RNA–Protein interactions for RNA: ENST00000398958.6

RCC1-204, Transcript of regulator of chromosome condensation 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RCC1, Length 2,715 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-204ENST00000398958 CFAP58Q5T655 872 aa12.36□□□□□ -0.43
RCC1-204ENST00000398958 SFR1Q86XK3 245 aa12.36□□□□□ -0.43
RCC1-204ENST00000398958 DCAF4Q8WV16 495 aa12.36□□□□□ -0.43
RCC1-204ENST00000398958 SCFD1Q8WVM8 642 aa12.36□□□□□ -0.43
RCC1-204ENST00000398958 RUBCNQ92622 972 aa12.36□□□□□ -0.43
RCC1-204ENST00000398958 CCDC43Q96MW1 224 aaKnown RBP12.36□□□□□ -0.43
RCC1-204ENST00000398958 WDR11Q9BZH6 1224 aa12.36□□□□□ -0.43
RCC1-204ENST00000398958 CENPHQ9H3R5 247 aa12.36□□□□□ -0.43
RCC1-204ENST00000398958 RPAP3Q9H6T3 665 aaPredicted RBP12.36□□□□□ -0.43
RCC1-204ENST00000398958 MAGEF1Q9HAY2 307 aa12.36□□□□□ -0.43
RCC1-204ENST00000398958 GOPCQ9HD26 462 aa12.36□□□□□ -0.43
RCC1-204ENST00000398958 KCNMB3Q9NPA1 279 aa12.36□□□□□ -0.43
RCC1-204ENST00000398958 COL20A1Q9P218 1284 aa12.36□□□□□ -0.43
RCC1-204ENST00000398958 POTEJP0CG39 1038 aa12.35□□□□□ -0.43
RCC1-204ENST00000398958 C8orf74Q6P047 294 aa12.35□□□□□ -0.43
RCC1-204ENST00000398958 CACNA2D4Q7Z3S7 1137 aa12.35□□□□□ -0.43
RCC1-204ENST00000398958 FAM114A1Q8IWE2 563 aa12.35□□□□□ -0.43
RCC1-204ENST00000398958 DHX37Q8IY37 1157 aaKnown RBP12.35□□□□□ -0.43
RCC1-204ENST00000398958 GUF1Q8N442 669 aaKnown RBP12.35□□□□□ -0.43
RCC1-204ENST00000398958 ZNF473Q8WTR7 871 aaKnown RBP12.35□□□□□ -0.43
RCC1-204ENST00000398958 CAVIN3Q969G5 261 aa12.35□□□□□ -0.43
RCC1-204ENST00000398958 MKL1Q969V6 931 aa12.35□□□□□ -0.43
RCC1-204ENST00000398958 LENG9Q96B70 501 aa12.35□□□□□ -0.43
RCC1-204ENST00000398958 REEP2Q9BRK0 252 aa12.35□□□□□ -0.43
RCC1-204ENST00000398958 NUP58Q9BVL2 599 aa12.35□□□□□ -0.43
RCC1-204ENST00000398958 RUSC1Q9BVN2 902 aa12.35□□□□□ -0.43
RCC1-204ENST00000398958 EPN3Q9H201 632 aa12.35□□□□□ -0.43
RCC1-204ENST00000398958 EMILIN3Q9NT22 766 aa12.35□□□□□ -0.43
RCC1-204ENST00000398958 SIK3Q9Y2K2 1263 aa12.35□□□□□ -0.43
RCC1-204ENST00000398958 USP20Q9Y2K6 914 aa12.35□□□□□ -0.43
RCC1-204ENST00000398958 ARFGEF1Q9Y6D6 1849 aa12.35□□□□□ -0.43
RCC1-204ENST00000398958 PVALEFA0A1B0GWK0 134 aa12.35□□□□□ -0.43
RCC1-204ENST00000398958 TESPA1A2RU30 521 aaPredicted RBP12.35□□□□□ -0.43
RCC1-204ENST00000398958 CHUKO15111 745 aa12.35□□□□□ -0.43
RCC1-204ENST00000398958 AKR1B10O60218 316 aa12.35□□□□□ -0.43
RCC1-204ENST00000398958 SPATA31C1P0DKV0 1188 aa12.35□□□□□ -0.43
RCC1-204ENST00000398958 YBX3P16989 372 aaKnown RBP eCLIP12.35□□□□□ -0.434e-7■■□□□ 12
RCC1-204ENST00000398958 IBSPP21815 317 aaPredicted RBP12.35□□□□□ -0.43
RCC1-204ENST00000398958 PAFAH1B1P43034 410 aa12.35□□□□□ -0.43
RCC1-204ENST00000398958 SEC24CP53992 1094 aa12.35□□□□□ -0.43
RCC1-204ENST00000398958 POLR2FP61218 127 aaKnown RBP12.35□□□□□ -0.43
RCC1-204ENST00000398958 HDLBPQ00341 1268 aaKnown RBP12.35□□□□□ -0.43
RCC1-204ENST00000398958 ITIH3Q06033 890 aa12.35□□□□□ -0.43
RCC1-204ENST00000398958 GRIPAP1Q4V328 841 aa12.35□□□□□ -0.43
RCC1-204ENST00000398958 RDH13Q8NBN7 331 aa12.35□□□□□ -0.43
RCC1-204ENST00000398958 ETNPPLQ8TBG4 499 aa12.35□□□□□ -0.43
RCC1-204ENST00000398958 CLMNQ96JQ2 1002 aa12.35□□□□□ -0.43
RCC1-204ENST00000398958 TEPSINQ96N21 525 aa12.35□□□□□ -0.43
RCC1-204ENST00000398958 VCPKMTQ9H867 229 aa12.35□□□□□ -0.43
RCC1-204ENST00000398958 A1CFQ9NQ94 594 aaKnown RBP12.35□□□□□ -0.43
RCC1-204ENST00000398958 HYOU1Q9Y4L1 999 aa12.35□□□□□ -0.43
RCC1-204ENST00000398958 KIF13BQ9NQT8 1826 aa12.34□□□□□ -0.43
RCC1-204ENST00000398958 SPIRE1Q08AE8 756 aa12.34□□□□□ -0.43
RCC1-204ENST00000398958 IFT88Q13099 833 aa12.34□□□□□ -0.43
RCC1-204ENST00000398958 ADAM9Q13443 819 aa12.34□□□□□ -0.43
RCC1-204ENST00000398958 MAN2A1Q16706 1144 aa12.34□□□□□ -0.43
RCC1-204ENST00000398958 PPP1R18Q6NYC8 613 aa12.34□□□□□ -0.43
RCC1-204ENST00000398958 KDM7AQ6ZMT4 941 aa12.34□□□□□ -0.43
RCC1-204ENST00000398958 ZNF572Q7Z3I7 529 aaPredicted RBP12.34□□□□□ -0.43
RCC1-204ENST00000398958 TSG101Q99816 390 aa12.34□□□□□ -0.43
RCC1-204ENST00000398958 PAGR1Q9BTK6 254 aa12.34□□□□□ -0.43
RCC1-204ENST00000398958 WDR18Q9BV38 432 aa12.34□□□□□ -0.43
RCC1-204ENST00000398958 LSM14BQ9BX40 385 aaKnown RBP12.34□□□□□ -0.43
RCC1-204ENST00000398958 IFIH1Q9BYX4 1025 aaKnown RBP12.34□□□□□ -0.43
RCC1-204ENST00000398958 SALL4Q9UJQ4 1053 aa12.34□□□□□ -0.43
RCC1-204ENST00000398958 TMX2Q9Y320 296 aa12.34□□□□□ -0.43
RCC1-204ENST00000398958 TCP1P17987 556 aaKnown RBP12.34□□□□□ -0.43
RCC1-204ENST00000398958 SOX10P56693 466 aa12.34□□□□□ -0.43
RCC1-204ENST00000398958 RNASE9P60153 205 aaKnown RBP12.34□□□□□ -0.43
RCC1-204ENST00000398958 ZC2HC1CQ53FD0 456 aaPredicted RBP12.34□□□□□ -0.43
RCC1-204ENST00000398958 DCAF17Q5H9S7 520 aaPredicted RBP12.34□□□□□ -0.43
RCC1-204ENST00000398958 TCERG1LQ5VWI1 586 aa12.34□□□□□ -0.43
RCC1-204ENST00000398958 AGBL3Q8NEM8 1001 aa12.34□□□□□ -0.43
RCC1-204ENST00000398958 PPP1R13LQ8WUF5 828 aa12.34□□□□□ -0.43
RCC1-204ENST00000398958 IFT81Q8WYA0 676 aa12.34□□□□□ -0.43
RCC1-204ENST00000398958 SH2D4AQ9H788 454 aa12.34□□□□□ -0.43
RCC1-204ENST00000398958 KLC4Q9NSK0 619 aa12.34□□□□□ -0.43
RCC1-204ENST00000398958 HERC5Q9UII4 1024 aaKnown RBP12.34□□□□□ -0.43
RCC1-204ENST00000398958 NFU1Q9UMS0 254 aa12.34□□□□□ -0.43
RCC1-204ENST00000398958 PHF20L1A8MW92 1017 aa12.33□□□□□ -0.44
RCC1-204ENST00000398958 KIF1CO43896 1103 aaKnown RBP12.33□□□□□ -0.44
RCC1-204ENST00000398958 PPP1R37O75864 691 aa12.33□□□□□ -0.44
RCC1-204ENST00000398958 VCAM1P19320 739 aa12.33□□□□□ -0.44
RCC1-204ENST00000398958 NR1D1P20393 614 aa12.33□□□□□ -0.44
RCC1-204ENST00000398958 CARSP49589 748 aaKnown RBP12.33□□□□□ -0.44
RCC1-204ENST00000398958 CASP4P49662 377 aa12.33□□□□□ -0.44
RCC1-204ENST00000398958 KIF11P52732 1056 aa12.33□□□□□ -0.44
RCC1-204ENST00000398958 SLC12A3P55017 1021 aa12.33□□□□□ -0.44
RCC1-204ENST00000398958 EHHADHQ08426 723 aa12.33□□□□□ -0.44
RCC1-204ENST00000398958 PTGISQ16647 500 aa12.33□□□□□ -0.44
RCC1-204ENST00000398958 RPAINQ86UA6 219 aa12.33□□□□□ -0.44
RCC1-204ENST00000398958 RETREG2Q8NC44 543 aa12.33□□□□□ -0.44
RCC1-204ENST00000398958 CCT8L2Q96SF2 557 aa12.33□□□□□ -0.44
RCC1-204ENST00000398958 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.33□□□□□ -0.44
RCC1-204ENST00000398958 RBM12Q9NTZ6 932 aaKnown RBP12.33□□□□□ -0.44
RCC1-204ENST00000398958 PCDHA13Q9Y5I0 950 aa12.33□□□□□ -0.44
RCC1-204ENST00000398958 COL4A3BPQ9Y5P4 624 aa12.33□□□□□ -0.44
RCC1-204ENST00000398958 POLR2AP24928 1970 aaKnown RBP12.33□□□□□ -0.44
RCC1-204ENST00000398958 ZNF233A6NK53 670 aa12.33□□□□□ -0.44
RCC1-204ENST00000398958 ASNSP08243 561 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms