RNA–Protein interactions for RNA: ENST00000398193.8

RGPD1-201, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RGPD1, Length 5,425 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-201ENST00000398193 LRRC41Q15345 812 aa8.11□□□□□ -1.11
RGPD1-201ENST00000398193 SPA17Q15506 151 aa8.11□□□□□ -1.11
RGPD1-201ENST00000398193 GBP6Q6ZN66 633 aa8.11□□□□□ -1.11
RGPD1-201ENST00000398193 BAP1Q92560 729 aa8.11□□□□□ -1.11
RGPD1-201ENST00000398193 NTPCRQ9BSD7 190 aaKnown RBP8.11□□□□□ -1.11
RGPD1-201ENST00000398193 KRT86O43790 486 aa8.1□□□□□ -1.11
RGPD1-201ENST00000398193 RARRES1P49788 294 aa8.1□□□□□ -1.11
RGPD1-201ENST00000398193 MAPK7Q13164 816 aa8.1□□□□□ -1.11
RGPD1-201ENST00000398193 NEDD9Q14511 834 aa8.1□□□□□ -1.11
RGPD1-201ENST00000398193 SFMBT2Q5VUG0 894 aa8.1□□□□□ -1.11
RGPD1-201ENST00000398193 FAM160B1Q5W0V3 765 aa8.1□□□□□ -1.11
RGPD1-201ENST00000398193 WDR59Q6PJI9 974 aa8.1□□□□□ -1.11
RGPD1-201ENST00000398193 USP37Q86T82 979 aa8.1□□□□□ -1.11
RGPD1-201ENST00000398193 CPXCR1Q8N123 301 aa8.1□□□□□ -1.11
RGPD1-201ENST00000398193 SYT17Q9BSW7 474 aa8.1□□□□□ -1.11
RGPD1-201ENST00000398193 NIFKQ9BYG3 293 aaKnown RBP8.1□□□□□ -1.11
RGPD1-201ENST00000398193 GBP3Q9H0R5 595 aa8.1□□□□□ -1.11
RGPD1-201ENST00000398193 GANQ9H2C0 597 aa8.1□□□□□ -1.11
RGPD1-201ENST00000398193 JPH1Q9HDC5 661 aaPredicted RBP8.1□□□□□ -1.11
RGPD1-201ENST00000398193 TSKSQ9UJT2 592 aa8.1□□□□□ -1.11
RGPD1-201ENST00000398193 MRFAP1Q9Y605 127 aa8.1□□□□□ -1.11
RGPD1-201ENST00000398193 CHMP2AO43633 222 aa8.1□□□□□ -1.11
RGPD1-201ENST00000398193 CNMDO75829 334 aa8.1□□□□□ -1.11
RGPD1-201ENST00000398193 SUPT20HL2P0C7V6 817 aa8.1□□□□□ -1.11
RGPD1-201ENST00000398193 TAL1P17542 331 aaPredicted RBP8.1□□□□□ -1.11
RGPD1-201ENST00000398193 ABHD15Q6UXT9 468 aa8.1□□□□□ -1.11
RGPD1-201ENST00000398193 SYT10Q6XYQ8 523 aa8.1□□□□□ -1.11
RGPD1-201ENST00000398193 INTS8Q75QN2 995 aaKnown RBP8.1□□□□□ -1.11
RGPD1-201ENST00000398193 RPGRIP1Q96KN7 1286 aa8.1□□□□□ -1.11
RGPD1-201ENST00000398193 CCDC43Q96MW1 224 aaKnown RBP8.1□□□□□ -1.11
RGPD1-201ENST00000398193 PDLIM7Q9NR12 457 aa8.1□□□□□ -1.11
RGPD1-201ENST00000398193 INTUQ9ULD6 942 aa8.1□□□□□ -1.11
RGPD1-201ENST00000398193 MAFBQ9Y5Q3 323 aaPredicted RBP8.1□□□□□ -1.11
RGPD1-201ENST00000398193 EFCAB8A8MWE9 144 aa8.1□□□□□ -1.11
RGPD1-201ENST00000398193 DGAT1O75907 488 aa8.1□□□□□ -1.11
RGPD1-201ENST00000398193 ALDH5A1P51649 535 aaPredicted RBP8.1□□□□□ -1.11
RGPD1-201ENST00000398193 KCNMA1Q12791 1236 aa8.1□□□□□ -1.11
RGPD1-201ENST00000398193 LDLRAD1Q5T700 205 aa8.1□□□□□ -1.11
RGPD1-201ENST00000398193 BANK1Q8NDB2 785 aa8.1□□□□□ -1.11
RGPD1-201ENST00000398193 HPS3Q969F9 1004 aa8.1□□□□□ -1.11
RGPD1-201ENST00000398193 KIAA1586Q9HCI6 787 aa8.1□□□□□ -1.11
RGPD1-201ENST00000398193 A1CFQ9NQ94 594 aaKnown RBP8.1□□□□□ -1.11
RGPD1-201ENST00000398193 CTAGE9A4FU28 777 aa8.1□□□□□ -1.11
RGPD1-201ENST00000398193 GLTPD2A6NH11 291 aa8.1□□□□□ -1.11
RGPD1-201ENST00000398193 EIF2AK2P19525 551 aaKnown RBP8.1□□□□□ -1.11
RGPD1-201ENST00000398193 PRKCIP41743 596 aa8.1□□□□□ -1.11
RGPD1-201ENST00000398193 CYP4A11Q02928 519 aa8.1□□□□□ -1.11
RGPD1-201ENST00000398193 SLC9C1Q4G0N8 1177 aa8.1□□□□□ -1.11
RGPD1-201ENST00000398193 ARHGAP29Q52LW3 1261 aa8.1□□□□□ -1.11
RGPD1-201ENST00000398193 XKR3Q5GH77 459 aa8.1□□□□□ -1.11
RGPD1-201ENST00000398193 RNF10Q8N5U6 811 aaKnown RBP8.1□□□□□ -1.11
RGPD1-201ENST00000398193 LSM14BQ9BX40 385 aaKnown RBP8.1□□□□□ -1.11
RGPD1-201ENST00000398193 TGFB1I1O43294 461 aa8.09□□□□□ -1.11
RGPD1-201ENST00000398193 MYCLP12524 364 aaPredicted RBP8.09□□□□□ -1.11
RGPD1-201ENST00000398193 ARHGAP25P42331 645 aa8.09□□□□□ -1.11
RGPD1-201ENST00000398193 SNAPC2Q13487 334 aa8.09□□□□□ -1.11
RGPD1-201ENST00000398193 ZNF467Q7Z7K2 595 aaPredicted RBP8.09□□□□□ -1.11
RGPD1-201ENST00000398193 ABRAQ8N0Z2 381 aa8.09□□□□□ -1.11
RGPD1-201ENST00000398193 NAPGQ99747 312 aaPredicted RBP8.09□□□□□ -1.11
RGPD1-201ENST00000398193 ATP6V0A4Q9HBG4 840 aa8.09□□□□□ -1.11
RGPD1-201ENST00000398193 WRAP73Q9P2S5 460 aaPredicted RBP8.09□□□□□ -1.11
RGPD1-201ENST00000398193 STBD1O95210 358 aa8.09□□□□□ -1.11
RGPD1-201ENST00000398193 PRLRP16471 622 aa8.09□□□□□ -1.11
RGPD1-201ENST00000398193 JAM2P57087 298 aa8.09□□□□□ -1.11
RGPD1-201ENST00000398193 ODR4Q5SWX8 454 aa8.09□□□□□ -1.11
RGPD1-201ENST00000398193 NSMFQ6X4W1 530 aa8.09□□□□□ -1.11
RGPD1-201ENST00000398193 FAM186BQ8IYM0 893 aa8.09□□□□□ -1.11
RGPD1-201ENST00000398193 SPATC1LQ9H0A9 340 aa8.09□□□□□ -1.11
RGPD1-201ENST00000398193 AGPAT3Q9NRZ7 376 aa8.09□□□□□ -1.11
RGPD1-201ENST00000398193 ZSWIM8A7E2V4 1837 aa8.09□□□□□ -1.11
RGPD1-201ENST00000398193 HOXC6P09630 235 aa8.09□□□□□ -1.11
RGPD1-201ENST00000398193 IRX3P78415 501 aaPredicted RBP8.09□□□□□ -1.11
RGPD1-201ENST00000398193 KCNH2Q12809 1159 aa8.09□□□□□ -1.11
RGPD1-201ENST00000398193 DMP1Q13316 513 aaPredicted RBP8.09□□□□□ -1.11
RGPD1-201ENST00000398193 ASTE1Q2TB18 679 aaPredicted RBP8.09□□□□□ -1.11
RGPD1-201ENST00000398193 CACNA2D4Q7Z3S7 1137 aa8.09□□□□□ -1.11
RGPD1-201ENST00000398193 MAP4K3Q8IVH8 894 aa8.09□□□□□ -1.11
RGPD1-201ENST00000398193 CPLX3Q8WVH0 158 aa8.09□□□□□ -1.11
RGPD1-201ENST00000398193 PES1O00541 588 aaKnown RBP8.09□□□□□ -1.11
RGPD1-201ENST00000398193 COBLO75128 1261 aa8.09□□□□□ -1.11
RGPD1-201ENST00000398193 DDNO94850 711 aaPredicted RBP8.09□□□□□ -1.11
RGPD1-201ENST00000398193 PRPF6O94906 941 aaKnown RBP8.09□□□□□ -1.11
RGPD1-201ENST00000398193 PIGRP01833 764 aa8.09□□□□□ -1.11
RGPD1-201ENST00000398193 FERP16591 822 aa8.09□□□□□ -1.11
RGPD1-201ENST00000398193 GOLGA8FQ08AF8 430 aa8.09□□□□□ -1.11
RGPD1-201ENST00000398193 GOLGA8DPQ0D2H9 430 aa8.09□□□□□ -1.11
RGPD1-201ENST00000398193 MOGSQ13724 837 aa8.09□□□□□ -1.11
RGPD1-201ENST00000398193 ASIC2Q16515 512 aa8.09□□□□□ -1.11
RGPD1-201ENST00000398193 ANKRD23Q86SG2 305 aa8.09□□□□□ -1.11
RGPD1-201ENST00000398193 NELFCDQ8IXH7 590 aa8.09□□□□□ -1.11
RGPD1-201ENST00000398193 TMC2Q8TDI7 906 aa8.09□□□□□ -1.11
RGPD1-201ENST00000398193 PIGOQ8TEQ8 1089 aa8.09□□□□□ -1.11
RGPD1-201ENST00000398193 ZCCHC17Q9NP64 241 aaKnown RBP8.09□□□□□ -1.11
RGPD1-201ENST00000398193 K7ENM7 598 aa8.08□□□□□ -1.12
RGPD1-201ENST00000398193 LGR5O75473 907 aa8.08□□□□□ -1.12
RGPD1-201ENST00000398193 CCNE2O96020 404 aa8.08□□□□□ -1.12
RGPD1-201ENST00000398193 KRT13P13646 458 aa8.08□□□□□ -1.12
RGPD1-201ENST00000398193 SLC26A2P50443 739 aa8.08□□□□□ -1.12
RGPD1-201ENST00000398193 GNG11P61952 73 aa8.08□□□□□ -1.12
RGPD1-201ENST00000398193 HERVK_113P62684 666 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms