RNA–Protein interactions for RNA: ENST00000398868.7

ATL3-201, Transcript of atlastin GTPase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATL3, Length 7,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-201ENST00000398868 OTULINQ96BN8 352 aa10.02□□□□□ -0.8
ATL3-201ENST00000398868 ZCCHC17Q9NP64 241 aaKnown RBP10.02□□□□□ -0.8
ATL3-201ENST00000398868 CPP00450 1065 aa10.02□□□□□ -0.81
ATL3-201ENST00000398868 PSMC2P35998 433 aaKnown RBP10.02□□□□□ -0.81
ATL3-201ENST00000398868 ARID5BQ14865 1188 aa10.02□□□□□ -0.81
ATL3-201ENST00000398868 SLMAPQ14BN4 828 aa10.02□□□□□ -0.81
ATL3-201ENST00000398868 DEPDC1BQ8WUY9 529 aa10.02□□□□□ -0.81
ATL3-201ENST00000398868 OSBPL1AQ9BXW6 950 aa10.02□□□□□ -0.81
ATL3-201ENST00000398868 KLHL11Q9NVR0 708 aa10.02□□□□□ -0.81
ATL3-201ENST00000398868 PCDHA6Q9UN73 950 aa10.02□□□□□ -0.81
ATL3-201ENST00000398868 PCDHA8Q9Y5H6 950 aa10.02□□□□□ -0.81
ATL3-201ENST00000398868 EPN1Q9Y6I3 576 aaPredicted RBP10.02□□□□□ -0.81
ATL3-201ENST00000398868 PEG3Q9GZU2 1588 aa10.02□□□□□ -0.81
ATL3-201ENST00000398868 ZFYVE16Q7Z3T8 1539 aa10.02□□□□□ -0.81
ATL3-201ENST00000398868 MAGEA9P43362 315 aa10.02□□□□□ -0.81
ATL3-201ENST00000398868 ASPRV1Q53RT3 343 aa10.02□□□□□ -0.81
ATL3-201ENST00000398868 MAP7D3Q8IWC1 876 aa10.02□□□□□ -0.81
ATL3-201ENST00000398868 CACTINQ8WUQ7 758 aaKnown RBP10.02□□□□□ -0.81
ATL3-201ENST00000398868 TUBGCP2Q9BSJ2 902 aa10.02□□□□□ -0.81
ATL3-201ENST00000398868 COG4Q9H9E3 785 aa10.02□□□□□ -0.81
ATL3-201ENST00000398868 WARS2Q9UGM6 360 aaKnown RBP10.02□□□□□ -0.81
ATL3-201ENST00000398868 CFAP69A5D8W1 941 aa10.02□□□□□ -0.81
ATL3-201ENST00000398868 CYP21A2P08686 494 aa10.02□□□□□ -0.81
ATL3-201ENST00000398868 SPOPLQ6IQ16 392 aa10.02□□□□□ -0.81
ATL3-201ENST00000398868 OR6J1Q8NGC5 347 aa10.02□□□□□ -0.81
ATL3-201ENST00000398868 SMAD5Q99717 465 aaKnown RBP10.02□□□□□ -0.81
ATL3-201ENST00000398868 DDX28Q9NUL7 540 aaKnown RBP10.02□□□□□ -0.81
ATL3-201ENST00000398868 CNOT7Q9UIV1 285 aaKnown RBP10.02□□□□□ -0.81
ATL3-201ENST00000398868 PNMA3Q9UL41 463 aa10.02□□□□□ -0.81
ATL3-201ENST00000398868 CCDC195A0A1B0GUA6 201 aa10.02□□□□□ -0.81
ATL3-201ENST00000398868 PPP2R5BQ15173 497 aa10.02□□□□□ -0.81
ATL3-201ENST00000398868 OLFML2BQ68BL8 750 aa10.02□□□□□ -0.81
ATL3-201ENST00000398868 ZNF746Q6NUN9 644 aaPredicted RBP10.02□□□□□ -0.81
ATL3-201ENST00000398868 IPO11Q9UI26 975 aaKnown RBP10.02□□□□□ -0.81
ATL3-201ENST00000398868 DFFAO00273 331 aa10.01□□□□□ -0.81
ATL3-201ENST00000398868 GPC4O75487 556 aa10.01□□□□□ -0.81
ATL3-201ENST00000398868 SH3BGRP55822 239 aaPredicted RBP10.01□□□□□ -0.81
ATL3-201ENST00000398868 TXNRD1Q16881 649 aa10.01□□□□□ -0.81
ATL3-201ENST00000398868 DNAJC24Q6P3W2 148 aa10.01□□□□□ -0.81
ATL3-201ENST00000398868 CCDC90BQ9GZT6 254 aa10.01□□□□□ -0.81
ATL3-201ENST00000398868 TTC7AQ9ULT0 858 aaPredicted RBP10.01□□□□□ -0.81
ATL3-201ENST00000398868 CLCA2Q9UQC9 943 aa10.01□□□□□ -0.81
ATL3-201ENST00000398868 KDM5AP29375 1690 aaKnown RBP10.01□□□□□ -0.81
ATL3-201ENST00000398868 ESRRAP11474 423 aaPredicted RBP10.01□□□□□ -0.81
ATL3-201ENST00000398868 CEP95Q96GE4 821 aa10.01□□□□□ -0.81
ATL3-201ENST00000398868 GABBR1Q9UBS5 961 aa10.01□□□□□ -0.81
ATL3-201ENST00000398868 MINPP1Q9UNW1 487 aa10.01□□□□□ -0.81
ATL3-201ENST00000398868 SLC8A2Q9UPR5 921 aa10.01□□□□□ -0.81
ATL3-201ENST00000398868 HNRNPCL2B2RXH8 293 aa10.01□□□□□ -0.81
ATL3-201ENST00000398868 PRPSAP2O60256 369 aa10.01□□□□□ -0.81
ATL3-201ENST00000398868 HNRNPCL1O60812 293 aaKnown RBP10.01□□□□□ -0.81
ATL3-201ENST00000398868 GRIK1P39086 918 aa10.01□□□□□ -0.81
ATL3-201ENST00000398868 CASP8Q14790 479 aa10.01□□□□□ -0.81
ATL3-201ENST00000398868 TAF1CQ15572 869 aaPredicted RBP10.01□□□□□ -0.81
ATL3-201ENST00000398868 ANGEL2Q5VTE6 544 aaKnown RBP10.01□□□□□ -0.81
ATL3-201ENST00000398868 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.01□□□□□ -0.81
ATL3-201ENST00000398868 NR1D1P20393 614 aa10.01□□□□□ -0.81
ATL3-201ENST00000398868 LMNB1P20700 586 aa10.01□□□□□ -0.81
ATL3-201ENST00000398868 ATL3Q6DD88 541 aa10.01□□□□□ -0.81
ATL3-201ENST00000398868 C11orf57Q6ZUT1 292 aaPredicted RBP10.01□□□□□ -0.81
ATL3-201ENST00000398868 TADA2BQ86TJ2 420 aa10.01□□□□□ -0.81
ATL3-201ENST00000398868 A0A0G2JND7 137 aa10.01□□□□□ -0.81
ATL3-201ENST00000398868 DDAH1O94760 285 aa10.01□□□□□ -0.81
ATL3-201ENST00000398868 GNA14O95837 355 aa10.01□□□□□ -0.81
ATL3-201ENST00000398868 KIF11P52732 1056 aa10.01□□□□□ -0.81
ATL3-201ENST00000398868 NOP14P78316 857 aaKnown RBP10.01□□□□□ -0.81
ATL3-201ENST00000398868 MTM1Q13496 603 aa10.01□□□□□ -0.81
ATL3-201ENST00000398868 RABGGTAQ92696 567 aa10.01□□□□□ -0.81
ATL3-201ENST00000398868 NEDD4P46934 1319 aa10.01□□□□□ -0.81
ATL3-201ENST00000398868 WDR17Q8IZU2 1322 aa10.01□□□□□ -0.81
ATL3-201ENST00000398868 XPOTO43592 962 aaKnown RBP10□□□□□ -0.81
ATL3-201ENST00000398868 ACSL3O95573 720 aa10□□□□□ -0.81
ATL3-201ENST00000398868 ASMTLO95671 621 aa10□□□□□ -0.81
ATL3-201ENST00000398868 PNMA6AP0CW24 399 aaPredicted RBP10□□□□□ -0.81
ATL3-201ENST00000398868 PLS3P13797 630 aa10□□□□□ -0.81
ATL3-201ENST00000398868 ZFXP17010 805 aaPredicted RBP10□□□□□ -0.81
ATL3-201ENST00000398868 HLA-DPA1P20036 260 aa10□□□□□ -0.81
ATL3-201ENST00000398868 SGO2Q562F6 1265 aa10□□□□□ -0.81
ATL3-201ENST00000398868 C11orf74Q86VG3 221 aa10□□□□□ -0.81
ATL3-201ENST00000398868 SPZ1Q9BXG8 430 aa10□□□□□ -0.81
ATL3-201ENST00000398868 CDC23Q9UJX2 597 aa10□□□□□ -0.81
ATL3-201ENST00000398868 WDR64B1ANS9 1081 aa10□□□□□ -0.81
ATL3-201ENST00000398868 DYNC1LI2O43237 492 aaPredicted RBP10□□□□□ -0.81
ATL3-201ENST00000398868 ARL4AP40617 200 aa10□□□□□ -0.81
ATL3-201ENST00000398868 DEUP1Q05D60 604 aa10□□□□□ -0.81
ATL3-201ENST00000398868 TERF2Q15554 542 aa10□□□□□ -0.81
ATL3-201ENST00000398868 MDH1BQ5I0G3 518 aa10□□□□□ -0.81
ATL3-201ENST00000398868 APOA5Q6Q788 366 aa10□□□□□ -0.81
ATL3-201ENST00000398868 ARHGEF25Q86VW2 580 aa10□□□□□ -0.81
ATL3-201ENST00000398868 GJD4Q96KN9 370 aaPredicted RBP10□□□□□ -0.81
ATL3-201ENST00000398868 SPON1Q9HCB6 807 aa10□□□□□ -0.81
ATL3-201ENST00000398868 ANGPTL2Q9UKU9 493 aa10□□□□□ -0.81
ATL3-201ENST00000398868 CARMIL3Q8ND23 1372 aa10□□□□□ -0.81
ATL3-201ENST00000398868 ROBO2Q9HCK4 1378 aa10□□□□□ -0.81
ATL3-201ENST00000398868 LARGE1O95461 756 aa10□□□□□ -0.81
ATL3-201ENST00000398868 FCER1AP12319 257 aa10□□□□□ -0.81
ATL3-201ENST00000398868 GCLMP48507 274 aa10□□□□□ -0.81
ATL3-201ENST00000398868 AMHR2Q16671 573 aa10□□□□□ -0.81
ATL3-201ENST00000398868 MFSD14CQ5VZR4 134 aa10□□□□□ -0.81
ATL3-201ENST00000398868 FBXW10Q5XX13 1052 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms