RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 RTN4RL1Q86UN2 441 aaPredicted RBP16.72■□□□□ 0.27
SMIM11A-203ENST00000399299 POTEDQ86YR6 584 aa16.72■□□□□ 0.27
SMIM11A-203ENST00000399299 NPAS4Q8IUM7 802 aa16.72■□□□□ 0.27
SMIM11A-203ENST00000399299 SLFN12Q8IYM2 578 aa16.72■□□□□ 0.27
SMIM11A-203ENST00000399299 MICALL1Q8N3F8 863 aa16.72■□□□□ 0.27
SMIM11A-203ENST00000399299 FIBCD1Q8N539 461 aa16.72■□□□□ 0.27
SMIM11A-203ENST00000399299 FBXO22Q8NEZ5 403 aa16.72■□□□□ 0.27
SMIM11A-203ENST00000399299 GDPD5Q8WTR4 605 aa16.72■□□□□ 0.27
SMIM11A-203ENST00000399299 TMEM40Q8WWA1 233 aa16.72■□□□□ 0.27
SMIM11A-203ENST00000399299 ATXN2LQ8WWM7 1075 aaKnown RBP16.72■□□□□ 0.27
SMIM11A-203ENST00000399299 HAS1Q92839 578 aa16.72■□□□□ 0.27
SMIM11A-203ENST00000399299 ZNF689Q96CS4 500 aaPredicted RBP16.72■□□□□ 0.27
SMIM11A-203ENST00000399299 TMX1Q9H3N1 280 aa16.72■□□□□ 0.27
SMIM11A-203ENST00000399299 SH2B1Q9NRF2 756 aaPredicted RBP16.72■□□□□ 0.27
SMIM11A-203ENST00000399299 SEPT9Q9UHD8 586 aaPredicted RBP16.72■□□□□ 0.27
SMIM11A-203ENST00000399299 BTBD18B2RXH4 712 aa16.71■□□□□ 0.27
SMIM11A-203ENST00000399299 EML1O00423 815 aa16.71■□□□□ 0.27
SMIM11A-203ENST00000399299 GPR182O15218 404 aa16.71■□□□□ 0.27
SMIM11A-203ENST00000399299 DGKIO75912 1065 aa16.71■□□□□ 0.27
SMIM11A-203ENST00000399299 TMEM266Q2M3C6 531 aa16.71■□□□□ 0.27
SMIM11A-203ENST00000399299 EPC2Q52LR7 807 aa16.71■□□□□ 0.27
SMIM11A-203ENST00000399299 CCDC83Q8IWF9 413 aa16.71■□□□□ 0.27
SMIM11A-203ENST00000399299 LRRC71Q8N4P6 559 aa16.71■□□□□ 0.27
SMIM11A-203ENST00000399299 IL27Q8NEV9 243 aa16.71■□□□□ 0.27
SMIM11A-203ENST00000399299 CEP89Q96ST8 783 aa16.71■□□□□ 0.27
SMIM11A-203ENST00000399299 OSMRQ99650 979 aa16.71■□□□□ 0.27
SMIM11A-203ENST00000399299 PRDM6Q9NQX0 595 aa16.71■□□□□ 0.27
SMIM11A-203ENST00000399299 RNF216Q9NWF9 866 aaPredicted RBP16.71■□□□□ 0.27
SMIM11A-203ENST00000399299 AKT3Q9Y243 479 aa16.71■□□□□ 0.27
SMIM11A-203ENST00000399299 RWDD3Q9Y3V2 267 aa16.71■□□□□ 0.27
SMIM11A-203ENST00000399299 IGKV6-21A0A0C4DH24 114 aa16.7■□□□□ 0.26
SMIM11A-203ENST00000399299 BAG4O95429 457 aaKnown RBP16.7■□□□□ 0.26
SMIM11A-203ENST00000399299 P4HBP07237 508 aaKnown RBP16.7■□□□□ 0.26
SMIM11A-203ENST00000399299 STAG3L1P0CL83 205 aa16.7■□□□□ 0.26
SMIM11A-203ENST00000399299 QARSP47897 775 aaKnown RBP16.7■□□□□ 0.26
SMIM11A-203ENST00000399299 SARSP49591 514 aaKnown RBP16.7■□□□□ 0.26
SMIM11A-203ENST00000399299 NLRP11P59045 1033 aaKnown RBP16.7■□□□□ 0.26
SMIM11A-203ENST00000399299 HMGN5P82970 282 aaKnown RBP16.7■□□□□ 0.26
SMIM11A-203ENST00000399299 SPIRE1Q08AE8 756 aa16.7■□□□□ 0.26
SMIM11A-203ENST00000399299 NFX1Q12986 1120 aaKnown RBP16.7■□□□□ 0.26
SMIM11A-203ENST00000399299 TJAP1Q5JTD0 557 aa16.7■□□□□ 0.26
SMIM11A-203ENST00000399299 FAM228AQ86W67 206 aa16.7■□□□□ 0.26
SMIM11A-203ENST00000399299 TMEM192Q8IY95 271 aa16.7■□□□□ 0.26
SMIM11A-203ENST00000399299 BANK1Q8NDB2 785 aa16.7■□□□□ 0.26
SMIM11A-203ENST00000399299 SYMPKQ92797 1274 aaKnown RBP16.7■□□□□ 0.26
SMIM11A-203ENST00000399299 CLP1Q92989 425 aaKnown RBP16.7■□□□□ 0.26
SMIM11A-203ENST00000399299 COL25A1Q9BXS0 654 aaPredicted RBP16.7■□□□□ 0.26
SMIM11A-203ENST00000399299 ADAMTS10Q9H324 1103 aa16.7■□□□□ 0.26
SMIM11A-203ENST00000399299 C1orf112Q9NSG2 853 aa16.7■□□□□ 0.26
SMIM11A-203ENST00000399299 ST3GAL5Q9UNP4 418 aa16.7■□□□□ 0.26
SMIM11A-203ENST00000399299 PPME1Q9Y570 386 aa16.7■□□□□ 0.26
SMIM11A-203ENST00000399299 SPTBN5Q9NRC6 3674 aaKnown RBP16.7■□□□□ 0.26
SMIM11A-203ENST00000399299 ARID2Q68CP9 1835 aa16.69■□□□□ 0.26
SMIM11A-203ENST00000399299 KIAA1671Q9BY89 1806 aa16.69■□□□□ 0.26
SMIM11A-203ENST00000399299 C5orf67F2Z3F1 127 aa16.69■□□□□ 0.26
SMIM11A-203ENST00000399299 H3BNC9 293 aa16.69■□□□□ 0.26
SMIM11A-203ENST00000399299 MARCH6O60337 910 aa16.69■□□□□ 0.26
SMIM11A-203ENST00000399299 LINC00271P0C7V0 271 aa16.69■□□□□ 0.26
SMIM11A-203ENST00000399299 GPC3P51654 580 aa16.69■□□□□ 0.26
SMIM11A-203ENST00000399299 CDC42EP1Q00587 391 aa16.69■□□□□ 0.26
SMIM11A-203ENST00000399299 RABEP1Q15276 862 aa16.69■□□□□ 0.26
SMIM11A-203ENST00000399299 EPHA7Q15375 998 aa16.69■□□□□ 0.26
SMIM11A-203ENST00000399299 SAFBQ15424 915 aaKnown RBP eCLIP16.69■□□□□ 0.26
SMIM11A-203ENST00000399299 MTERF2Q49AM1 385 aa16.69■□□□□ 0.26
SMIM11A-203ENST00000399299 ANO5Q75V66 913 aa16.69■□□□□ 0.26
SMIM11A-203ENST00000399299 CMTR2Q8IYT2 770 aaKnown RBP16.69■□□□□ 0.26
SMIM11A-203ENST00000399299 PPP1R16BQ96T49 567 aa16.69■□□□□ 0.26
SMIM11A-203ENST00000399299 RGS18Q9NS28 235 aa16.69■□□□□ 0.26
SMIM11A-203ENST00000399299 BDP1A6H8Y1 2624 aa16.69■□□□□ 0.26
SMIM11A-203ENST00000399299 XIRP2A4UGR9 3374 aa16.69■□□□□ 0.26
SMIM11A-203ENST00000399299 BRWD1Q9NSI6 2320 aa16.68■□□□□ 0.26
SMIM11A-203ENST00000399299 FNDC1Q4ZHG4 1894 aaPredicted RBP16.68■□□□□ 0.26
SMIM11A-203ENST00000399299 DENND3A2RUS2 1198 aa16.68■□□□□ 0.26
SMIM11A-203ENST00000399299 TMEM150BA6NC51 233 aa16.68■□□□□ 0.26
SMIM11A-203ENST00000399299 DDX11L8A8MPP1 907 aa16.68■□□□□ 0.26
SMIM11A-203ENST00000399299 MGEA5O60502 916 aa16.68■□□□□ 0.26
SMIM11A-203ENST00000399299 MAFO75444 373 aaPredicted RBP16.68■□□□□ 0.26
SMIM11A-203ENST00000399299 RB1P06400 928 aa16.68■□□□□ 0.26
SMIM11A-203ENST00000399299 EIF4BP23588 611 aaKnown RBP16.68■□□□□ 0.26
SMIM11A-203ENST00000399299 FOSBP53539 338 aa16.68■□□□□ 0.26
SMIM11A-203ENST00000399299 BTG3Q14201 252 aaPredicted RBP16.68■□□□□ 0.26
SMIM11A-203ENST00000399299 SLC24A5Q71RS6 500 aa16.68■□□□□ 0.26
SMIM11A-203ENST00000399299 C4orf19Q8IY42 314 aa16.68■□□□□ 0.26
SMIM11A-203ENST00000399299 MRPL38Q96DV4 380 aaKnown RBP16.68■□□□□ 0.26
SMIM11A-203ENST00000399299 C8orf76Q96K31 380 aa16.68■□□□□ 0.26
SMIM11A-203ENST00000399299 ADAM2Q99965 735 aa16.68■□□□□ 0.26
SMIM11A-203ENST00000399299 JPH2Q9BR39 696 aaPredicted RBP16.68■□□□□ 0.26
SMIM11A-203ENST00000399299 NCOR1O75376 2440 aa16.68■□□□□ 0.26
SMIM11A-203ENST00000399299 C9IYK1 514 aa16.67■□□□□ 0.26
SMIM11A-203ENST00000399299 NEMFO60524 1076 aa16.67■□□□□ 0.26
SMIM11A-203ENST00000399299 DARSP14868 501 aaKnown RBP16.67■□□□□ 0.26
SMIM11A-203ENST00000399299 BMPR1AP36894 532 aa16.67■□□□□ 0.26
SMIM11A-203ENST00000399299 DNM2P50570 870 aa16.67■□□□□ 0.26
SMIM11A-203ENST00000399299 MRPS5P82675 430 aaKnown RBP16.67■□□□□ 0.26
SMIM11A-203ENST00000399299 GPM6BQ13491 265 aa16.67■□□□□ 0.26
SMIM11A-203ENST00000399299 DSC3Q14574 896 aa16.67■□□□□ 0.26
SMIM11A-203ENST00000399299 CALCRLQ16602 461 aa16.67■□□□□ 0.26
SMIM11A-203ENST00000399299 PTPROQ16827 1216 aa16.67■□□□□ 0.26
SMIM11A-203ENST00000399299 EXOC8Q8IYI6 725 aa16.67■□□□□ 0.26
SMIM11A-203ENST00000399299 FBXO18Q8NFZ0 1043 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms