RNA–Protein interactions for RNA: ENST00000398510.7

CHD9-202, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best) BASIC

Gene CHD9, Length 11,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-202ENST00000398510 FAM186BQ8IYM0 893 aa2.92□□□□□ -1.94
CHD9-202ENST00000398510 KCNB2Q92953 911 aa2.92□□□□□ -1.94
CHD9-202ENST00000398510 RMDN1Q96DB5 314 aa2.92□□□□□ -1.94
CHD9-202ENST00000398510 SPACA7Q96KW9 195 aa2.92□□□□□ -1.94
CHD9-202ENST00000398510 UPF3AQ9H1J1 476 aaKnown RBP2.92□□□□□ -1.94
CHD9-202ENST00000398510 LRWD1Q9UFC0 647 aa2.92□□□□□ -1.94
CHD9-202ENST00000398510 BCORQ6W2J9 1755 aa2.92□□□□□ -1.94
CHD9-202ENST00000398510 TAF4O00268 1085 aa2.92□□□□□ -1.94
CHD9-202ENST00000398510 FBXW4P57775 412 aa2.92□□□□□ -1.94
CHD9-202ENST00000398510 GTF2H3Q13889 308 aa2.92□□□□□ -1.94
CHD9-202ENST00000398510 DCAF17Q5H9S7 520 aaPredicted RBP2.92□□□□□ -1.94
CHD9-202ENST00000398510 HDXQ7Z353 690 aa2.92□□□□□ -1.94
CHD9-202ENST00000398510 DSG4Q86SJ6 1040 aa2.92□□□□□ -1.94
CHD9-202ENST00000398510 SNX21Q969T3 373 aa2.92□□□□□ -1.94
CHD9-202ENST00000398510 PCDHA12Q9UN75 941 aa2.92□□□□□ -1.94
CHD9-202ENST00000398510 NEMP1O14524 444 aa2.92□□□□□ -1.94
CHD9-202ENST00000398510 IL18RAPO95256 599 aa2.92□□□□□ -1.94
CHD9-202ENST00000398510 HOXC9P31274 260 aa2.92□□□□□ -1.94
CHD9-202ENST00000398510 SERPINB10P48595 397 aa2.92□□□□□ -1.94
CHD9-202ENST00000398510 SLC26A2P50443 739 aa2.92□□□□□ -1.94
CHD9-202ENST00000398510 ZNF445P59923 1031 aa2.92□□□□□ -1.94
CHD9-202ENST00000398510 TAF1BQ53T94 588 aaPredicted RBP2.92□□□□□ -1.94
CHD9-202ENST00000398510 CIAPIN1Q6FI81 312 aa2.92□□□□□ -1.94
CHD9-202ENST00000398510 UGT3A1Q6NUS8 523 aa2.92□□□□□ -1.94
CHD9-202ENST00000398510 KLHL35Q6PF15 583 aa2.92□□□□□ -1.94
CHD9-202ENST00000398510 ARHGAP27Q6ZUM4 889 aa2.92□□□□□ -1.94
CHD9-202ENST00000398510 PRUNE1Q86TP1 453 aa2.92□□□□□ -1.94
CHD9-202ENST00000398510 CD302Q8IX05 232 aa2.92□□□□□ -1.94
CHD9-202ENST00000398510 NSUN6Q8TEA1 469 aaKnown RBP2.92□□□□□ -1.94
CHD9-202ENST00000398510 XAGE3Q8WTP9 111 aa2.92□□□□□ -1.94
CHD9-202ENST00000398510 TSPAN17Q96FV3 270 aa2.92□□□□□ -1.94
CHD9-202ENST00000398510 PHF20Q9BVI0 1012 aa2.92□□□□□ -1.94
CHD9-202ENST00000398510 SLC7A5P2Q9GIP4 190 aa2.92□□□□□ -1.94
CHD9-202ENST00000398510 FOXP1Q9H334 677 aaPredicted RBP2.92□□□□□ -1.94
CHD9-202ENST00000398510 PARVGQ9HBI0 331 aa2.92□□□□□ -1.94
CHD9-202ENST00000398510 STK38LQ9Y2H1 464 aa2.92□□□□□ -1.94
CHD9-202ENST00000398510 MFHAS1Q9Y4C4 1052 aa2.92□□□□□ -1.94
CHD9-202ENST00000398510 FPGT-TNNI3KV9GXZ4 949 aa2.92□□□□□ -1.94
CHD9-202ENST00000398510 MYO5AQ9Y4I1 1855 aaKnown RBP2.92□□□□□ -1.94
CHD9-202ENST00000398510 LOC102724159A0A0B4J2E5 919 aa2.92□□□□□ -1.94
CHD9-202ENST00000398510 AKR1B15C9JRZ8 316 aaPredicted RBP2.92□□□□□ -1.94
CHD9-202ENST00000398510 K7ENM7 598 aa2.92□□□□□ -1.94
CHD9-202ENST00000398510 KRT37O76014 449 aa2.92□□□□□ -1.94
CHD9-202ENST00000398510 KRT38O76015 456 aa2.92□□□□□ -1.94
CHD9-202ENST00000398510 KRT14P02533 472 aa2.92□□□□□ -1.94
CHD9-202ENST00000398510 RALAP11233 206 aa2.92□□□□□ -1.94
CHD9-202ENST00000398510 ZNF18P17022 549 aa2.92□□□□□ -1.94
CHD9-202ENST00000398510 PWP2Q15269 919 aaKnown RBP2.92□□□□□ -1.94
CHD9-202ENST00000398510 BTBD8Q5XKL5 378 aa2.92□□□□□ -1.94
CHD9-202ENST00000398510 JADE1Q6IE81 842 aa2.92□□□□□ -1.94
CHD9-202ENST00000398510 ELOA2Q8IYF1 753 aaPredicted RBP2.92□□□□□ -1.94
CHD9-202ENST00000398510 RDM1Q8NG50 284 aa2.92□□□□□ -1.94
CHD9-202ENST00000398510 CEP70Q8NHQ1 597 aa2.92□□□□□ -1.94
CHD9-202ENST00000398510 ASAP3Q8TDY4 903 aa2.92□□□□□ -1.94
CHD9-202ENST00000398510 DENND1AQ8TEH3 1009 aa2.92□□□□□ -1.94
CHD9-202ENST00000398510 SOCS4Q8WXH5 440 aa2.92□□□□□ -1.94
CHD9-202ENST00000398510 C19orf60Q96EN9 201 aa2.92□□□□□ -1.94
CHD9-202ENST00000398510 POP1Q99575 1024 aaKnown RBP2.92□□□□□ -1.94
CHD9-202ENST00000398510 DCLK3Q9C098 648 aa2.92□□□□□ -1.94
CHD9-202ENST00000398510 ZCCHC2Q9C0B9 1178 aaKnown RBP2.92□□□□□ -1.94
CHD9-202ENST00000398510 GRPEL1Q9HAV7 217 aa2.92□□□□□ -1.94
CHD9-202ENST00000398510 TNS2Q63HR2 1409 aa2.92□□□□□ -1.94
CHD9-202ENST00000398510 KDM3BQ7LBC6 1761 aa2.92□□□□□ -1.94
CHD9-202ENST00000398510 FAM83GA6ND36 823 aa2.92□□□□□ -1.94
CHD9-202ENST00000398510 EBAG9O00559 213 aa2.92□□□□□ -1.94
CHD9-202ENST00000398510 PODXLO00592 558 aa2.92□□□□□ -1.94
CHD9-202ENST00000398510 BCAR3O75815 825 aa2.92□□□□□ -1.94
CHD9-202ENST00000398510 GRK3P35626 688 aa2.92□□□□□ -1.94
CHD9-202ENST00000398510 GLE1Q53GS7 698 aaKnown RBP2.92□□□□□ -1.94
CHD9-202ENST00000398510 ANKRD20A3Q5VUR7 823 aa2.92□□□□□ -1.94
CHD9-202ENST00000398510 ARHGEF18Q6ZSZ5 1173 aa2.92□□□□□ -1.94
CHD9-202ENST00000398510 LMNTD2Q8IXW0 634 aa2.92□□□□□ -1.94
CHD9-202ENST00000398510 HSPH1Q92598 858 aa2.92□□□□□ -1.94
CHD9-202ENST00000398510 ARHGEF1Q92888 912 aaKnown RBP2.92□□□□□ -1.94
CHD9-202ENST00000398510 FAM212AQ96EL1 285 aa2.92□□□□□ -1.94
CHD9-202ENST00000398510 RBM41Q96IZ5 413 aaKnown RBP2.92□□□□□ -1.94
CHD9-202ENST00000398510 KCTD5Q9NXV2 234 aa2.92□□□□□ -1.94
CHD9-202ENST00000398510 VPS51Q9UID3 782 aa2.92□□□□□ -1.94
CHD9-202ENST00000398510 CNOT7Q9UIV1 285 aaKnown RBP2.92□□□□□ -1.94
CHD9-202ENST00000398510 EXOC6BQ9Y2D4 811 aa2.92□□□□□ -1.94
CHD9-202ENST00000398510 ZNF263O14978 683 aa2.91□□□□□ -1.94
CHD9-202ENST00000398510 C4BPBP20851 252 aa2.91□□□□□ -1.94
CHD9-202ENST00000398510 PSMC2P35998 433 aaKnown RBP2.91□□□□□ -1.94
CHD9-202ENST00000398510 ARL4DP49703 201 aa2.91□□□□□ -1.94
CHD9-202ENST00000398510 STX1BP61266 288 aa2.91□□□□□ -1.94
CHD9-202ENST00000398510 GTF2IP78347 998 aa2.91□□□□□ -1.94
CHD9-202ENST00000398510 PPARAQ07869 468 aa2.91□□□□□ -1.94
CHD9-202ENST00000398510 GRM3Q14832 879 aa2.91□□□□□ -1.94
CHD9-202ENST00000398510 PDIA6Q15084 440 aa2.91□□□□□ -1.94
CHD9-202ENST00000398510 CEP85LQ5SZL2 805 aa2.91□□□□□ -1.94
CHD9-202ENST00000398510 USP17L2Q6R6M4 530 aa2.91□□□□□ -1.94
CHD9-202ENST00000398510 SEPT14Q6ZU15 432 aa2.91□□□□□ -1.94
CHD9-202ENST00000398510 FOXP4Q8IVH2 680 aaPredicted RBP2.91□□□□□ -1.94
CHD9-202ENST00000398510 CCDC105Q8IYK2 499 aa2.91□□□□□ -1.94
CHD9-202ENST00000398510 APPL2Q8NEU8 664 aa2.91□□□□□ -1.94
CHD9-202ENST00000398510 LARP4BQ92615 738 aaKnown RBP2.91□□□□□ -1.94
CHD9-202ENST00000398510 PACSIN1Q9BY11 444 aa2.91□□□□□ -1.94
CHD9-202ENST00000398510 BOLA2Q9H3K6 86 aa2.91□□□□□ -1.94
CHD9-202ENST00000398510 PCDHB12Q9Y5F1 795 aa2.91□□□□□ -1.94
CHD9-202ENST00000398510 LRRC37A3O60309 1634 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms