RNA–Protein interactions for RNA: ENST00000399523.5

UFD1-202, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best) BASIC

Gene UFD1, Length 1,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-202ENST00000399523 KIAA1841Q6NSI8 718 aa20.63■□□□□ 0.89
UFD1-202ENST00000399523 CATIPQ7Z7H3 387 aa20.63■□□□□ 0.89
UFD1-202ENST00000399523 PLEKHM2Q8IWE5 1019 aa20.63■□□□□ 0.89
UFD1-202ENST00000399523 FLCNQ8NFG4 579 aa20.63■□□□□ 0.89
UFD1-202ENST00000399523 RMDN1Q96DB5 314 aa20.63■□□□□ 0.89
UFD1-202ENST00000399523 MAP3K14Q99558 947 aa20.63■□□□□ 0.89
UFD1-202ENST00000399523 KCNH7Q9NS40 1196 aa20.63■□□□□ 0.89
UFD1-202ENST00000399523 ATG7O95352 703 aa20.62■□□□□ 0.89
UFD1-202ENST00000399523 PBX3P40426 434 aa20.62■□□□□ 0.89
UFD1-202ENST00000399523 CRYBB1P53674 252 aaPredicted RBP20.62■□□□□ 0.89
UFD1-202ENST00000399523 ATAT1Q5SQI0 421 aa20.62■□□□□ 0.89
UFD1-202ENST00000399523 FAM228AQ86W67 206 aa20.62■□□□□ 0.89
UFD1-202ENST00000399523 LRRC43Q8N309 656 aa20.62■□□□□ 0.89
UFD1-202ENST00000399523 SEMA4AQ9H3S1 761 aa20.62■□□□□ 0.89
UFD1-202ENST00000399523 SEC63Q9UGP8 760 aaKnown RBP20.62■□□□□ 0.89
UFD1-202ENST00000399523 ACACBO00763 2458 aa20.61■□□□□ 0.89
UFD1-202ENST00000399523 IGKV6D-21A0A0A0MT36 114 aa20.61■□□□□ 0.89
UFD1-202ENST00000399523 HBP1O60381 514 aa20.61■□□□□ 0.89
UFD1-202ENST00000399523 EOMESO95936 686 aa20.61■□□□□ 0.89
UFD1-202ENST00000399523 ARP10275 920 aa20.61■□□□□ 0.89
UFD1-202ENST00000399523 SART3Q15020 963 aaKnown RBP20.61■□□□□ 0.89
UFD1-202ENST00000399523 RARS2Q5T160 578 aaKnown RBP20.61■□□□□ 0.89
UFD1-202ENST00000399523 DTWD2Q8NBA8 298 aa20.61■□□□□ 0.89
UFD1-202ENST00000399523 RTP3Q9BQQ7 232 aa20.61■□□□□ 0.89
UFD1-202ENST00000399523 SDF4Q9BRK5 362 aa20.61■□□□□ 0.89
UFD1-202ENST00000399523 IL25Q9H293 177 aa20.61■□□□□ 0.89
UFD1-202ENST00000399523 CYP26B1Q9NR63 512 aa20.61■□□□□ 0.89
UFD1-202ENST00000399523 DZANK1Q9NVP4 752 aa20.61■□□□□ 0.89
UFD1-202ENST00000399523 DBR1Q9UK59 544 aaKnown RBP20.61■□□□□ 0.89
UFD1-202ENST00000399523 SPDYE3A6NKU9 549 aa20.6■□□□□ 0.89
UFD1-202ENST00000399523 DGLUCYQ7Z3D6 616 aa20.6■□□□□ 0.89
UFD1-202ENST00000399523 SLC39A11Q8N1S5 342 aa20.6■□□□□ 0.89
UFD1-202ENST00000399523 C12orf76Q8N812 135 aaPredicted RBP20.6■□□□□ 0.89
UFD1-202ENST00000399523 IGDCC4Q8TDY8 1250 aa20.6■□□□□ 0.89
UFD1-202ENST00000399523 MXRA8Q9BRK3 442 aa20.6■□□□□ 0.89
UFD1-202ENST00000399523 LZTS2Q9BRK4 669 aa20.6■□□□□ 0.89
UFD1-202ENST00000399523 PCDHA6Q9UN73 950 aa20.6■□□□□ 0.89
UFD1-202ENST00000399523 PCDHA8Q9Y5H6 950 aa20.6■□□□□ 0.89
UFD1-202ENST00000399523 COL1A2P08123 1366 aa20.59■□□□□ 0.89
UFD1-202ENST00000399523 SPTBN2O15020 2390 aa20.59■□□□□ 0.89
UFD1-202ENST00000399523 DENND4AQ7Z401 1863 aa20.59■□□□□ 0.89
UFD1-202ENST00000399523 ZBTB42B2RXF5 422 aa20.59■□□□□ 0.89
UFD1-202ENST00000399523 LMNAP02545 664 aaKnown RBP20.59■□□□□ 0.89
UFD1-202ENST00000399523 CYP21A2P08686 494 aa20.59■□□□□ 0.89
UFD1-202ENST00000399523 KIF5BP33176 963 aa20.59■□□□□ 0.89
UFD1-202ENST00000399523 UBE2SQ16763 222 aa20.59■□□□□ 0.89
UFD1-202ENST00000399523 KIZQ2M2Z5 673 aa20.59■□□□□ 0.89
UFD1-202ENST00000399523 CYP2W1Q8TAV3 490 aa20.59■□□□□ 0.89
UFD1-202ENST00000399523 OSMRQ99650 979 aa20.59■□□□□ 0.89
UFD1-202ENST00000399523 U3KPZ7 1027 aaPredicted RBP20.59■□□□□ 0.89
UFD1-202ENST00000399523 KMT2BQ9UMN6 2715 aaPredicted RBP20.59■□□□□ 0.89
UFD1-202ENST00000399523 GPR32O75388 356 aa20.58■□□□□ 0.89
UFD1-202ENST00000399523 CXCL14O95715 111 aa20.58■□□□□ 0.89
UFD1-202ENST00000399523 ITGB3BPQ13352 177 aaPredicted RBP20.58■□□□□ 0.89
UFD1-202ENST00000399523 TDGQ13569 410 aa20.58■□□□□ 0.89
UFD1-202ENST00000399523 ZNF484Q5JVG2 852 aa20.58■□□□□ 0.89
UFD1-202ENST00000399523 KANK3Q6NY19 840 aa20.58■□□□□ 0.89
UFD1-202ENST00000399523 ABI1Q8IZP0 508 aa20.58■□□□□ 0.89
UFD1-202ENST00000399523 CTCFLQ8NI51 663 aaPredicted RBP20.58■□□□□ 0.89
UFD1-202ENST00000399523 IRAK3Q9Y616 596 aa20.58■□□□□ 0.89
UFD1-202ENST00000399523 DDAH1O94760 285 aa20.57■□□□□ 0.88
UFD1-202ENST00000399523 PUM1Q14671 1186 aaKnown RBP eCLIP20.57■□□□□ 0.88
UFD1-202ENST00000399523 BMS1Q14692 1282 aaKnown RBP20.57■□□□□ 0.88
UFD1-202ENST00000399523 RALYLQ86SE5 291 aaKnown RBP20.57■□□□□ 0.88
UFD1-202ENST00000399523 ECHDC2Q86YB7 292 aa20.57■□□□□ 0.88
UFD1-202ENST00000399523 SMC5Q8IY18 1101 aa20.57■□□□□ 0.88
UFD1-202ENST00000399523 SRBD1Q8N5C6 995 aaKnown RBP20.57■□□□□ 0.88
UFD1-202ENST00000399523 NCOA7Q8NI08 942 aa20.57■□□□□ 0.88
UFD1-202ENST00000399523 KCNG4Q8TDN1 519 aa20.57■□□□□ 0.88
UFD1-202ENST00000399523 SLC22A17Q8WUG5 538 aa20.57■□□□□ 0.88
UFD1-202ENST00000399523 DUSP12Q9UNI6 340 aa20.57■□□□□ 0.88
UFD1-202ENST00000399523 GPR179Q6PRD1 2367 aa20.57■□□□□ 0.88
UFD1-202ENST00000399523 GNAQP50148 359 aa20.56■□□□□ 0.88
UFD1-202ENST00000399523 ANTXR2P58335 489 aa20.56■□□□□ 0.88
UFD1-202ENST00000399523 CLLU1OSQ5K130 101 aa20.56■□□□□ 0.88
UFD1-202ENST00000399523 ABHD15Q6UXT9 468 aa20.56■□□□□ 0.88
UFD1-202ENST00000399523 OTOP3Q7RTS5 596 aa20.56■□□□□ 0.88
UFD1-202ENST00000399523 ZNF654Q8IZM8 581 aa20.56■□□□□ 0.88
UFD1-202ENST00000399523 ACSF2Q96CM8 615 aaPredicted RBP20.56■□□□□ 0.88
UFD1-202ENST00000399523 PPP1R16BQ96T49 567 aa20.56■□□□□ 0.88
UFD1-202ENST00000399523 MYL10Q9BUA6 226 aa20.56■□□□□ 0.88
UFD1-202ENST00000399523 AGO4Q9HCK5 861 aaKnown RBP20.56■□□□□ 0.88
UFD1-202ENST00000399523 TAF6LQ9Y6J9 622 aa20.56■□□□□ 0.88
UFD1-202ENST00000399523 E7EWF7 191 aa20.55■□□□□ 0.88
UFD1-202ENST00000399523 PLEKHA8P1O95397 391 aa20.55■□□□□ 0.88
UFD1-202ENST00000399523 C22orf31O95567 290 aa20.55■□□□□ 0.88
UFD1-202ENST00000399523 CCNE2O96020 404 aa20.55■□□□□ 0.88
UFD1-202ENST00000399523 VTNP04004 478 aa20.55■□□□□ 0.88
UFD1-202ENST00000399523 EPCAMP16422 314 aa20.55■□□□□ 0.88
UFD1-202ENST00000399523 FAM160B1Q5W0V3 765 aa20.55■□□□□ 0.88
UFD1-202ENST00000399523 CHD1LQ86WJ1 897 aa20.55■□□□□ 0.88
UFD1-202ENST00000399523 KIAA2013Q8IYS2 634 aa20.55■□□□□ 0.88
UFD1-202ENST00000399523 SIX5Q8N196 739 aa20.55■□□□□ 0.88
UFD1-202ENST00000399523 ZBP1Q9H171 429 aa20.55■□□□□ 0.88
UFD1-202ENST00000399523 KCNK12Q9HB15 430 aa20.55■□□□□ 0.88
UFD1-202ENST00000399523 FBXL21Q9UKT6 434 aa20.55■□□□□ 0.88
UFD1-202ENST00000399523 BACH1O14867 736 aa20.54■□□□□ 0.88
UFD1-202ENST00000399523 ZSCAN20P17040 1043 aaPredicted RBP20.54■□□□□ 0.88
UFD1-202ENST00000399523 ATP4AP20648 1035 aa20.54■□□□□ 0.88
UFD1-202ENST00000399523 ALDH7A1P49419 539 aaKnown RBP20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms