA1C-210ENST00000399606 USP17L24Q0WX57 530 aa11.74□□□□□ -0.53
CACNA1C-210ENST00000399606 SIX5Q8N196 739 aa11.74□□□□□ -0.53
CACNA1C-210ENST00000399606 EGFL8Q99944 293 aa11.74□□□□□ -0.53
CACNA1C-210ENST00000399606 RPAP3Q9H6T3 665 aaPredicted RBP11.74□□□□□ -0.53
CACNA1C-210ENST00000399606 STAP2Q9UGK3 403 aa11.74□□□□□ -0.53
CACNA1C-210ENST00000399606 TRIM17Q9Y577 477 aa11.74□□□□□ -0.53
CACNA1C-210ENST00000399606 CHEK2O96017 543 aa11.74□□□□□ -0.53
CACNA1C-210ENST00000399606 ADORA2BP29275 332 aa11.74□□□□□ -0.53
CACNA1C-210ENST00000399606 PHKA1P46020 1223 aa11.74□□□□□ -0.53
CACNA1C-210ENST00000399606 SCARF1Q14162 830 aa11.74□□□□□ -0.53
CACNA1C-210ENST00000399606 EFHBQ8N7U6 833 aa11.74□□□□□ -0.53
CACNA1C-210ENST00000399606 PIGSQ96S52 555 aa11.74□□□□□ -0.53
CACNA1C-210ENST00000399606 PCDHB9Q9Y5E1 797 aa11.74□□□□□ -0.53
CACNA1C-210ENST00000399606 SEMA3FQ13275 785 aa11.74□□□□□ -0.53
CACNA1C-210ENST00000399606 MAPK6Q16659 721 aa11.74□□□□□ -0.53
CACNA1C-210ENST00000399606 MGAT5BQ3V5L5 792 aa11.74□□□□□ -0.53
CACNA1C-210ENST00000399606 KLC3Q6P597 504 aa11.74□□□□□ -0.53
CACNA1C-210ENST00000399606 SH3BP5LQ7L8J4 393 aa11.74□□□□□ -0.53
CACNA1C-210ENST00000399606 PPWD1Q96BP3 646 aaKnown RBP11.74□□□□□ -0.53
CACNA1C-210ENST00000399606 GDAP1L1Q96MZ0 367 aa11.74□□□□□ -0.53
CACNA1C-210ENST00000399606 ACAP3Q96P50 834 aa11.74□□□□□ -0.53
CACNA1C-210ENST00000399606 MAPK9P45984 424 aa11.73□□□□□ -0.53
CACNA1C-210ENST00000399606 POLR2FP61218 127 aaKnown RBP11.73□□□□□ -0.53
CACNA1C-210ENST00000399606 CCDC15Q0P6D6 951 aa11.73□□□□□ -0.53
CACNA1C-210ENST00000399606 EIF2B5Q13144 721 aaKnown RBP11.73□□□□□ -0.53
CACNA1C-210ENST00000399606 CEP68Q76N32 757 aa11.73□□□□□ -0.53
CACNA1C-210ENST00000399606 GLT1D1Q96MS3 346 aa11.73□□□□□ -0.53
CACNA1C-210ENST00000399606 GAS2L1Q99501 681 aaPredicted RBP11.73□□□□□ -0.53
CACNA1C-210ENST00000399606 ZWILCHQ9H900 591 aa11.73□□□□□ -0.53
CACNA1C-210ENST00000399606 ABCB11O95342 1321 aa11.73□□□□□ -0.53
CACNA1C-210ENST00000399606 TTLL13PA6NNM8 815 aa11.73□□□□□ -0.53
CACNA1C-210ENST00000399606 GPC3P51654 580 aa11.73□□□□□ -0.53
CACNA1C-210ENST00000399606 FOXP4Q8IVH2 680 aaPredicted RBP11.73□□□□□ -0.53
CACNA1C-210ENST00000399606 MYCBPQ99417 103 aaPredicted RBP11.73□□□□□ -0.53
CACNA1C-210ENST00000399606 EPAS1Q99814 870 aa11.73□□□□□ -0.53
CACNA1C-210ENST00000399606 CAPN11Q9UMQ6 739 aa11.73□□□□□ -0.53
CACNA1C-210ENST00000399606 ZFYVE16Q7Z3T8 1539 aa11.73□□□□□ -0.53
CACNA1C-210ENST00000399606 PRAMEF22A3QJZ6 481 aa11.73□□□□□ -0.53
CACNA1C-210ENST00000399606 RAG1P15918 1043 aa11.73□□□□□ -0.53
CACNA1C-210ENST00000399606 ALDH7A1P49419 539 aaKnown RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms