RNA–Protein interactions for RNA: ENST00000398792.3

CDH23-204, Transcript of cadherin related 23, humanhuman

TSL 2

Gene CDH23, Length 1,649 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-204ENST00000398792 GLIS3Q8NEA6 775 aa18.46■□□□□ 0.55
CDH23-204ENST00000398792 MCPH1Q8NEM0 835 aa18.46■□□□□ 0.55
CDH23-204ENST00000398792 DRC1Q96MC2 740 aa18.46■□□□□ 0.55
CDH23-204ENST00000398792 FGFBP2Q9BYJ0 223 aa18.46■□□□□ 0.55
CDH23-204ENST00000398792 AP5M1Q9H0R1 490 aa18.46■□□□□ 0.55
CDH23-204ENST00000398792 XPNPEP1Q9NQW7 623 aa18.46■□□□□ 0.55
CDH23-204ENST00000398792 PDLIM7Q9NR12 457 aa18.46■□□□□ 0.55
CDH23-204ENST00000398792 TBC1D7Q9P0N9 293 aa18.46■□□□□ 0.55
CDH23-204ENST00000398792 SEL1LQ9UBV2 794 aa18.46■□□□□ 0.55
CDH23-204ENST00000398792 ZNF215Q9UL58 517 aaPredicted RBP18.46■□□□□ 0.55
CDH23-204ENST00000398792 SFI1A8K8P3 1242 aa18.45■□□□□ 0.54
CDH23-204ENST00000398792 RFC5P40937 340 aa18.45■□□□□ 0.54
CDH23-204ENST00000398792 CPT1AP50416 773 aa18.45■□□□□ 0.54
CDH23-204ENST00000398792 POLGP54098 1239 aaPredicted RBP18.45■□□□□ 0.54
CDH23-204ENST00000398792 PAK1Q13153 545 aa18.45■□□□□ 0.54
CDH23-204ENST00000398792 EMC2Q15006 297 aa18.45■□□□□ 0.54
CDH23-204ENST00000398792 MAEAQ7L5Y9 396 aa18.45■□□□□ 0.54
CDH23-204ENST00000398792 MED15Q96RN5 788 aa18.45■□□□□ 0.54
CDH23-204ENST00000398792 DHX33Q9H6R0 707 aaKnown RBP18.45■□□□□ 0.54
CDH23-204ENST00000398792 TRPC6Q9Y210 931 aa18.45■□□□□ 0.54
CDH23-204ENST00000398792 MYH11P35749 1972 aa18.45■□□□□ 0.54
CDH23-204ENST00000398792 ZBTB42B2RXF5 422 aa18.45■□□□□ 0.54
CDH23-204ENST00000398792 PSMA7O14818 248 aa18.45■□□□□ 0.54
CDH23-204ENST00000398792 HBP1O60381 514 aa18.45■□□□□ 0.54
CDH23-204ENST00000398792 CNGA1P29973 690 aa18.45■□□□□ 0.54
CDH23-204ENST00000398792 CCND3P30281 292 aaPredicted RBP18.45■□□□□ 0.54
CDH23-204ENST00000398792 NCAPHQ15003 741 aa18.45■□□□□ 0.54
CDH23-204ENST00000398792 UVSSAQ2YD98 709 aa18.45■□□□□ 0.54
CDH23-204ENST00000398792 L1TD1Q5T7N2 865 aaKnown RBP18.45■□□□□ 0.54
CDH23-204ENST00000398792 FAM102BQ5T8I3 360 aa18.45■□□□□ 0.54
CDH23-204ENST00000398792 GUF1Q8N442 669 aaKnown RBP18.45■□□□□ 0.54
CDH23-204ENST00000398792 MYCT1Q8N699 235 aa18.45■□□□□ 0.54
CDH23-204ENST00000398792 DNAJC5GQ8N7S2 189 aa18.45■□□□□ 0.54
CDH23-204ENST00000398792 SLAIN1Q8ND83 568 aa18.45■□□□□ 0.54
CDH23-204ENST00000398792 NELFBQ8WX92 580 aa18.45■□□□□ 0.54
CDH23-204ENST00000398792 FIZ1Q96SL8 496 aa18.45■□□□□ 0.54
CDH23-204ENST00000398792 GPRC5CQ9NQ84 441 aa18.45■□□□□ 0.54
CDH23-204ENST00000398792 RWDD2AQ9UIY3 292 aa18.45■□□□□ 0.54
CDH23-204ENST00000398792 TRIM17Q9Y577 477 aa18.45■□□□□ 0.54
CDH23-204ENST00000398792 SMTNL1A8MU46 457 aa18.44■□□□□ 0.54
CDH23-204ENST00000398792 GOLGA6L19H0YKK7 550 aa18.44■□□□□ 0.54
CDH23-204ENST00000398792 H3BRB1 525 aa18.44■□□□□ 0.54
CDH23-204ENST00000398792 F2P00734 622 aa18.44■□□□□ 0.54
CDH23-204ENST00000398792 CASP5P51878 434 aa18.44■□□□□ 0.54
CDH23-204ENST00000398792 IRX5P78411 483 aaPredicted RBP18.44■□□□□ 0.54
CDH23-204ENST00000398792 LRRC41Q15345 812 aa18.44■□□□□ 0.54
CDH23-204ENST00000398792 BRDTQ58F21 947 aaPredicted RBP18.44■□□□□ 0.54
CDH23-204ENST00000398792 ODR4Q5SWX8 454 aa18.44■□□□□ 0.54
CDH23-204ENST00000398792 ENOX1Q8TC92 643 aaKnown RBP18.44■□□□□ 0.54
CDH23-204ENST00000398792 SLC7A3Q8WY07 619 aa18.44■□□□□ 0.54
CDH23-204ENST00000398792 KIFAP3Q92845 792 aa18.44■□□□□ 0.54
CDH23-204ENST00000398792 DHTKD1Q96HY7 919 aaPredicted RBP18.44■□□□□ 0.54
CDH23-204ENST00000398792 UPF3AQ9H1J1 476 aaKnown RBP18.44■□□□□ 0.54
CDH23-204ENST00000398792 RNPEPQ9H4A4 650 aa18.44■□□□□ 0.54
CDH23-204ENST00000398792 TUT1Q9H6E5 874 aaKnown RBP18.44■□□□□ 0.54
CDH23-204ENST00000398792 LARSQ9P2J5 1176 aaKnown RBP18.44■□□□□ 0.54
CDH23-204ENST00000398792 RARBP10826 455 aa18.43■□□□□ 0.54
CDH23-204ENST00000398792 PLS3P13797 630 aa18.43■□□□□ 0.54
CDH23-204ENST00000398792 STX17P56962 302 aa18.43■□□□□ 0.54
CDH23-204ENST00000398792 GJA9P57773 515 aa18.43■□□□□ 0.54
CDH23-204ENST00000398792 FSCN1Q16658 493 aaKnown RBP18.43■□□□□ 0.54
CDH23-204ENST00000398792 EPM2AIP1Q7L775 607 aaPredicted RBP18.43■□□□□ 0.54
CDH23-204ENST00000398792 FAM178BQ8IXR5 827 aa18.43■□□□□ 0.54
CDH23-204ENST00000398792 MYOCDQ8IZQ8 938 aa18.43■□□□□ 0.54
CDH23-204ENST00000398792 MRPL44Q9H9J2 332 aaKnown RBP18.43■□□□□ 0.54
CDH23-204ENST00000398792 PTCH2Q9Y6C5 1203 aa18.43■□□□□ 0.54
CDH23-204ENST00000398792 MAFO75444 373 aaPredicted RBP18.42■□□□□ 0.54
CDH23-204ENST00000398792 INHAP05111 366 aa18.42■□□□□ 0.54
CDH23-204ENST00000398792 MYBP10242 640 aa18.42■□□□□ 0.54
CDH23-204ENST00000398792 SOX10P56693 466 aa18.42■□□□□ 0.54
CDH23-204ENST00000398792 NKX3-2P78367 333 aa18.42■□□□□ 0.54
CDH23-204ENST00000398792 BEX3Q00994 111 aa18.42■□□□□ 0.54
CDH23-204ENST00000398792 TBC1D8BQ0IIM8 1120 aa18.42■□□□□ 0.54
CDH23-204ENST00000398792 SCFD1Q8WVM8 642 aa18.42■□□□□ 0.54
CDH23-204ENST00000398792 COL1A2P08123 1366 aa18.42■□□□□ 0.54
CDH23-204ENST00000398792 MYADML2A6NDP7 307 aa18.41■□□□□ 0.54
CDH23-204ENST00000398792 GCNT3O95395 438 aa18.41■□□□□ 0.54
CDH23-204ENST00000398792 C6orf222P0C671 652 aaPredicted RBP18.41■□□□□ 0.54
CDH23-204ENST00000398792 CCNE1P24864 410 aa18.41■□□□□ 0.54
CDH23-204ENST00000398792 PMS1P54277 932 aaKnown RBP18.41■□□□□ 0.54
CDH23-204ENST00000398792 RTP1P59025 263 aa18.41■□□□□ 0.54
CDH23-204ENST00000398792 BMT2Q1RMZ1 405 aa18.41■□□□□ 0.54
CDH23-204ENST00000398792 ZNF484Q5JVG2 852 aa18.41■□□□□ 0.54
CDH23-204ENST00000398792 P2RX5Q93086 422 aa18.41■□□□□ 0.54
CDH23-204ENST00000398792 POLR3FQ9H1D9 316 aaPredicted RBP18.41■□□□□ 0.54
CDH23-204ENST00000398792 HSD3B7Q9H2F3 369 aa18.41■□□□□ 0.54
CDH23-204ENST00000398792 NFE2L3Q9Y4A8 694 aa18.41■□□□□ 0.54
CDH23-204ENST00000398792 HTTP42858 3142 aa18.41■□□□□ 0.54
CDH23-204ENST00000398792 TRIM49BA6NDI0 452 aa18.41■□□□□ 0.54
CDH23-204ENST00000398792 EIF3DO15371 548 aaKnown RBP eCLIP18.41■□□□□ 0.54
CDH23-204ENST00000398792 GAS2O43903 313 aaKnown RBP18.41■□□□□ 0.54
CDH23-204ENST00000398792 UBE4BO95155 1302 aa18.41■□□□□ 0.54
CDH23-204ENST00000398792 KIF20AO95235 890 aa18.41■□□□□ 0.54
CDH23-204ENST00000398792 MAPTP10636 758 aaKnown RBP18.41■□□□□ 0.54
CDH23-204ENST00000398792 INSRRP14616 1297 aa18.41■□□□□ 0.54
CDH23-204ENST00000398792 NMT1P30419 496 aaKnown RBP18.41■□□□□ 0.54
CDH23-204ENST00000398792 GRK4P32298 578 aa18.41■□□□□ 0.54
CDH23-204ENST00000398792 DMP1Q13316 513 aaPredicted RBP18.41■□□□□ 0.54
CDH23-204ENST00000398792 SPATA1Q5VX52 437 aa18.41■□□□□ 0.54
CDH23-204ENST00000398792 EXOC8Q8IYI6 725 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms