RNA–Protein interactions for RNA: ENST00000398020.6

TMEM55B-202, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-202ENST00000398020 LINC01465Q8N7H1 131 aa28.29■■■□□ 2.12
TMEM55B-202ENST00000398020 KCNG4Q8TDN1 519 aa28.29■■■□□ 2.12
TMEM55B-202ENST00000398020 SLC7A3Q8WY07 619 aa28.29■■■□□ 2.12
TMEM55B-202ENST00000398020 SYMPKQ92797 1274 aaKnown RBP28.29■■■□□ 2.12
TMEM55B-202ENST00000398020 CDK5RAP3Q96JB5 506 aa28.29■■■□□ 2.12
TMEM55B-202ENST00000398020 TCHHQ07283 1943 aa28.29■■■□□ 2.12
TMEM55B-202ENST00000398020 KDM3AQ9Y4C1 1321 aa28.29■■■□□ 2.12
TMEM55B-202ENST00000398020 VTNP04004 478 aa28.29■■■□□ 2.12
TMEM55B-202ENST00000398020 XRCC6P12956 609 aaKnown RBP eCLIP28.29■■■□□ 2.12
TMEM55B-202ENST00000398020 ME1P48163 572 aa28.29■■■□□ 2.12
TMEM55B-202ENST00000398020 EPHB4P54760 987 aa28.29■■■□□ 2.12
TMEM55B-202ENST00000398020 MKRN4PQ13434 485 aaPredicted RBP28.29■■■□□ 2.12
TMEM55B-202ENST00000398020 MBTPS1Q14703 1052 aa28.29■■■□□ 2.12
TMEM55B-202ENST00000398020 KARSQ15046 597 aaKnown RBP28.29■■■□□ 2.12
TMEM55B-202ENST00000398020 RPAINQ86UA6 219 aa28.29■■■□□ 2.12
TMEM55B-202ENST00000398020 RASSF8Q8NHQ8 419 aa28.29■■■□□ 2.12
TMEM55B-202ENST00000398020 IPO9Q96P70 1041 aaKnown RBP28.29■■■□□ 2.12
TMEM55B-202ENST00000398020 DHX33Q9H6R0 707 aaKnown RBP28.29■■■□□ 2.12
TMEM55B-202ENST00000398020 DBR1Q9UK59 544 aaKnown RBP28.29■■■□□ 2.12
TMEM55B-202ENST00000398020 RCOR1Q9UKL0 485 aa28.29■■■□□ 2.12
TMEM55B-202ENST00000398020 CIZ1Q9ULV3 898 aaPredicted RBP28.29■■■□□ 2.12
TMEM55B-202ENST00000398020 AKT3Q9Y243 479 aa28.29■■■□□ 2.12
TMEM55B-202ENST00000398020 IGKV6-21A0A0C4DH24 114 aa28.28■■■□□ 2.12
TMEM55B-202ENST00000398020 CHRNA1P02708 482 aa28.28■■■□□ 2.12
TMEM55B-202ENST00000398020 ACRP10323 421 aa28.28■■■□□ 2.12
TMEM55B-202ENST00000398020 TMOD1P28289 359 aa28.28■■■□□ 2.12
TMEM55B-202ENST00000398020 MRPS6P82932 125 aaKnown RBP28.28■■■□□ 2.12
TMEM55B-202ENST00000398020 SPATA32Q96LK8 384 aa28.28■■■□□ 2.12
TMEM55B-202ENST00000398020 GDF15Q99988 308 aa28.28■■■□□ 2.12
TMEM55B-202ENST00000398020 OSBPL7Q9BZF2 842 aa28.28■■■□□ 2.12
TMEM55B-202ENST00000398020 BHMT2Q9H2M3 363 aa28.28■■■□□ 2.12
TMEM55B-202ENST00000398020 GINS2Q9Y248 185 aa28.28■■■□□ 2.12
TMEM55B-202ENST00000398020 CDY2AQ9Y6F7 541 aa28.28■■■□□ 2.12
TMEM55B-202ENST00000398020 USO1O60763 962 aaKnown RBP28.27■■■□□ 2.12
TMEM55B-202ENST00000398020 CAND2O75155 1236 aa28.27■■■□□ 2.12
TMEM55B-202ENST00000398020 RFC5P40937 340 aa28.27■■■□□ 2.12
TMEM55B-202ENST00000398020 GPNMBQ14956 572 aa28.27■■■□□ 2.12
TMEM55B-202ENST00000398020 EMC2Q15006 297 aa28.27■■■□□ 2.12
TMEM55B-202ENST00000398020 HYIQ5T013 277 aa28.27■■■□□ 2.12
TMEM55B-202ENST00000398020 CHRDL2Q6WN34 429 aa28.27■■■□□ 2.12
TMEM55B-202ENST00000398020 LEO1Q8WVC0 666 aaPredicted RBP28.27■■■□□ 2.12
TMEM55B-202ENST00000398020 CALML4Q96GE6 196 aa28.27■■■□□ 2.12
TMEM55B-202ENST00000398020 ZNF668Q96K58 619 aaPredicted RBP28.27■■■□□ 2.12
TMEM55B-202ENST00000398020 PCDHA7Q9UN72 937 aa28.27■■■□□ 2.12
TMEM55B-202ENST00000398020 DNM3Q9UQ16 869 aa28.27■■■□□ 2.12
TMEM55B-202ENST00000398020 ARHGEF35A5YM69 484 aa28.26■■■□□ 2.12
TMEM55B-202ENST00000398020 MGAT3Q09327 533 aa28.26■■■□□ 2.12
TMEM55B-202ENST00000398020 TMEM143Q96AN5 459 aa28.26■■■□□ 2.12
TMEM55B-202ENST00000398020 MAP7D2Q96T17 732 aa28.26■■■□□ 2.12
TMEM55B-202ENST00000398020 NT5C3AQ9H0P0 336 aa28.26■■■□□ 2.12
TMEM55B-202ENST00000398020 GDPD2Q9HCC8 539 aa28.26■■■□□ 2.12
TMEM55B-202ENST00000398020 PPME1Q9Y570 386 aa28.26■■■□□ 2.12
TMEM55B-202ENST00000398020 SIP14410 1827 aa28.26■■■□□ 2.11
TMEM55B-202ENST00000398020 NBNO60934 754 aa28.26■■■□□ 2.11
TMEM55B-202ENST00000398020 PPIGQ13427 754 aaKnown RBP eCLIP28.26■■■□□ 2.114e-9■■□□□ 14.4
TMEM55B-202ENST00000398020 TMEM119Q4V9L6 283 aa28.26■■■□□ 2.11
TMEM55B-202ENST00000398020 PRPF38BQ5VTL8 546 aaKnown RBP28.26■■■□□ 2.11
TMEM55B-202ENST00000398020 IER5Q5VY09 327 aa28.26■■■□□ 2.11
TMEM55B-202ENST00000398020 NME8Q8N427 588 aa28.26■■■□□ 2.11
TMEM55B-202ENST00000398020 VWCEQ96DN2 955 aa28.26■■■□□ 2.11
TMEM55B-202ENST00000398020 UBE2OQ9C0C9 1292 aaKnown RBP28.26■■■□□ 2.11
TMEM55B-202ENST00000398020 XPNPEP1Q9NQW7 623 aa28.26■■■□□ 2.11
TMEM55B-202ENST00000398020 LAMA2P24043 3122 aaKnown RBP28.25■■■□□ 2.11
TMEM55B-202ENST00000398020 CUTAO60888 179 aa28.25■■■□□ 2.11
TMEM55B-202ENST00000398020 PLCG1P19174 1290 aa28.25■■■□□ 2.11
TMEM55B-202ENST00000398020 KIZQ2M2Z5 673 aa28.25■■■□□ 2.11
TMEM55B-202ENST00000398020 FAM26DQ5JW98 314 aa28.25■■■□□ 2.11
TMEM55B-202ENST00000398020 AXDND1Q5T1B0 1012 aaPredicted RBP28.25■■■□□ 2.11
TMEM55B-202ENST00000398020 C16orf59Q7L2K0 433 aa28.25■■■□□ 2.11
TMEM55B-202ENST00000398020 MAEAQ7L5Y9 396 aa28.25■■■□□ 2.11
TMEM55B-202ENST00000398020 LRRC15Q8TF66 581 aa28.25■■■□□ 2.11
TMEM55B-202ENST00000398020 MTRQ99707 1265 aa28.25■■■□□ 2.11
TMEM55B-202ENST00000398020 JPH2Q9BR39 696 aaPredicted RBP28.25■■■□□ 2.11
TMEM55B-202ENST00000398020 CCSER1Q9C0I3 900 aa28.25■■■□□ 2.11
TMEM55B-202ENST00000398020 CDHR5Q9HBB8 845 aa28.25■■■□□ 2.11
TMEM55B-202ENST00000398020 CHMP5Q9NZZ3 219 aa28.25■■■□□ 2.11
TMEM55B-202ENST00000398020 SUCLA2Q9P2R7 463 aaPredicted RBP28.25■■■□□ 2.11
TMEM55B-202ENST00000398020 M0QZ92 97 aa28.24■■■□□ 2.11
TMEM55B-202ENST00000398020 DGAT1O75907 488 aa28.24■■■□□ 2.11
TMEM55B-202ENST00000398020 EYA4O95677 639 aa28.24■■■□□ 2.11
TMEM55B-202ENST00000398020 DNM2P50570 870 aa28.24■■■□□ 2.11
TMEM55B-202ENST00000398020 PADI6Q6TGC4 694 aa28.24■■■□□ 2.11
TMEM55B-202ENST00000398020 PANK2Q9BZ23 570 aa28.24■■■□□ 2.11
TMEM55B-202ENST00000398020 ATP6V0A4Q9HBG4 840 aa28.24■■■□□ 2.11
TMEM55B-202ENST00000398020 IL23AQ9NPF7 189 aa28.24■■■□□ 2.11
TMEM55B-202ENST00000398020 TRPV2Q9Y5S1 764 aa28.24■■■□□ 2.11
TMEM55B-202ENST00000398020 RPLP2P05387 115 aaKnown RBP28.23■■■□□ 2.11
TMEM55B-202ENST00000398020 SHC4Q6S5L8 630 aa28.23■■■□□ 2.11
TMEM55B-202ENST00000398020 CELF4Q9BZC1 486 aaKnown RBP28.23■■■□□ 2.11
TMEM55B-202ENST00000398020 TET1Q8NFU7 2136 aa28.23■■■□□ 2.11
TMEM55B-202ENST00000398020 SSBP05455 408 aaKnown RBP eCLIP28.23■■■□□ 2.11
TMEM55B-202ENST00000398020 RFC2P35250 354 aa28.23■■■□□ 2.11
TMEM55B-202ENST00000398020 TXLNAP40222 546 aa28.23■■■□□ 2.11
TMEM55B-202ENST00000398020 NLRP11P59045 1033 aaKnown RBP28.23■■■□□ 2.11
TMEM55B-202ENST00000398020 TPRNQ4KMQ1 711 aa28.23■■■□□ 2.11
TMEM55B-202ENST00000398020 RHPN2Q8IUC4 686 aa28.23■■■□□ 2.11
TMEM55B-202ENST00000398020 KSR1Q8IVT5 923 aa28.23■■■□□ 2.11
TMEM55B-202ENST00000398020 EXOC8Q8IYI6 725 aa28.23■■■□□ 2.11
TMEM55B-202ENST00000398020 GHRP10912 638 aa28.22■■■□□ 2.11
TMEM55B-202ENST00000398020 OSMRQ99650 979 aa28.22■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms